Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01436 ATGTCCTATGAAAGCATAAAAATGTCAATGCTGTTGATAGGTGTTCCACATCTCCGTGATATCTTTTATAGAATGGGCTTGACTGACCAAGATATTGTTGCACTTTCTGGAGGCCATACTCTGGGGAGAGCACACCCAGAGAGATCGGGGTTTGATGGCCCTTGGACAGAGGACCCTCTGAAGTTTGATAACTCATACTTTGTGGAACTTTTGAAAGAAGATTCTGCTGGGCTGCTTAGACTTCCAACTGACAAGGCTTTATTGGAGGATCCTGAATTTCGCCGTTATGTTGAGCTATATGCAAAGGATGAGGATGCATTTTTTCGAGATTATGCTGAATCACATAAGAAACTTTCTGAGCTAGGCTTTGTGCCAAGTTCAAAGCCAATTTCTATTAAGGATGGGACCATACTGGCACAAGGGGCTGTAGGAGTTGTAGTTACTGCTGCAGTGGTGATCCTCAGTTACTTGTATGAAGTTCGCAAAAGAGGGAAGTAGACTTGGATTAGTTCATCTCTCTTGGATGTATCGTTGACATGACCCTGGCCCACGTAATGTGTAAAACAGGGTTCATTTTTGCAGCTTCAGTTTCTTTTTACTTAGTACCAATGAAGAATAATGCTACAAGCCATTCTGACTTTTATATGAATAGACATAGACTTAAAAAATGTCCCTGAATATTCAATTTGAGAGCAATGTAATGATACGTAAATACAAATTTTAGCATATTCCCAGTTGCGTGTTGTTCTCTGAAAGGTAGACATGGTAAAAGAAAAAG 778 0.4023 MSYESIKMSMLLIGVPHLRDIFYRMGLTDQDIVALSGGHTLGRAHPERSGFDGPWTEDPLKFDNSYFVELLKEDSAGLLRLPTDKALLEDPEFRRYVELYAKDEDAFFRDYAESHKKLSELGFVPSSKPISIKDGTILAQGAVGVVVTAAVVILSYLYEVRKRGK 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01436 165 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 15 127 IPR044831 GO:0004601|GO:0034599
Pste1g01436 165 Gene3D Peroxidase, domain 2 13 114 - -
Pste1g01436 165 FunFam L-ascorbate peroxidase, cytosolic 10 115 - -
Pste1g01436 165 SUPERFAMILY Heme-dependent peroxidases 14 123 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 ProSiteProfiles Plant heme peroxidase family profile. 15 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 PRINTS Plant ascorbate peroxidase signature 47 71 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 PRINTS Plant ascorbate peroxidase signature 7 24 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 PRINTS Plant ascorbate peroxidase signature 25 46 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 PRINTS Plant ascorbate peroxidase signature 99 123 IPR002207 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 ProSitePatterns Peroxidases proximal heme-ligand signature. 31 41 IPR019793 -
Pste1g01436 165 PRINTS Haem peroxidase superfamily signature 31 46 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 PRINTS Haem peroxidase superfamily signature 55 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pste1g01436 165 Pfam Peroxidase 15 103 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01436 Pste-Chr1 4537081 4538675 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01436 15 122 Peroxidase AT4G17690 35.211 1.02e-15 71.2