Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01433 GAAAGAGCCAACAGCCACTCTCTTTAACCTGTCTCACCAACTCGCATCTAGAAACAATTAGGGTCTCCCTTCTCTCTCTCTCTTCTGTCCCCTCTCCTTTGGAGTCAAAAGCCTATAAAACCACATCCCAACTCCCTCTTGAGCCGGCTTCTTTGTTGCTGCAATCCAATCACAAATAAAGCAGTAAGCAAATTCACAAATCACAACTCAACTGAATTGCCTCTTAATTATGGGAAGGTCCCCATGCTGTGAGAAGGCTCACACAAACAAAGGTGCATGGACCAAAGAAGAAGATGACAGACTCATATCTTATATTCGAGCTCACGGGGAGGGCTGCTGGCGTTCCCTCCCCAAAGCCGCCGGCCTCCTCCGCTGCGGTAAGAGTTGCCGTCTCCGGTGGATCAACTACCTCCGTCCAGACCTCAAACGTGGCAACTTCACCGAGGAAGAAGATGAACTCATAATCAAACTCCACAGTCTCCTTGGTAACAAGTGGTCTTTGATAGCTGGAAGATTACCTGGGAGAACAGACAATGAAATAAAGAATTATTGGAACACTCACATAAGAAGGAAGCTTTTGAACAGAGGAATTGACCCTGCAACTCATAGACCTCTTAACGAAGCTGCTTCGGCTGCTGCAACTGCAACTGGCACTGCCACTAATATATCTTTTGTTAAACAAGAACAAGAGACAAGTTCTAGTAATGGAAGCGGTAGCGTTATTAAAGGGTCCATCTTAGAACGCTGTCCTGACTTGAACCTTGAGTTAACCATTAGTCCTCCTCGCCAACCACCTCAAAAGAGCCTTTGCTTCGTTTGCAGTTTGGGTTTGCAGAACAGCAAGGATTGCAGCTGCAACGTTGTTAACACTGTCACTACCAACAACACACCTCCTCCTTCTGCTGCCTATGATTTCTTGGGCTTGAAAACCAACGCTGTTTGGGATTGCACCAGCTTGGAAATGAAATGAAATCAATCCACACCAATTAGTTAGTCTTGGTGGAGAGAAGTGAGAGAATCAAATTCGTTAATTTTTGAATTTTCTCTCCTAATTTCTTTTTTTCTCTGATTTGTATAAATAATTAGTTGCTGATGCATAATATATAGTACCGGTACAGATGAACA 1125 0.4418 MGRSPCCEKAHTNKGAWTKEEDDRLISYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLNRGIDPATHRPLNEAASAAATATGTATNISFVKQEQETSSSNGSGSVIKGSILERCPDLNLELTISPPRQPPQKSLCFVCSLGLQNSKDCSCNVVNTVTTNNTPPPSAAYDFLGLKTNAVWDCTSLEMK 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01433 246 CDD SANT 69 112 IPR001005 -
Pste1g01433 246 Gene3D - 68 138 - -
Pste1g01433 246 CDD SANT 16 61 IPR001005 -
Pste1g01433 246 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 151 - -
Pste1g01433 246 SMART sant 66 114 IPR001005 -
Pste1g01433 246 SMART sant 13 63 IPR001005 -
Pste1g01433 246 Gene3D - 14 66 - -
Pste1g01433 246 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Pste1g01433 246 FunFam MYB-related transcription factor 13 66 - -
Pste1g01433 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Pste1g01433 246 FunFam Myb transcription factor 68 137 - -
Pste1g01433 246 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Pste1g01433 246 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Pste1g01433 246 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Pste1g01433 246 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Pste1g01433 246 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01433 Pste-Chr1 4532913 4534139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01433 1 246 MYB Transcription Factor Family AT4G34990 59.124 5.63e-106 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pste1g01433 Myb_DNA-binding 1.9e-14 CL0123