Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01423 CAAAAGTCCAAAGCTGGCCCTCTCTCTCAACTCTTCCCTTGGAAATCCCGATTAAAGCCCTGATATAATAACCTTTAAACCAAACACTTGTGAAAATCCCAAAATATAGCTTTGAAATCATCATACACAACCTCTTTTGTTTTTCTCTTTTACAATGTCAAAGTCTCTGTGTCAACACAATTAATAACCTGCTTGCTTTATTATACGTGTGTATTGTGAAACGGCTTTCACTGGAATTGATGTTTCTTGTTGATTTTGAGGGAATTGAAGTTTTGTAGCTTGGAACAATTGAAATGGATGAAATCCGAACAGAGAAAATCTATGTTGCTGTTGGAAATGATGCTCAGGATGGATATAAGACTTTGAATTGGGCTCTCAAGAAATGGAATTCTCATCCAATTTCCATTGTTATTCTCCATGTGACACACAATTCTTCCAAGGATTATGTCAATACACCATTTGGGAAACTTCCAGCAAGATCTGTGAACGAGGAGAAACTACAAATTCTCAGGAAAGATGAGCAAGAGAAGATCAAGAAGCTGCTTTCCAAGTATATTGCTTTCTGTGGCAAGGTGCCAGCAGAGATTGTTGAAGTTGAGAAATCTGATGAGCCTATACAAAAGCACGTCATAGACCTGATCTTTGGTTTAGGAATAACCAAATTGGTCATTGGATTTTCATTCATGAAGTCATCCATGAAATCCAAAGGTGCAATTAGTGGATTGTTCTATGTTCATCAGCACAAGCCTGGCTTCTGTGATTTATTCATTATTTGCGGAGGAAAACAAGTTTTCCTCAGAGGAAAGAATGATGAGAAAATCATGGAGGATGATCATGGGGCCATGGTTGCCAGAATGAGGGATAAGATAACTTTTAAAGATTGGCTAGACAAATGGTTCAATGACAAAACAAACGACTCACAAGATAGAAGTACATCACTTTCCTCAAGCAATTTGGAGTCCCCTGTGAACCACAATCAGTGGGAATTTTACCTCCAAGAAATTGAAAATTATTATCAAGAGTTGTTGTCATCCAAGTCTGAGGAAGGAAACTGCGGGCTAGATAATGACGACCTGCAGATTGGTCCAATTGAGCCACATGTCACTGAGCAGAACAATTATAATATGAGTGCTGCGGAAAAAATTGAGATCCTGAAAATTAAGCTGAATGAAGCTCAAAAGACCATCCAATTGAAGAGGAAAGAAGTGAAGGAAAATAAAGAGAGACATGCAAAAGCTGAATGGGCAATTTGTTTATGCAAGAGTCGGGGTGAAGAAGTGGAAAGTAGAATAGGGGAAGAGGTGTGTGCAAGAGAAGAGCTGAAGAAGGAATGGGAAGCGGAGAAAGAGCAAAGAGAGGAAATGAGAACGGAGGTTGAAGAGGGAAAGAGGAGGCTGAGGTCCCTGATGGAGGTCCAATCGGAGCTATCAAACAGGCTTGAGATATGGATGGTGGCGAAGACGCGGGCGGAGACGCAGCTGGAGAAGGCGGTTGAGGAGAGGAGAGAGATTGTGATGGAGATTGAGGAGTTGAGGATGCAGAGGGACGTCCTCAAGAGAAGGATCGAGTTCTGCAACGAGAAGGACGCCATCGGAATGGCCGCGAGGCTCGCCGACACTTGCTGCACCTTCAGGGAGTACACCCACCACGAGCTCCGCTTGGCCACCGATAACTTCTCCGACCGCCTTAGGCTGAAGTCCTCTGGAGATTGGACCAATGTCTATAGGGGACGCTTTAACCATTCCACCGTCGCTATCAAGATTCTACCTTCTTTCTCCCTTTTCCAATCCAAGGTTAGGCTTATTGCTGATGTTCGGCATCCTCATCTCGTTGCCATCATGGGCTTTTGCTCCCACCCCACATCCATAGTTTTCGAATACATGCGCAACGGAAGCTTGCGAGACATGCTTTTTTCCAGGACTAAAAACCGTGTCTTAAGATGGCACCACCGAATACGAATAGCCACAGAAGTTTGCTCCGCCCTGGGCTTTCTCAATGAAGCTAAGTCCAGGCCCCTTCTACACTGCCATTTGAACCCATCCAACATCCTCCTAGACCGCAATTTGGTTGCAAAGATCACGGGCTTTGGGCTTCAGGAATGCCATGATGAGCAGTGTAACGCTGAGTCAGATTTGCGGGCCATAGGGGTTTTGTTAACGCATCTTCTGACCGGAAGAAATTGGAGCGGGCTTGTGGAAGAGGTTATGAAAATGGATATGGATAGAGAGGCTTTGGCTACTGTTCTTGATGAGATGGCTGGGCAATGGCCATTGGATCTGGCTACGGAACTTGCCAACCTGGCTGTGAGGTGCATTTCCATGCCTAACTCGGAATTGAGTATTGCAAGGGTGTTAGAGGAACTGAATGAGATAAGGAGAAAGGGGGAGGAAATAGTTGGAAGGGAAGGGCGAAAGGTAGTCCTTGGTGGATGTGTAGATAGAGGGGCTTCCACTGATGTGCCAAGTGTTTTTCTTTGCCCCATACTTCAGGAGCTGATGAAAAATCCACATGTGGCAGCAGATGGATTTTCTTATGAGCTAGATGCAATGGAACATTGGCTGCAGTCGGGGCATGACACATCACCGATGACAAATTTGAGGCTGAAGCATACATTCCTCACCCCGAATCACACTCTTCGTTCCTTGATTGAGGATTGGCAGACCAGCAAATCACTTAAACTCACACACTAGTACCGAATTCTTTTTAGTTCAGTAGATCATATGTACAGATAAATCATGGCTTGAGAATGATTTTTTTGTTCTCGTTATTGTTTAAAATCCACACACTAAGTAAAAATCCACATAGTGTCTTCACAATGGATTTCATCTTTGCAACAGGGATGACAACGAGGGGTTTGACGCTCTCCGTGTCCCATTCCTGCGGGACGAGTTTGGATATAAAAGAGCGAG 2909 0.441 MDEIRTEKIYVAVGNDAQDGYKTLNWALKKWNSHPISIVILHVTHNSSKDYVNTPFGKLPARSVNEEKLQILRKDEQEKIKKLLSKYIAFCGKVPAEIVEVEKSDEPIQKHVIDLIFGLGITKLVIGFSFMKSSMKSKGAISGLFYVHQHKPGFCDLFIICGGKQVFLRGKNDEKIMEDDHGAMVARMRDKITFKDWLDKWFNDKTNDSQDRSTSLSSSNLESPVNHNQWEFYLQEIENYYQELLSSKSEEGNCGLDNDDLQIGPIEPHVTEQNNYNMSAAEKIEILKIKLNEAQKTIQLKRKEVKENKERHAKAEWAICLCKSRGEEVESRIGEEVCAREELKKEWEAEKEQREEMRTEVEEGKRRLRSLMEVQSELSNRLEIWMVAKTRAETQLEKAVEERREIVMEIEELRMQRDVLKRRIEFCNEKDAIGMAARLADTCCTFREYTHHELRLATDNFSDRLRLKSSGDWTNVYRGRFNHSTVAIKILPSFSLFQSKVRLIADVRHPHLVAIMGFCSHPTSIVFEYMRNGSLRDMLFSRTKNRVLRWHHRIRIATEVCSALGFLNEAKSRPLLHCHLNPSNILLDRNLVAKITGFGLQECHDEQCNAESDLRAIGVLLTHLLTGRNWSGLVEEVMKMDMDREALATVLDEMAGQWPLDLATELANLAVRCISMPNSELSIARVLEELNEIRRKGEEIVGREGRKVVLGGCVDRGASTDVPSVFLCPILQELMKNPHVAADGFSYELDAMEHWLQSGHDTSPMTNLRLKHTFLTPNHTLRSLIEDWQTSKSLKLTH 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01423 798 Coils Coil 389 430 - -
Pste1g01423 798 CDD RING-Ubox_WDSUB1-like 723 778 - -
Pste1g01423 798 Coils Coil 277 311 - -
Pste1g01423 798 Pfam U-box domain 722 792 IPR003613 GO:0004842|GO:0016567
Pste1g01423 798 ProSiteProfiles U-box domain profile. 721 795 IPR003613 GO:0004842|GO:0016567
Pste1g01423 798 PANTHER OS02G0152300 PROTEIN 9 786 - -
Pste1g01423 798 ProSiteProfiles Protein kinase domain profile. 462 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01423 798 Pfam Protein tyrosine and serine/threonine kinase 470 607 IPR001245 GO:0004672|GO:0006468
Pste1g01423 798 SUPERFAMILY RING/U-box 719 794 - -
Pste1g01423 798 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 720 796 IPR013083 -
Pste1g01423 798 SMART Ubox_2 725 788 IPR003613 GO:0004842|GO:0016567
Pste1g01423 798 SUPERFAMILY Protein kinase-like (PK-like) 446 676 IPR011009 -
Pste1g01423 798 Coils Coil 340 374 - -
Pste1g01423 798 Gene3D Transferase(Phosphotransferase) domain 1 445 700 - -
Pste1g01423 798 Coils Coil 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01423 Pste-Chr1 4498044 4504406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01423 5 793 U-box Gene Family AT5G65500 50.000 0.0 744
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Pste1g01423 PK_Tyr_Ser-Thr 2e-20 CL0016