Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01415 AGAAAAGTCATCTTAGGAGCCAATCAAAACCATGCAGCTATTCCACACAAACGACAAGAAACTCAAAGATAAAAGGGGCATCCACTTCATTGCAAACATTTCAAACACCTAGATTTCCTTTAAGCCTTACTTTCAATTTTCTCCTCACAATCCTTCTCTCTTGTCTCCATTAACAAGAAAAACCAACACAAAAGTACTATTCCATATAGTTTCCCATTCAAATTGGTTTTGATTTTCAATGGAGGGCAAAAGAAGCTCTGTTCTTCCACCTGGTTTCAGGTTTCACCCCACTGATGAGGAACTAATTGTGTACTACCTTTGTAACCAAGCCACATCAAGGCCATGCCCTGCATCAATCATCCCTGAAGTTGATATCTATAAGTTTGATCCATGGGAATTACCTGATAAAACAGACTTTGGAGAAAATGAATGGTACTTCTTTAGTCCAAGAGAGAGGAAGTATCCAAATGGGGTGAGGCCTAATAGAGCAACCGTTTCTGGGTATTGGAAGGCCACTGGCACTGATAAAGCAATCTATAGTGGGTCTAAACATATTGGGGTGAAGAAGGCTTTGGTTTTTTACAAGGGTAAGCCACCAAAGGGTCTCAAAACTGATTGGATTATGCATGAGTATAGATTAATTGGATCAAGAAGACAAGCCAACAGACAAATTGGATCCATGAGGCTGGATGACTGGGTATTGTGTAGGATATATAAGAAGAAGAACATGGGAAAATCAATGGAAGCAAAAGGGGACTACCCAATAGGCCAAGTCAATCTTACGCCAGCAAACAATGACAGTGGACAAGAAATGGTGAAATTTCCAAGGACTAGTTCCCTTACTCATCTTTTGGAAATGGATTACTTGGGTCCAATATCACATATGTTGTCTGATGGCTCATACAATTCAACCTTTGATTTTCAAATTAACACTGCCAATGGTGGAATAGACCCGTTTGTAAAAGCACAGCCAATTGAAATTCCTAATAACCACTATGCAGCAGATTCAGGAAAGTACCAAGTGAAACAGAATAGCACCATCAACCCCACCATATTTCTGAACCAAGTGTATGATCAGAGAGGATGATATCACAAGAAAAAAAAAATTGGATTATTTGGACTTGACGATAAGCGTCACCAATTAAATAATCCTGAAGATTCTTTGTAGAAATAGATACATATATATATATATGTATATATATATATATATATTACATAGCGTAATGAATTTTCAGTGATATCCAATCAGATAGCTCCCAC 1260 0.3794 MEGKRSSVLPPGFRFHPTDEELIVYYLCNQATSRPCPASIIPEVDIYKFDPWELPDKTDFGENEWYFFSPRERKYPNGVRPNRATVSGYWKATGTDKAIYSGSKHIGVKKALVFYKGKPPKGLKTDWIMHEYRLIGSRRQANRQIGSMRLDDWVLCRIYKKKNMGKSMEAKGDYPIGQVNLTPANNDSGQEMVKFPRTSSLTHLLEMDYLGPISHMLSDGSYNSTFDFQINTANGGIDPFVKAQPIEIPNNHYAADSGKYQVKQNSTINPTIFLNQVYDQRG 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01415 282 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Pste1g01415 282 Gene3D NAC domain 18 166 IPR036093 GO:0003677|GO:0006355
Pste1g01415 282 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Pste1g01415 282 FunFam NAC transcription factor 18 165 - -
Pste1g01415 282 PANTHER NAC TRANSCRIPTION FACTOR 56 9 185 - -
Pste1g01415 282 ProSiteProfiles NAC domain profile. 9 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01415 Pste-Chr1 4480467 4482072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01415 1 216 NAC Transcription Factor Family AT1G69490 66.667 6.09e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste1g01415 NAM 2.9e-39 No_clan