Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01406 CCAGCCCCAGCCCGAGCCCGGATCTTTCGCGGACGTGTTTCAGACAATTTTTCTTCCGCGCAGTGCCAAAAGTCACTTCTCTCCATTATTTTTTTTTTATTTTCCATTTTCTCTCACTCTGTGAAAACTCCCTCTGCCTTTACGCTGAAACTCTTGCCATTATATATAAATCAACTCATGGTGTCTATTCCAAGAGTAACGCCTCTCCAGAGTGCAGAGTCCAGAGTCCAGAAAACGTTTCTCACTTCATTTTGCACCATTTTAATACATCAACAAATGGCTCGTGCGGGTGCCACTAACTGGCTTTCCTTCTCGCTCTCGCCCATGGAAATGCTCCGAACTTCCGAACCACAGTTCCCGCAATACGACGCCGCTTCAGCAACTTCCTCACATCACTACTTCCTCGATAACTTGTACACCAACGGCTGGGGCAACGGGAACCTCAAATCTCAGGTGATGCTGGAGCAGAATCTGAACCACAGCGACGTCAGTTTCGTCGAATCGTCCTCGCAGTCTCAGACCGTCACCCACGCGCCGCCGCCCAAGCTTGAGGACTTTTTCGGCGACTCTTCCGCCGTCATGCGCTACTCCGACAGCCAGACGGAGACGCAGGACTCGTCGCTCACGCACATGTACGACCACCACGGCTCTGCGTACTTCGGCGACCAGCAGGATCTTAAGGCCATTGCTGGATTCCAAGCTTTCTCGACCAACTCTGGTTCCGAGGTTGATGATTCTGCTTCCATTGGAAAAGCGCAAGCCACCGACTTCGCCACTCACTCTATTGAGTCTTCCGTGAATGAGTTCGCTGCGTTCTCCGGCTCCGCCGTCGCAGCCACCGGTACTTTGTCGCTCTCCGTCGCACAGACCTCCGAGAAGGCCGTCGTCGCTGTCGATTCCGATAGCTCGAAGAAGATCGTCGATACCTTCGGACAGCGCACTTCAATTTACAGAGGTGTCACTAGGCACCGATGGACAGGCAGATATGAGGCGCATCTATGGGACAATAGTTGCAGAAGGGAGGGTCAAGCCAGGAAAGGGCGTCAAGGTGGATATGATAAGGAAGAAAAGGCAGCGAGAGCTTATGATTTGGCAGCTCTAAAGTACTGGGGTCCCACCGCTACCACCAACTTCCCTGTTTCCAATTACACAAAGGAATTGGAGGATATGAAACATGTAACAAAGCAAGAATTTATTGCATCATTGCGAAGGAAAAGCAGTGGTTTTTCCAGAGGAGCTTCCATATACAGAGGCGTTACAAGGCATCATCAACAGGGTAGGTGGCAAGCAAGAATTGGCCGTGTGGCTGGAAATAAAGATTTGTACTTGGGCACATTCGCAACTGAAGAGGAAGCAGCAGAGGCGTATGATATTGCTGCCATAAAGTTCAGAGGGGCAAACGCGGTGACCAATTTTGAGATGAGTAGATATGATGTGGAAGCTATAATGAAAAGTTCACTTCCAGTGGGTGGGGCAGCAAAGCGCTTGAAGCTTTCCCTTGAATCAGAGCAGAAAGCTCCTGTGAGCAGCAGTCAGCAGAATCCACAGTGTGCAAACGTGAGTGGCAGCATCAATTTCTCGGCCATTCATCAGCCAATTGCTTCTATCCCCTGTGGAATTCCATTTGATTCTACCACAGCATATTATCACCACAACCTTTTCCAACATTTTCATCCTACCAACGCTGGAACAGCAGCGTCTGCTGTTACGTCTGCCAATGCAACTGGACTTACTCCACTGCCACCACCATCAGCAGCTGAGTTCTTCATTTGGCCTCATCAGTCTTATTGATATAATCAATCTAGAATCATCTTTTGCTAATTTCATGGTTATTCTAACAAATCAAAAGCTATTGATCCTGGCACAGTTTAGTCTTCCGACCCTCCTCTATAATTAACCCATTTAGGCTGCTAAGAAAGAAAAATGAGGTTTTTTGTGTTCGTTAGTCTTAGTTACAGTGGGAAGCTGGAT 1971 0.4871 PAPARARIFRGRVSDNFSSAQCQKSLLSIIFFLFSIFSHSVKTPSAFTLKLLPLYINQLMVSIPRVTPLQSAESRVQKTFLTSFCTILIHQQMARAGATNWLSFSLSPMEMLRTSEPQFPQYDAASATSSHHYFLDNLYTNGWGNGNLKSQVMLEQNLNHSDVSFVESSSQSQTVTHAPPPKLEDFFGDSSAVMRYSDSQTETQDSSLTHMYDHHGSAYFGDQQDLKAIAGFQAFSTNSGSEVDDSASIGKAQATDFATHSIESSVNEFAAFSGSAVAATGTLSLSVAQTSEKAVVAVDSDSSKKIVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQARKGRQGGYDKEEKAARAYDLAALKYWGPTATTNFPVSNYTKELEDMKHVTKQEFIASLRRKSSGFSRGASIYRGVTRHHQQGRWQARIGRVAGNKDLYLGTFATEEEAAEAYDIAAIKFRGANAVTNFEMSRYDVEAIMKSSLPVGGAAKRLKLSLESEQKAPVSSSQQNPQCANVSGSINFSAIHQPIASIPCGIPFDSTTAYYHHNLFQHFHPTNAGTAASAVTSANATGLTPLPPPSAAEFFIWPHQSY 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01406 596 Pfam AP2 domain 415 465 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 Pfam AP2 domain 316 371 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 FunFam AP2-like ethylene-responsive transcription factor 414 475 - -
Pste1g01406 596 PRINTS Ethylene responsive element binding protein signature 455 475 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 PRINTS Ethylene responsive element binding protein signature 317 328 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 FunFam AP2-like ethylene-responsive transcription factor ANT 315 381 - -
Pste1g01406 596 ProSiteProfiles AP2/ERF domain profile. 415 473 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 176 513 - -
Pste1g01406 596 Gene3D AP2/ERF domain 415 475 IPR036955 GO:0003700|GO:0006355
Pste1g01406 596 Gene3D AP2/ERF domain 316 381 IPR036955 GO:0003700|GO:0006355
Pste1g01406 596 SUPERFAMILY DNA-binding domain 315 381 IPR016177 GO:0003677
Pste1g01406 596 SMART rav1_2 415 479 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 SMART rav1_2 316 385 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 ProSiteProfiles AP2/ERF domain profile. 316 379 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 CDD AP2 414 475 IPR001471 GO:0003700|GO:0006355
Pste1g01406 596 SUPERFAMILY DNA-binding domain 414 475 IPR016177 GO:0003677
Pste1g01406 596 CDD AP2 315 381 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01406 Pste-Chr1 4451049 4456241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01406 181 596 AP2-EREBP Transcription Factor Family AT5G10510 58.449 1.37e-168 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Pste1g01406 AP2 2.3e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01406 1 4451049 4456241 Pste7g00306 7 2851009 2857288 PCT