Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01387 CTGCGCACAGTCATGGGAGCTTGAAATACCTTCTACTGGAGTTACTCTTCACTAACAGTTTGGAACATTTTGTTTACCCTTTTAGGTTTGAGACAGACCCAGTATGCTATCTGCCGCGGAGGATCAGAAAGTTTCGAATTTCATTTGAGTGGGCATAACTGAACACAGAGGGCAGTGAAGCGATGCGTAGAACGATAGCATTTCTCGTTCACCCACGATTCCTCCTTCTCTTCCTTGTTCTCTCAATTTTTCTTATTTTCTTGTTTTCTGGATCCACTAATCCGTATGATTATACTACTCCTAAACAGGTTGTTGAGATCCTTGAGGAGAAAACAGAAGAGGAGCCCGAAATTACACACAGAGTATTCTTGGATATCGATATTGACAAACAGCGTTTAGAGGATTGCTATGCAATAACTTCTGCAGGTAGGATAGTTATTGGATTATATGGCCAAGTTGTACCGAAAACTGTGGATTATAAATTATCATTTTGTATGAACCAAGCTTTAGCTTCTTCGGTAGAAAATGCAATGTTTGCAGAAAATTTTAGAGCTTTGTGTACAGGGGGGCAAGGCAAGAATTCAAAAGGCATAAAGCTTCATTACAAAGGAACATCATTTCATAGGATAATATCCGGTTTTGTGATTCAGGGCGGAGACATTTTTCACAATGATGGTAAAGGGTCTGAATCTATTTATGGTGGAACATTTCCTGACGAGAATTTCAAGATTAAACATTCTCATGCTGGCGTTGTTTCTATGGAAAATTCCGGACCTGATTCCAATGGTTCACAGTTTTTCATTACCACAGTGAAGGCCAGTTGGTTGGATGGAGAGCATGTTGTGTTTGGCAGGGTTGTTCAAGGCATGGATTATGTGTATGTAATTGAAGGGGGAGCCGGAACCTACAGTGGAAAACCCAGAAAGAAGGTAGTGATAGCAGACTCTGGGGAGATACCCAAGATCCACTGGGATGAGGAAAGTTGAACTTCTCCTTTTTTGATCGACCACTAGCATGATTGGATTATGGTTTGGCCGGGTTATCTTCGATCTTGATTCTGGGTCTAAAACCATGATTTACAAAATGTAATCCAAAAATGCCAACTTGACTTAAAAAAGAATTAGTAGTTTGTTATTAAAAAAAATACTGAAATCCGGTCTCTTTTACATGTAAGAATCTTAGAAACATATTTGGTATTTTTTAGTCCATTTTATGTTTTTCTGCTCATTGTATTTTTTTCTAAATCATTTTTGTGTATTTATATATTTAACACTTTATATTAACAAAGCCTTTTACTATAGACAAAAGGG 1310 0.3794 MRRTIAFLVHPRFLLLFLVLSIFLIFLFSGSTNPYDYTTPKQVVEILEEKTEEEPEITHRVFLDIDIDKQRLEDCYAITSAGRIVIGLYGQVVPKTVDYKLSFCMNQALASSVENAMFAENFRALCTGGQGKNSKGIKLHYKGTSFHRIISGFVIQGGDIFHNDGKGSESIYGGTFPDENFKIKHSHAGVVSMENSGPDSNGSQFFITTVKASWLDGEHVVFGRVVQGMDYVYVIEGGAGTYSGKPRKKVVIADSGEIPKIHWDEES 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01387 267 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 79 255 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 141 158 IPR020892 GO:0003755|GO:0006457
Pste1g01387 267 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 79 257 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 60 258 - -
Pste1g01387 267 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 110 258 - -
Pste1g01387 267 Gene3D - 46 116 IPR029000 -
Pste1g01387 267 Gene3D - 117 262 IPR029000 -
Pste1g01387 267 SUPERFAMILY Cyclophilin-like 76 258 IPR029000 -
Pste1g01387 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 110 125 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 158 IPR002130 GO:0000413|GO:0003755
Pste1g01387 267 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 204 216 IPR002130 GO:0000413|GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01387 Pste-Chr1 4408487 4413495 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01387 119 255 U-box Gene Family AT5G67530 43.478 1.68e-23 97.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01387 1 4408487 4413495 Pste1g01387 1 4408487 4413495 ECH