Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01355 ATGGCTTCCCTGTATGATGTGCTTGGAATTTCCGTGGGTGCAAGCTGCGTGGAAATAAAGGCTGCTTACAGAAAGCTGGCAAGAACATACCATCCTGATGTTGTGGCCATGAATCAGAAGGAAACCTCAGCTAACCAATTCATCATCATCCATTCTGCTTACTCAACGCTCTCTGACCCACACAAACGTGCTCAATATGATACACAATTCAAATCAATGCTCGCAACAACTCAAGATAGTAATAAATACGAGTTGGGCACTCAGCTTCAGCCACCCTCTCCGCCGTACAACTTCGAACACGACGGAACAGTGTATAGATCAATGACGTCCTTTCTCTCTTGATCTTTTTCAGCAACAACAATCAGAAAGGGATGCTTGCCTAAAAGGCTAAAAGATACATCTATGCAATAAAAGGGTAAAAGCCAGCTAGCAAATGATGCGCA 443 0.4379 MASLYDVLGISVGASCVEIKAAYRKLARTYHPDVVAMNQKETSANQFIIIHSAYSTLSDPHKRAQYDTQFKSMLATTQDSNKYELGTQLQPPSPPYNFEHDGTVYRSMTSFLS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01355 113 Gene3D DnaJ domain 1 89 IPR036869 -
Pste1g01355 113 PRINTS DnaJ domain signature 5 23 IPR001623 -
Pste1g01355 113 PRINTS DnaJ domain signature 62 81 IPR001623 -
Pste1g01355 113 PRINTS DnaJ domain signature 42 62 IPR001623 -
Pste1g01355 113 PRINTS DnaJ domain signature 23 38 IPR001623 -
Pste1g01355 113 ProSiteProfiles dnaJ domain profile. 3 70 IPR001623 -
Pste1g01355 113 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Pste1g01355 113 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 2 79 - -
Pste1g01355 113 Pfam DnaJ domain 4 67 IPR001623 -
Pste1g01355 113 SMART dnaj_3 2 62 IPR001623 -
Pste1g01355 113 SUPERFAMILY Chaperone J-domain 2 83 IPR036869 -
Pste1g01355 113 CDD DnaJ 5 59 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01355 Pste-Chr1 4292549 4293340 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01355 5 74 C2H2 Transcription Factor Family AT1G74250 41.892 1.43e-09 52.4