Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste1g01354 | GTGAGTGGCCCTATTCCTTGTCGCCTCCAAACCCGTACCAGAAGGCCTATAAATTCAGAGACACCCCAGTTCATTTTTTCTTCACTCATCTACTCCACATTGTCTCTCACCACAACAATTCAAGCTTCTATGTCAAAGAAAATGGCTCAATTTTGTTTCCTCTTGGTGGGGCTTCTCACAATGTTCTCCTCTGCCTATGGGTATGGATATGGTGGTGGTTGGGTTAATGCACATGCAACCTTCTATGGAGGAAGTGATGCATCAGGAACAATGGGTGGGGCTTGTGGATATGGGAACCTCTACAGTCAAGGGTATGGAACAAACACTGCTGCTCTGAGCACTGCTTTGTTCAACAATGGTCTAAGTTGTGGCTCATGCTATGAGATAAGGTGTGTGAATGACCACAGGTGGTGCTTGCCTGGCTCCATTATGGTCACTGCCACCAATTTCTGCCCTCCAAACAATGCCTTACCCAACAATGCAGGGGGATGGTGCAACCCTCCTCTTCACCATTTTGACCTCTCTCAGCCTGTGTTCCTGCGCATTGCACAGTACAGAGCTGGAATTGTGCCTGTGTCTTACCGAAGGGTACCCTGTAGGAGAAGGGGAGGCATAAGGTTCACAATAAATGGCCACTCCTACTTCAACTTGGTCCTGATAACAAATGTAGGAGGTGCTGGGGATGTGCATAGTGTGGCCATTAAAGGTTCCAGAACTGGATGGATGCCAATGTCAAGAAACTGGGGTCAGAACTGGCAGAGCAACAACTACCTCAATGGCCAAAGCCTCTCATTCAAGGTCACAACGAGTGATGGCCGTACTGCTGTGTCCTACAATGTTGCCCCAGCAGGATGGTCCTTTGGCCAAACCTACTCTGGTGCTCAATTCCGCTAGAGACCACAATTATCCCAAGTTCAACTTCCAAGTTCCAAATATATATTTAGATACATTACATATAGTATGTTCTTATAATTTCTCAATTTTTAAGTGTCAGTATATGACTCAATAGTATACTAGGGTATTAAAATAGTATGCTACTTGGTGGAGGGCATTCTAGGGACACTAAGTGATCGAGGGCTTATTTTAAAGTGGCTCTTTATTCATTTTGATTGGGGTCAAAGGGGGATTCTAATTCTTAGGCCTTCTTGATTATATGGGTATTTTTATTTCTAATTTTTTTTTAGAAGCTTTTTCAACCTTTCTGCCGCTGAAAGCTAGCAGACTGGAGTTTCTATATTTTATATTTGTGAAATTGTAACCTACTAAATTGGAGGAGGTGGAATTGTTGTATTGTACCACCCGCCATTAGTATTGGGAAGTTTTTGGGTCCCTATTGGGATTGTTAGAAGTATTGTTTGCTTACTCATCAGTTGTAAGCAACCTTGGGTAAGTATGTCTTTGGTTGTACTGGAAGTGTAAATGTTCCTATTTCTTCATGTAATGGAAAGTTGCAGTTATTTACTA | 1464 | 0.4303 | VSGPIPCRLQTRTRRPINSETPQFIFSSLIYSTLSLTTTIQASMSKKMAQFCFLLVGLLTMFSSAYGYGYGGGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGSCYEIRCVNDHRWCLPGSIMVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFLRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSVAIKGSRTGWMPMSRNWGQNWQSNNYLNGQSLSFKVTTSDGRTAVSYNVAPAGWSFGQTYSGAQFR | 297 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste1g01354 | 297 | PANTHER | EXPANSIN-A15 | 51 | 296 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | FunFam | Expansin | 204 | 296 | - | - | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 279 | 295 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 162 | 179 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 179 | 192 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 250 | 271 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 143 | 153 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 131 | 142 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 104 | 118 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 203 | 215 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin signature | 215 | 236 | IPR002963 | GO:0009664 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 113 | 131 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 91 | 109 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 187 | 203 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 279 | 293 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 73 | 88 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | PRINTS | Expansin/Lol pI family signature | 241 | 255 | IPR007118 | GO:0005576 | |
Pste1g01354 | 297 | SUPERFAMILY | Barwin-like endoglucanases | 73 | 222 | IPR036908 | - | |
Pste1g01354 | 297 | Gene3D | - | 204 | 296 | IPR036749 | - | |
Pste1g01354 | 297 | Pfam | Lytic transglycolase | 109 | 194 | IPR009009 | - | |
Pste1g01354 | 297 | Gene3D | - | 63 | 200 | IPR036908 | - | |
Pste1g01354 | 297 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 92 | 204 | IPR007112 | - | |
Pste1g01354 | 297 | FunFam | Expansin | 63 | 200 | - | - | |
Pste1g01354 | 297 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 214 | 293 | IPR007117 | - | |
Pste1g01354 | 297 | CDD | DPBB_EXPA_N | 74 | 199 | - | - | |
Pste1g01354 | 297 | Pfam | Expansin C-terminal domain | 205 | 282 | IPR007117 | - | |
Pste1g01354 | 297 | SMART | dpbb_1 | 109 | 194 | IPR007112 | - | |
Pste1g01354 | 297 | SUPERFAMILY | PHL pollen allergen | 201 | 292 | IPR036749 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste1g01354 | Pste-Chr1 | 4290110 | 4292388 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste1g01354 | 48 | 297 | Expansin Gene Family | AT2G03090 | 82.000 | 7.51e-152 | 423 |