Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01344 ATGGCTGACTTATTCTTTCTTCATTGCAATTGCCGTCCTTTCTCTCTCTACAATGCCTTTGACCTTTTGCAAAATCACACGCTCTCTATCACCAACACGCTTCTTTCTCTTCTTCAGCCACCACCACCACCGTTTCACCACCACCACAACGTGACCCTTTTGTTTTATCACCTTTCTCAACGTGCCACCCAGCTGAAAACACCACCACTTTGTCTCTGGGGTCAATTCCCACCACCTTCATTTCCCTTCACAGCCCTGACAGGAACACAATCCTGTGTGATATACGACGTTGGAGCCTCTCATGTTTTGTTTTTGGATCATGGTTCTGAGTCAGATATTTTAAGGACCACGGTGATGGACCCGAAAGCCCCATTTGAGAATTCATCAAATTTGGAATCTTTGGTGTTGAATTCGTCATCATGTAGAAGTGGGGTGTCTGTTCAGACTAGGGGTTCTGATAGGAACAGCTCCATCAGGGAAGTGAGTTTTGGCCACTCAGGATCCAAGCCTGTGAGGTATGGGTCAAAGGGTGCTGATTCTGAAGGATTTAGCATGTCTCAGAAGGAAATCAGTGATGAGGATGCAAGGTTGATTTATGTTGATGATCCTGATAAGACAAATGAAACGCTTGCATTTGCAGGAATTCAATTCAGACGGGAACTTCCTCAGTTGGCTGTTTTCGGGAGGGGTGTTTCCATTTTGCCATTGGCCTTTGTGCTTCTTGTTACTGCTGTGAAGGATGCATTTGAGGACTGGAGGAGGCACAGGTCAGACAAAATTGAGAACAACAGGTTAGCATTGGTTTTGGTTAATGGTCAATTTCAACAGAAGAAGTGGAAGGATGTTAGAGTTGGGGAGATTATTAAAATCAGTGCGAATGAGACAATTCCTTGTGATATTGTGTTGCTCTCTACTAGTGATTCTACTGGGGTTGCATATGTGCAGACTATTAATCTGGATGGAGAGTCTAATTTGAAGACTAGGTATGCAAAACAAGAGACTCAATCTAAGTTTCCTGAAAAAGAGAGGTTTAATGGGTTCATTAAGTGTGAAAAACCCAATAGGAATATATATGGGTTTCAGGGTTATATGGAAGTTGATGGAAAAAGGTTGTCTCTTGGATCATCCAACATTGTTATTAGAGGTTGTGAGCTCAAGAATACTAATTGGGCACTTGGTGTTGCTGTGTATTGTGGCCATGAGACCAAAGCTATGCTCAACAGCTCCGGAGCTCCATCAAAAAGAAGTCTTCTTGAGACTCGCATGAACTCTGAGATCATCATGCTTTCTTTCTTTCTTGTAGCTTTGTGTGCAGTCACCTCAGTTTGTGCTGCTGTTTGGTTGAAGCGCCACAAGGATGAGTTGAAGCTCTCTCCATATTATAGGAAGCTGGATGTTTCAGAGGGGAAAGAGGAAAGCTATAAATATTATGGATGGGGACTGGAAATTCTTTTCACTTTCCTCATGTCAGTTATAGTGTACCAGGTTATGATCCCTATATCCTTATACATTTCCATGGAACTTGTTCGAGTTGGTCAGGCATACTTCATGATTGGAGACTCAAGAATGTTGGATGAGGCGACAAATTCAAGATTTCAGTGCAGGGCTTTGAATATTAATGAAGATTTAGGCCAAATTAAATATGTGTTTTCTGACAAAACTGGCACTCTAACTGAGAACAAGATGGAGTTTCAATGTGCGAGCATCTTGGGGTTTGATTACAGTTCTGCAAAATCTAGTCTCGAGAATGAGCAAGTTGAATACTCTATTCAAGTGGATGGAAAGGTCTTTAAGCCAAATATGATGGTGAAAGTTAATCAAGAGCTTTTCCAATTATCAAAAGGTGGATTTTCAAATAGAGAGGGGAAACAGATTTTTGATTTCTTTCTAGCATTGGCAGCCTGCAATACCATTGTGCCTCTTGTTGTTGACACATCTGACCCTACTGTCAAGCTGATAGATTACCAAGGGGAATCCCCAGATGAACAAGCATTGGCTTATGCTGCTGCCGCCTATGGTTTTATGCTTATTGAACGAACCTCAGGTCACATAGTCATTGATATTCATGGAGAAAGACAAAGGTTCAATGTCTTGGGTATGCATGAATTTGATAGTGATAGGAAGAGGATGTCGGTTATATTGGGGTACAATGACAATTCTGTGAAACTTTTTGTTAAGGGGGCAGATACATCTATGCTTAGTGTGATAGACAAATCATTGAACACAGATATACTACAAGCAACTGAAACCCATCTTCACTCCTATTCCTCTGTGGGTTTGAGAACACTTGTTATTGGCATGCGAGACTTGAATGCTTCAGAATTTGAGCAATGGCACTCAGGCTTTGAGGCAGCAAGTACAGCTTTGATTGGTAGGGCCGCCAGGCTTCGCAAGGTTGCTATCAATGTAGAGAACAATCTGTGCATATTAGGTGCAACTGCTATTGAAGATAAACTGCAGCAAGGTGTGCCAGAATCTATTGAGTCTCTAAGGACTGCAGGTATTAAAGTGTGGGTGTTAACTGGGGACAAACAAGAAACTGCCATATCAATCGGATACTCCTCAAAGCTCCTAACAAGTGACATGACTCAAATTATAATCAATACTAACAATAGAGAGTTGTGTAGAAGACGCTTGCAAGATGGCCTTGTCATGTCTAGAAAACACATGTCTGTGCCTGGGGTTACTCACAATTCTGAAGGAAGTTCAGATGCTGTTTCAATTCCGTTAGCCTTGATTATTGATGGTACCAGCCTTGTTTATATTCTTGACAGTGAGCTCGAAGAACAGCTCTTTCAACTTGCAAGTAGATGTTCTGTTGTTCTCTGTTGTCGTGTGGCTCCGCTGCAGAAAGCTGGGATTGTAGCCCTTGTGAAGAAAAGGACAGATGACATGACACTAGCCATTGGAGATGGTGCTAATGATGTATCAATGATCCAAATGGCTGATGTTGGAGTTGGAATCAGTGGACAGGAGGGTCGGCAAGCGGTAATGGCTTCTGATTTTGCAATGGGGCAGTTTAGATTTTTAGTTCCTCTCTTGTTGATACATGGACATTGGAATTACCAACGATTGGGTTACATGATAATATACAACTTCTACAGAAATGCTATCTTTGTTCTTGTCCTATTTTGGTATGTGCTCTTCACTGCCTTTGCTTTGACAACTGCTATAAACGAATGGAGCAGCATGTTATATTCAATAATCTACACTGCACTGCCAACTATTGTTGTTGGAATTCTTGACAAGGATCTTAGTAAAAGGACTCTTCTAAAGCATCCTCAGCTTTATGGGGCAGGGCTGAGACATGAGGCCTACAACAAAAAGTTGTTTTGGTTAGCAATGGCTGATACTTTGTGGCAAAGCATTGCTGTTTTCTTTACTCCCCTCATTGCATATTGGGGAAGTACTATAGATGTAGCTAGCATAGGAGATCTTTGGACTCTTTCAGTGGTTATTTTGGTTAATTTGCACTTGGCCATGGATGTCATCAGGTGGAATTGGATTACTCATGCAGCCATTTGGGGCTCTATTGTTGCAACTTTCATCTGTGTCATAATTATTGATGCTATACCAGCCTTTCCTGGTTACTGGGCTATCTTTGATGCTGCAAGCACTGCATTGTTCTGGTTATGTTTGCTTGGAATTCTGATAGCCGCATTACTTCCACGATTAGTTGTAAAATATATTCATCAGTATTATTTTCCCAATGACATTCAGATTTCAAGGGAAACTGAGAAATTTGGAAATCCAAGAGACAATGGTGGTGGACAGATAGAAATGCTTCCTGTTTCAGATGCTCCACCAAGATAACATAAGCTAGTTTGTTCCCTTTATACAACACATTTCTTTTGTAAAGTTACATATTCTTTAGGCTACGTCAGAGTATTTCTGTTGGTTGCCAGATTTCATTGTTTTCTATCCAAAGGGATAGAGCTTTTGTTTTCAATTCAGAGGCTGCTGGTTTGTTATTCCTTTGTGTTGATAAATTAGCATGTTGTAAATTAACAATTGTTATAGCAGATAAAGAAAAAGGTTGATCACATGTTCTAAAGTAAATTTTTACATGAAGAGTTTGATGATGCCAAATATTTGCCTTGCATTGTTCATTTTTGTAGTTTTTTTTTAACTATGTTATTTGTACAAAGTATTTATTAACTTTGTTGATGACTAATTTTTGTTGAAAAAACTTGACTAACCATCTTTAGTGGAATTTCTATTCCCAACTACATTTTCTCCATCTACAAGG 4249 0.4032 MADLFFLHCNCRPFSLYNAFDLLQNHTLSITNTLLSLLQPPPPPFHHHHNVTLLFYHLSQRATQLKTPPLCLWGQFPPPSFPFTALTGTQSCVIYDVGASHVLFLDHGSESDILRTTVMDPKAPFENSSNLESLVLNSSSCRSGVSVQTRGSDRNSSIREVSFGHSGSKPVRYGSKGADSEGFSMSQKEISDEDARLIYVDDPDKTNETLAFAGIQFRRELPQLAVFGRGVSILPLAFVLLVTAVKDAFEDWRRHRSDKIENNRLALVLVNGQFQQKKWKDVRVGEIIKISANETIPCDIVLLSTSDSTGVAYVQTINLDGESNLKTRYAKQETQSKFPEKERFNGFIKCEKPNRNIYGFQGYMEVDGKRLSLGSSNIVIRGCELKNTNWALGVAVYCGHETKAMLNSSGAPSKRSLLETRMNSEIIMLSFFLVALCAVTSVCAAVWLKRHKDELKLSPYYRKLDVSEGKEESYKYYGWGLEILFTFLMSVIVYQVMIPISLYISMELVRVGQAYFMIGDSRMLDEATNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASILGFDYSSAKSSLENEQVEYSIQVDGKVFKPNMMVKVNQELFQLSKGGFSNREGKQIFDFFLALAACNTIVPLVVDTSDPTVKLIDYQGESPDEQALAYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGMHEFDSDRKRMSVILGYNDNSVKLFVKGADTSMLSVIDKSLNTDILQATETHLHSYSSVGLRTLVIGMRDLNASEFEQWHSGFEAASTALIGRAARLRKVAINVENNLCILGATAIEDKLQQGVPESIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTSDMTQIIINTNNRELCRRRLQDGLVMSRKHMSVPGVTHNSEGSSDAVSIPLALIIDGTSLVYILDSELEEQLFQLASRCSVVLCCRVAPLQKAGIVALVKKRTDDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLIHGHWNYQRLGYMIIYNFYRNAIFVLVLFWYVLFTAFALTTAINEWSSMLYSIIYTALPTIVVGILDKDLSKRTLLKHPQLYGAGLRHEAYNKKLFWLAMADTLWQSIAVFFTPLIAYWGSTIDVASIGDLWTLSVVILVNLHLAMDVIRWNWITHAAIWGSIVATFICVIIIDAIPAFPGYWAIFDAASTALFWLCLLGILIAALLPRLVVKYIHQYYFPNDIQISRETEKFGNPRDNGGGQIEMLPVSDAPPR 1270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01344 1270 Gene3D - 240 407 - -
Pste1g01344 1270 Gene3D - 806 1009 IPR023214 -
Pste1g01344 1270 CDD P-type_ATPase_APLT_Dnf-like 216 1129 - -
Pste1g01344 1270 PRINTS P-type cation-transporting ATPase superfamily signature 851 861 - -
Pste1g01344 1270 PRINTS P-type cation-transporting ATPase superfamily signature 969 988 - -
Pste1g01344 1270 PRINTS P-type cation-transporting ATPase superfamily signature 550 564 - -
Pste1g01344 1270 SFLD C1.7: P-type atpase like 534 1020 - -
Pste1g01344 1270 Gene3D - 651 787 IPR023299 GO:0000166
Pste1g01344 1270 Pfam Cation transport ATPase (P-type) 658 734 - -
Pste1g01344 1270 NCBIfam HAD-IC family P-type ATPase 482 571 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste1g01344 1270 NCBIfam HAD-IC family P-type ATPase 940 1053 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Pste1g01344 1270 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 556 822 IPR023299 GO:0000166
Pste1g01344 1270 FunFam Phospholipid-transporting ATPase 806 1009 - -
Pste1g01344 1270 SUPERFAMILY Calcium ATPase, transmembrane domain M 228 1236 IPR023298 -
Pste1g01344 1270 FunFam Phospholipid-transporting ATPase 654 787 - -
Pste1g01344 1270 MobiDBLite consensus disorder prediction 146 163 - -
Pste1g01344 1270 MobiDBLite consensus disorder prediction 146 185 - -
Pste1g01344 1270 Pfam Phospholipid-translocating P-type ATPase C-terminal 997 1237 IPR032630 -
Pste1g01344 1270 Pfam E1-E2 ATPase 266 505 - -
Pste1g01344 1270 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 219 1247 - -
Pste1g01344 1270 ProSitePatterns E1-E2 ATPases phosphorylation site. 552 558 IPR018303 -
Pste1g01344 1270 SFLD p-type atpase 534 1020 IPR044492 -
Pste1g01344 1270 SUPERFAMILY HAD-like 537 1010 IPR036412 -
Pste1g01344 1270 SUPERFAMILY Calcium ATPase, transduction domain A 263 404 IPR008250 -
Pste1g01344 1270 FunFam Phospholipid-transporting ATPase 238 407 - -
Pste1g01344 1270 NCBIfam phospholipid-translocating P-type ATPase 212 1244 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
Pste1g01344 1270 MobiDBLite consensus disorder prediction 1246 1270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01344 Pste-Chr1 4260128 4266591 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01344 119 1270 Primary Pumps ATPases AT5G04930 65.712 0.0 1612