Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01341 GGCTTACCTAAGTCCTTTGCAAGATCGACAATTCAAAATCTGTGGCTCAATAATCAGAAAGATGGGTTTGGATTTTCTTGTTCCATTCATGTTATTTCTTCCATGCCACACTTATCTCAAGCATGGCTTCAAACGAATCAGTTCTCAGGTCCTATTCCAGATTTGTCAAACTGTACCTTTTTATTTGATTTGCAGCTTCGAGACAACCAATTAACCGGTGTAGTTCCACATTCTTTGATGTCCATGCCTAGCTTGCAGAACATTTCTTTGGACAACAACATGCTTCAAGGTCCTGTTCCCTCATTTGGAAAAAATGGAGCAATAATTTTTGTCAAAAAAATGTTGGACCTTGCGATTCTCGTGTCTCAATTTTTTGCTGCAAATTTTGGGTATCCCCTTCAGTTGGCACGTTCTTGGACCGGGAATGATCCTTGTCAAGATTGGAATTTCATTGTGTGTGTGAATGGGAAGATTGTTACAGTGAATTTGGCGAAGCAGAATTTGACAGGTACCATTTCACCTGCATTTGCCAATTTAACTGATTTGAGGAACTTATATCTCAGTGATAATACTTTGGTTGGTTCAATACCAAGAAACTTGGAAAATTTAGCTCAACTTGAGATGTGTCTAATAACAACCTACCTGGCGATAACCAAAGTGAAGTTAAAGACTTTTGGCAATGTTTTGCTTGGGCATTCTAAAAGTAGTGGCGAAGGTCGAAACGTAACATCAAGTGGTTCCTCACTTTCACCTGCTTGGATCGCAGTGTTGGTGATTGTCTTTCGCATGTGCCATGCAAAAAAGCAACGTGGGAAAATGGGAAGGGTTAATAATCTAGAAAATGGAAAAGGAAAAGGAAGTGTTCTGAGTTTTGAGGGTGGAAGTGTTACCTTGCCAATCCAGGTTCTTAGGCAAGTAACAAATAATTTTAGTGAAGAAAACATTTTGGGTAGGGGAGGATTTGGAGTTGTTTACAAAGGTGAATTGCATGATGGAACTAGAATTGCCGTGAAAAGGATGCAATCTAGTGTAATGGGAAGTAAGGGAATAAATGAGTTCCAAGCAGAGATTATGTTTCTGAGTAAAGTCAAGCATAGGCATTTGGTGGCTCTTTTAGGATATTGCATTAACGACAGTGAAAAACTTTTGGTGTATGAGTTTATGCCCCAAGGGACATTAACACAACATTTATTCTATTGGCGTCAAAATGGCTGTGCTCCTTTGACTTGGAAACAAAGGGTAACAATAGCTTTGGATGTAGCACGAGGAGTGGAATACTTGCACAGCTTAGCTCAGCAAAGCTTCATTCACAGGGACTTGAAACCCTCAAACATATTATTGGGTGATGACATGAGAGCAAAGGTTGCAGATTTTGGTTTGGTGAGAAATGCACCAGACGGGAAGGATTTTGAAGAGACACGAGTGGCTGGAACATTTGGATACCTGGCACCTGAATATGCAGCAACTGGAAGAGTGACAACTAAAGTAGACGTGTATGCATTTGGAATAGTTTTGATGGAATTGATTACAGGTAGAAAGGCATTACACAATACTGTGGCCGAAGAAATGTCTCACTCGGTTTCATGGTTCCGTGCAATACTAAGTAACAAGGAAAACATTACCAAGGTAACTGATCAAACTCTTAATCATGATGAAGAAACCATGGAAAGCATATATAAAGTGGCTGAACTAGCAGGACATTGCACTGGTCCTGAACCATACCAAAGGCCAGATATGGGAAATGTAGTGAGTGTCTTGGTTCCCTTGGTAGACCAATGGAAGCCTAACACTCATGCACAATATGACAACTTTAATGAAGGCACTTCAGCAATGTCTGATAATGATATGTCCTTCTCAGAAATTCAATATGGTCGT 1875 0.4005 GLPKSFARSTIQNLWLNNQKDGFGFSCSIHVISSMPHLSQAWLQTNQFSGPIPDLSNCTFLFDLQLRDNQLTGVVPHSLMSMPSLQNISLDNNMLQGPVPSFGKNGAIIFVKKMLDLAILVSQFFAANFGYPLQLARSWTGNDPCQDWNFIVCVNGKIVTVNLAKQNLTGTISPAFANLTDLRNLYLSDNTLVGSIPRNLENLAQLEMCLITTYLAITKVKLKTFGNVLLGHSKSSGEGRNVTSSGSSLSPAWIAVLVIVFRMCHAKKQRGKMGRVNNLENGKGKGSVLSFEGGSVTLPIQVLRQVTNNFSEENILGRGGFGVVYKGELHDGTRIAVKRMQSSVMGSKGINEFQAEIMFLSKVKHRHLVALLGYCINDSEKLLVYEFMPQGTLTQHLFYWRQNGCAPLTWKQRVTIALDVARGVEYLHSLAQQSFIHRDLKPSNILLGDDMRAKVADFGLVRNAPDGKDFEETRVAGTFGYLAPEYAATGRVTTKVDVYAFGIVLMELITGRKALHNTVAEEMSHSVSWFRAILSNKENITKVTDQTLNHDEETMESIYKVAELAGHCTGPEPYQRPDMGNVVSVLVPLVDQWKPNTHAQYDNFNEGTSAMSDNDMSFSEIQYGR 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01341 625 ProSiteProfiles Protein kinase domain profile. 310 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01341 625 Gene3D Ribonuclease Inhibitor 1 118 IPR032675 -
Pste1g01341 625 MobiDBLite consensus disorder prediction 605 625 - -
Pste1g01341 625 CDD STKc_IRAK 316 589 - -
Pste1g01341 625 Gene3D Transferase(Phosphotransferase) domain 1 388 615 - -
Pste1g01341 625 Gene3D Phosphorylase Kinase; domain 1 273 387 - -
Pste1g01341 625 Pfam Protein kinase domain 311 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01341 625 FunFam receptor protein kinase TMK1 273 387 - -
Pste1g01341 625 SUPERFAMILY Protein kinase-like (PK-like) 288 597 IPR011009 -
Pste1g01341 625 ProSitePatterns Serine/Threonine protein kinases active-site signature. 435 447 IPR008271 GO:0004672|GO:0006468
Pste1g01341 625 Gene3D Ribonuclease Inhibitor 122 230 IPR032675 -
Pste1g01341 625 FunFam PTI1-like tyrosine-protein kinase 3 388 599 - -
Pste1g01341 625 SUPERFAMILY L domain-like 23 207 - -
Pste1g01341 625 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Pste1g01341 625 PANTHER OSJNBA0070M12.3 PROTEIN 2 602 - -
Pste1g01341 625 FunFam Leucine-rich repeat receptor-like kinase 117 214 - -
Pste1g01341 625 SMART serkin_6 310 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01341 Pste-Chr1 4251467 4253979 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01341 252 586 Receptor kinase-like Gene Family AT4G02010 43.402 1.20e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pste1g01341 Pkinase 2.2e-47 CL0016