Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01340 GAAAAAACGGAAGAAAATTTATTATAATATAATTGACGCTGCAATTAATTTTATTTTTATTTTATTTTACAGAGTATAAACAAATACAGAGAGATTGTTTTGTTTTATGAAATTGTGTTTGTGTGTGAAATTTGCATGCTCTTCTTCATCTCATTTCTGAACCTTTCATTTTGAATCTCCATTTGGTGGATCGTCACAGATAGGTACTCTAAACTCTCATTCTCGTCAATTTCCAAGACGCTGATTTCTGCGACCCCCAATCACTTCGCATGTTTCTCATCGGAATTTGCCTAACGCAAGCTGAATCTGAAAAAAATTGTCAAACAATCTATGATTCAGAACACTGATATGAGAGTTGAATCGGGAACGTGCAATGTGTGTTCGGCTCCTTGTTCATCTTGCATGCATCTTAACCATGCTCTCATGGGGTCAAAGGCTGAAGAGTTTTCTGATGAAAACTGTCGCGTAGGGGAGACTAACGATCAATATTCTATGGATGTGGATAATGCATATTCTCTTAGAAGCAGAGTTTGTGAAAGCTCACAGCACACTGTCAGTGAAGCAAGTAATATGCAGAGTGTTAATTCTAGTCATGATGCTCTGTCTGAAAATGCAGAGAGTAACCAGATCACAGTGAATAAGTATCAGGATTCCAATCAGTTAGAAGCTGATGATGACAACACTTCTTGTATTAATAGAGCCAGTGATGTTAATTTAGTGAATGGTGGCCATCAAAGGAATGAGGAGAGAATGATAATGCATGTGGAAAGGGATTCATGTTCTCATGTCCCAGAAAAATTGTCAGAATGCTCCATTGAGAATTCTAGTTCACCATTGACCAAAAAGAGGGAACCTGTTGTCTCTGGAGAGAAATGTATTGTTGTTAAGGATGGCCTTATTGAGAGTACTTCCAAGATTCCACTAAAGGTATGTCCAAAGTCAGAAGCAGATACTGATGTCTGTGATGCTAACACTGAAGATCCTAAATGTTCAGTTCAAGTTGGACAGCTTGAGAAAGCTGAAGAGCTGGTTAAATCACCTGGCAAGCAGGAACCTCAATCTGAAGATGAGAGTGATGAATCAGATGTTGTGGAACATGATGTAAAGGTGTGTGATATATGTGGAGATGCTGGTCGTGAGGATCTACTTGCCATATGTAGTAGGTGCAGTGACGGTGCAGAACATACCTACTGCATGCGAGAAATGCTTGAGAAAGTCCCTGAAGGAGATTGGTTATGTGAAGAATGCAAGGATGCTGAGGAGAATGAAAATAAAAGACTGGATGTTGAAGACAAAAAAATGGTTGAAGTTAGTTCAACCTCACAAGTTTCTGTCAAAAGAATTTCTGATAACATTGAAGTAGCTCCAGCAGCAAAAAGACAATCTCTTGAATCAAGTACAGGATCACCAAAGACGTCAAGTCCCAAGAGATTAGTTCCACTGTCACGAGAATCTTCATTTAAGAGCTTAGATAAATCAAAAGTGAAGCCTGCTCTTCTGATACCCATTCGGAACCACTCTGGTGGTAATGACACAGAGATAGCTCGCTCTGCTTCCATAGGTCCTCGGGCTCAAAATCAAAAGAGTTTGTTGAAGTCTAGTTCATTCAACAACATAAATTCCAAGCCAAGAGTCAAACTTGTTGATGAAGTTGTTCCCCAAAAATCAAAAGGGGGTAGTGAACATACTTCAAAGAACGTGGAGATGCCTTCTCGGATAACTGGCAAATCAACATTATTCAAATCCTCAAGTTTAGGGCGATCAAATGCAGCGGAATCAAAAGTTAAAATGCTTTCGCCCAAGTCTGTAACTACTCAGGATTCAAAAGGATCTAGACATTTAAAAGAATCAGGTGCATTTGACAGGAAATTTCCATCTAGGATTGATCGGCCTGTGGCTAGTTCTGTCGTTTCCACGCCTAAGGGTGATCAAAAGCTTACACCTCGTGCTGAAATCAGTAAACCTTCAGCAATGAACAACAATCGAGAGTTGAAGGTTAACCAGGATGGAAAATCTAGTGCATTATCAAGGTCAATGAGTAATATTAGCCGTAAAAGTTTGGAGCCTCAAGTTAGTTCAGAGAGGACATTGACCCGTGTTGATGAAGCTCAACAGGATGTGCTGCCTCGATCACGGGAGACAGCAAATGCAGTTGACAAAAGCAGAGATAGTTCCAGTGATCGGGGAAGGCCAGTTGTTGTTACTTCTTCAAAGAATCCATTCTGTCAAAAGTGTAAGGAATTCGGCCATGCTTTGGAATGCTGCACAGCTGGCAGTACACAGGAATCTGGTGCTGAAATATCTGTTACTGCCTCGAGTAGTTCAAAAGAGGAGATGGATAAAGACAATATATTGAAAGCAGCAATCCAGGCTGTACTTAGAAGGCCTGAAATTTACAAGAAGAAAGAAGTATCTAATCAAACTGACGAGGTTTCTACGTCTGGCACAGAGTTGAATTGCGAAGTGACTTCAAAAGACCAAGTGCTGGTTTCCAGCACACTGAAGAATAGTATATCTGCTGATGAAACCCTAGAACAACAGGAAGTCCTTGAGAATTCTACCTCAGATTCTTCCAAATGTTCATCTGCCAATGATGTGAAACCACTTAACTCTTGTCCAACGGACTTTCGGTCCAAACAAGGAAAGTCAGATTCCATTGGTCTTGCAGCTGGAAAGCCTGTAGTGAGAGACTTGTCTAATAAAGCTGTGACAGTGTCTACTGTTCCTTTGAAGATATTGGCCTTACCCGAATATGAATACACCTGGCAGGGCATCTTTGAAGTGCACAGAAATGGAAAACCTCCTGACTTATATACTGGACTTCAGGCACATTTGTCATCTTGTGCATCTCCTAAGGTTCTTGGGGTAGTGAACAAGTTTCTTCCCAAAGTTCCCCTCGATGAAGTTTCTCGTTTGAGCACTTGGCCTGCACAATTTCTTCATGGTGTTTGTGAAGATAATATTGCTCTTTATTTCTTTGCCAGGGATGTTGAAAGGCAAGGTCTATTAGATCACATGATTAGAAATGATCTAGCACTTAAAGGGAATTTTGATGGTGTTGAACTGCTGATATTCCCTTCCAATCAGCTTCCTGAAAATTCACAGCGATGGAATATGCTGTTTTTCTTATGGGGCGTATTTAGGGGGAAGAGGATCAGTCATTCAGATTCTGCAAAGAAGATCTGTATTCCCAGTTTGAATGTAATGCCAGTTGAGGAGAAATCTTCATCTGCTGTTTTGACTATGCCTGAAGCAAATTGTTCCCCAAAGTGCAAGGATGAAGAATCAATTGATTGTGATAAAGCATGCAATGCACTTCTCCCATCTACTTCCATAGACCTATGTCAGACTACTGGAAGTAGGAATTTTGATGTCAATGACCAGACACATTTGGGTTCACAAGGAAACTTACAGAAACTAGATAGTATGATTGACTCAAAATCTACATTAAGAGTTCCAACAAGCAGTACTCTGTTACGTCAAGAAATGAATTCCAACAGTTCATCCCTGGCTACTGGAAGTAGGAATTTTGATGTTAATGACAAGACACATTTGGGTTCACAAACATGGTCCCTCACACAACGTAAGTTTGAAGCAATAATGCTGTTAATGGTGCATGTGGCAGCAAAAAAACACTTACATATGTCAGTATGTGTCAGGATGAAATCCCTTGAGCATATTCACTTGTATGTGTCTAACTTGTTGCTTAAAGCCAGTGTACTTGAACAAGAACAATGCAAAGAATCTAAGCCTCCAGATGCAATGGGGAAAAGTGCAAGTAGTAGGATTGTGGAAACAAGAACTGACTCTGATATTTCTATTAAGCAAGAGAACACCTTGTCTTTGATTCCTTCTGAAAAAGGTGCCACAAGCAATATTAGTAAGGATAAGATTTCGGAGAAAATGAACAGTGATGAAAACCAGCAAAGGTCTAAGAAGAAACAAAAAGAGGATTCTCCCTATATTGATTTGGAGGCAAATATTGAGAATCAAGAAACAGGTGCTGCAAGCAATTTTAGCAAGGATAAAAATCCACTAACAATTATTGTTGATGAAGATTTGAGAAGGTCCAAGAGGAAACGGCAAGATGATCATTATATTGACTTGGAGGCAACAATTGAAGATCAAGAAACAGGTGCTATAAGCAATATATATGAGGATAACATTTCAGAAAAAATGGATGTGGAGAAGGATTTGCAATGGCTCAAGAGGAAACAGAAAGATGATCACTATATTGACTTGGAGGCAACATTTCAGGGAGATTCAAGTGCAGATGGGATCCACTCTCAGCTACCTAATGATAAAGTTAAGCATGTAGATCTTTCTGATACAATTATGCAAGGTTCTTCTGTTAGTTGTCAGAAAATACCTTGGAGTGAGGGAAACGACAGAGAAGACAGAGAAGCTTCTGGCAAGAAGCTAAAGACAGGTTTCAGTGGGATTTATGGTTCTGGAGGTAGAGACTCTTTTAATGACACTTTTAAATCTCTTGGAAATGATCTTGGTTCGAGTTCTTCAGTTGAGGACAAAGGATGTGAGGAAGCTTGTGATGAGAAAATCATCCGTGAGGACTTGGGAACCATGGAAAGAACCTTCTTTCCAGTTGGCACTCAGAATATTAGCCACTCACTATCAGTTCTGAATAGCATGTCAACCAAAGGGGTTCACGAGTACAATGAAGGGTTTCAAGATGGGATTCCCAATCTAGAACTTGCCTTAGGGGGGAAAATGAAACCACCACCTGCTGCGCCTAAGGGTATGCTGCCTTTCTTAGTTGGTGCAGTAGACAGGCAAAATAACCGTCCAGATGACTTGCGAGATGGGCAGGAGGATGATGGTGTTGCTGCATCTCTTTCCCTCTCTCTGTCCTTTCCATCTCCAAACAAGGAGCACACAAAAGCTGCGGAGCTTTTGCCTGATGGGCAGCGTGTGAACAACTCGTTTTTCCTGTTTGGGAGAAAATAAAGCTGCTGGCTGCTAATATGTTTCCAATCATGTAAATTATCTTATCTTGTTCCGGATGGCCCAGCCTGTACGATAGATAGATATAATCTTCTTCCCGCCCCCTCCATACAAAAAGAAGGAGCCGTTGTCCCAACAAGAGTCAATAAGTTCTCTCTTTTTCAAAAAAATCTTTTGTCACATACCCGTTTTTATGTTAGTTTTTTCTTTCTTTTTCTTTTTTTTCTCTTTCAGAATGCATAGTTACGGCTGTTTGTATATATAGAGAGAATTGAAGCCGGCATAATTTCAGATATGTTACTAGGAACTTGTGGATGACTATTTTTATGGCAGGGTTTCCTTTGTTCCTGGC 5314 0.402 MIQNTDMRVESGTCNVCSAPCSSCMHLNHALMGSKAEEFSDENCRVGETNDQYSMDVDNAYSLRSRVCESSQHTVSEASNMQSVNSSHDALSENAESNQITVNKYQDSNQLEADDDNTSCINRASDVNLVNGGHQRNEERMIMHVERDSCSHVPEKLSECSIENSSSPLTKKREPVVSGEKCIVVKDGLIESTSKIPLKVCPKSEADTDVCDANTEDPKCSVQVGQLEKAEELVKSPGKQEPQSEDESDESDVVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKDAEENENKRLDVEDKKMVEVSSTSQVSVKRISDNIEVAPAAKRQSLESSTGSPKTSSPKRLVPLSRESSFKSLDKSKVKPALLIPIRNHSGGNDTEIARSASIGPRAQNQKSLLKSSSFNNINSKPRVKLVDEVVPQKSKGGSEHTSKNVEMPSRITGKSTLFKSSSLGRSNAAESKVKMLSPKSVTTQDSKGSRHLKESGAFDRKFPSRIDRPVASSVVSTPKGDQKLTPRAEISKPSAMNNNRELKVNQDGKSSALSRSMSNISRKSLEPQVSSERTLTRVDEAQQDVLPRSRETANAVDKSRDSSSDRGRPVVVTSSKNPFCQKCKEFGHALECCTAGSTQESGAEISVTASSSSKEEMDKDNILKAAIQAVLRRPEIYKKKEVSNQTDEVSTSGTELNCEVTSKDQVLVSSTLKNSISADETLEQQEVLENSTSDSSKCSSANDVKPLNSCPTDFRSKQGKSDSIGLAAGKPVVRDLSNKAVTVSTVPLKILALPEYEYTWQGIFEVHRNGKPPDLYTGLQAHLSSCASPKVLGVVNKFLPKVPLDEVSRLSTWPAQFLHGVCEDNIALYFFARDVERQGLLDHMIRNDLALKGNFDGVELLIFPSNQLPENSQRWNMLFFLWGVFRGKRISHSDSAKKICIPSLNVMPVEEKSSSAVLTMPEANCSPKCKDEESIDCDKACNALLPSTSIDLCQTTGSRNFDVNDQTHLGSQGNLQKLDSMIDSKSTLRVPTSSTLLRQEMNSNSSSLATGSRNFDVNDKTHLGSQTWSLTQRKFEAIMLLMVHVAAKKHLHMSVCVRMKSLEHIHLYVSNLLLKASVLEQEQCKESKPPDAMGKSASSRIVETRTDSDISIKQENTLSLIPSEKGATSNISKDKISEKMNSDENQQRSKKKQKEDSPYIDLEANIENQETGAASNFSKDKNPLTIIVDEDLRRSKRKRQDDHYIDLEATIEDQETGAISNIYEDNISEKMDVEKDLQWLKRKQKDDHYIDLEATFQGDSSADGIHSQLPNDKVKHVDLSDTIMQGSSVSCQKIPWSEGNDREDREASGKKLKTGFSGIYGSGGRDSFNDTFKSLGNDLGSSSSVEDKGCEEACDEKIIREDLGTMERTFFPVGTQNISHSLSVLNSMSTKGVHEYNEGFQDGIPNLELALGGKMKPPPAAPKGMLPFLVGAVDRQNNRPDDLRDGQEDDGVAASLSLSLSFPSPNKEHTKAAELLPDGQRVNNSFFLFGRK 1544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01340 1544 MobiDBLite consensus disorder prediction 1137 1211 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 498 518 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 543 588 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 231 253 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 348 377 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 1151 1187 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 350 370 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 447 480 - -
Pste1g01340 1544 ProSiteProfiles Zinc finger PHD-type profile. 258 309 IPR019787 -
Pste1g01340 1544 PANTHER - 258 978 - -
Pste1g01340 1544 SUPERFAMILY FYVE/PHD zinc finger 247 309 IPR011011 -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 1188 1211 - -
Pste1g01340 1544 SMART PHD_3 260 307 IPR001965 -
Pste1g01340 1544 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 333 IPR013083 -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 589 617 - -
Pste1g01340 1544 MobiDBLite consensus disorder prediction 440 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01340 Pste-Chr1 4250634 4260059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01340 257 325 C2H2 Transcription Factor Family AT3G01460 34.783 8.42e-06 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01340 1 4250634 4260059 Pste1g01340 1 4250634 4260059 ECH