Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01337 ATGTCACCCGATGACACACCACCTTCAAAGCCCGCCACAACAAAAGAGCAAGAGAACCAAAGTTCCGGTGGCCGGAAAAGCTCCTCCACAAGGCCCCAAGAACAAGGTCTGAAGTGCCCTCGATGTGACTCACCCAACACCAAGTTCTGCTACTACAACAACTACAGCCTCACGCAGCCAAGGCATTTCTGCAAGACATGTAGAAGATACTGGACAAAAGGTGGGGCGTTGCGAAACGTCCCTATTGGCGGTGGGTGCAGGAAGAACAAGAAGGTGAAGTCATCAAGGCTCTCATGTGACTCCAAAGACTCTGGTTCCTCCTCTTCAGACCTTGGTGGCCTCAAGTTCCTTCACACTCTTTCTCCTTCCATGGACTTTCACCTTGGAGGGTTACCCTTCCCTAGGCTGCATCATCACCCTCCAACCACTTACAACCACTTTTCCTCTTTGGGAGACACTTCTAGTGCTTCTTCTTGTTACAACCTTGACCCTTCTCCTGGCACCACCTCAAGTTCTTTTGCTGCCCTTAATTACCCCTTTTCTTATAATGGTGCAATCCAAGGTATGAGCTCTATGAACGTTCATAGTGGTCTCGCTTCTTCCATTGAGTCTTTGAGTTCTATAAACCAGGACTTGCACTGGAAGCTGCAGCAGCAGCGATTGGCAATGCTGTTTGGCGGAGATAACAGCCAGAAAGATAGTGGTAGTGGAGTTTCATCAACGGTTAACCAGATTGAGAACCAGGCACAGAAACCACAACCCATTTTGTTTCAGAATCTTGAGATTTCAAAGCCAGGGATTCTCCCAGTTGGGAACTTCAGAAAAGAACAAGGTCCAAGTGGGGACCCACAAACGCCTTCTACGGAGTGGTTCTTTGGAAATTCTTATGCCTCAGTGACTCCTACACCTACTACTACCAGTAGTGGTGGCCCAGGGAATGATAATGCAAGCAATTGGAGTAGCGGTGTCCATGCTTGGGGTGATGTGCCGCAGCAATATAGTGCTTTGCCCTAG 1014 0.4882 MSPDDTPPSKPATTKEQENQSSGGRKSSSTRPQEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSRLSCDSKDSGSSSSDLGGLKFLHTLSPSMDFHLGGLPFPRLHHHPPTTYNHFSSLGDTSSASSCYNLDPSPGTTSSSFAALNYPFSYNGAIQGMSSMNVHSGLASSIESLSSINQDLHWKLQQQRLAMLFGGDNSQKDSGSGVSSTVNQIENQAQKPQPILFQNLEISKPGILPVGNFRKEQGPSGDPQTPSTEWFFGNSYASVTPTPTTTSSGGPGNDNASNWSSGVHAWGDVPQQYSALP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01337 337 Pfam Dof domain, zinc finger 35 91 IPR003851 GO:0003677|GO:0006355
Pste1g01337 337 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Pste1g01337 337 MobiDBLite consensus disorder prediction 270 337 - -
Pste1g01337 337 MobiDBLite consensus disorder prediction 7 35 - -
Pste1g01337 337 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Pste1g01337 337 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 19 222 IPR045174 GO:0003700|GO:0006355
Pste1g01337 337 MobiDBLite consensus disorder prediction 1 39 - -
Pste1g01337 337 MobiDBLite consensus disorder prediction 278 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01337 Pste-Chr1 4234202 4235215 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01337 27 337 C2C2-Dof Transcription Factor Family AT5G65590 40.881 1.56e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste1g01337 zf-Dof 1.3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01337 1 4234202 4235215 Pste7g00238 7 2222113 2223225 PCT