Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01336 CACCTAAAGAGAAGAGGGAAATAAATAAGAAAAAGGAGAAGATGATATAGAATTGGGGTTGAGAAGAGTGGGGGAGGAAAGATGAGTAAGTGGCCATTCACAATGTCTCAGTGGCAGGAACTGGAGCACCAAGCTTTGATTTACAAATACATGGTAGCTGGTCTTCCTGTGCCTCCTGATCTAGTCATTCCCATTCAGAACAGCTTCCATTCCATTTCCCAGAACTTCTTGCACCATCCCTTTAGCACCATGAGTTATTGTTCCTTCTATGGGAAGAAGGTGGACCCAGAGCCAGGACGATGCAGGAGGACTGATGGGAAAAAGTGGAGGTGCTCTAAGGAAGCATACCCAGATTCCAAGTACTGTGAGCGACACATGCACCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCACAAACTATGACACAGTCATCATCATCCACTGTGACATCATTGACAGTAACTACTAGTGGCAGCAGTAGTGCAACTGGAAATTTCCAGAACCTTACCACCTCAAATGCATATGGTAATCCCCAAGGGACTGGTTCTGGAACAGAGCAAAGCCACTATCATCTGGATTCCATTCCATATGGGATCCCAAGTAAAGAATACAGGTATTTTGAAGGACCTAAATATGAGGGTGGTGAATTGTCCAAAACTTTAGGAAGCAACAAGGTTGTCCACTTGGAATCACAAATGATGCCAACAGGAGTTGCCTCAAATAACAATTTCATGTTCCAGCAGCAAGAGAGTCACTCCCTTCGACCCTTCTTTGATGAATGGCCTAAAAGCAGGGAGAACTCATGGTCTGGTCTGGAGGATGAGAGATCTAACCACTCAACTCTCAATGGAAGCTAAATATGTGCCATCAAATAAATTTTATGTTACATAGGCCATTGAACATTAGGCTTTCTCAAAGAAACAACAGTTGAACTTGAGGGAAAATGCTACATTGACAATTTGACATTCCCATTGATTAAGTTTTTGGGCCGAAAAGAGTTCATGACTTTTGGTGCCCATGTGCATTCCAATTCCCAATTTTAGCTATCTCTTCTACTACTCACGAAAACCTAAAAGATATTAAAGTTATATCTTCTACTCCATTATTGCT 1114 0.4264 MSKWPFTMSQWQELEHQALIYKYMVAGLPVPPDLVIPIQNSFHSISQNFLHHPFSTMSYCSFYGKKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMTQSSSSTVTSLTVTTSGSSSATGNFQNLTTSNAYGNPQGTGSGTEQSHYHLDSIPYGIPSKEYRYFEGPKYEGGELSKTLGSNKVVHLESQMMPTGVASNNNFMFQQQESHSLRPFFDEWPKSRENSWSGLEDERSNHSTLNGS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01336 259 ProSiteProfiles WRC domain profile. 68 112 IPR014977 -
Pste1g01336 259 Pfam QLQ 5 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste1g01336 259 MobiDBLite consensus disorder prediction 95 168 - -
Pste1g01336 259 PANTHER GROWTH-REGULATING FACTOR 5 5 242 IPR031137 GO:0005634|GO:0006351|GO:0032502
Pste1g01336 259 ProSiteProfiles QLQ domain profile. 5 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste1g01336 259 SMART QLQ_2 4 40 IPR014978 GO:0005524|GO:0005634|GO:0006355
Pste1g01336 259 MobiDBLite consensus disorder prediction 109 164 - -
Pste1g01336 259 MobiDBLite consensus disorder prediction 239 259 - -
Pste1g01336 259 Pfam WRC 69 111 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01336 Pste-Chr1 4231313 4236689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01336 1 111 GRF Transcription Factor Family AT3G13960 61.062 8.20e-46 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Pste1g01336 WRC 1.2e-21 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01336 1 4231313 4236689 Pste1g01336 1 4231313 4236689 ECH