Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01320 TTTGCTTCCTCACTCCTTTTTGGAAATCGTTCCTACTTATATTCAAATATTTTACCACAGATTCAAATGGCAAACCATGCAGAAATTGAGCATCCCAGGAAGGGATTTGGTTGGGCAGCCAGGGATTCTTCTGGTCATCTCTCCCCTTTCAATTTCTCCAGAAGGGAAACAGGTGAAAAAGACGTGGCATTAAAAGTGTTGTACTGCGGAATATGTCACTCGGACCTTCACTTTGCGAAGAACGAATGGGGGGCTTCAATCTATCCACTAGTTCCAGGGCATGAGATAGTTGGTGTGGTAACAGAGGTGGGAAGCAAAGTTGAGAAGTTCAGAGTAGGGGACAAGGTGGGTGTGGGATGCATAATTGATTGCTGCCGCACCTGCCAATTTTGTGTTGACAATCTTGAGAATTATTGTCCACAATATAAGTTTGCGTATTCTACAAAATACAAAGATGGCACTACCACATATGGAGGCTTCTCTGACTCAATGATTGTAGAGGAACACTTTGTGATTCGCATTCCTGATGGCTTACCACTTGACGCTGCTGCACCTCTCCTTTGTGCTGGCATCACTGTGTATAGCCCTCTCAGATATTTTGCTCTAGACAAGCCTGTTTTACATATTGGAGTGGTTGGTCTCGGTGGACTAGGCCATATGGCTGTCAAGTTTGCCAAAGCTTTTGGGGCTAAGGTCACAGTAATAAGTTCATCACCCAATAAAAAGGACGAAGCAATACAACATCTTGGAGCTGACTCTTTTCTGATAAGCCGTGACGAAGATCAGATGAAGGCTGCAAATGGCACTTTGGATGGTATTATTGACACGGTTTCTGCTGCTCATCCTCTCTTACCTCTCATTAATCTACTCAAGTCTCATGGAAAGCTTGTAATGGTCGGTGTACCGGAAAAGCCTTTGGAGCTTTCTGTCCTTCCATTAATTTTAGGGAGAAAGATAGTCGCTGGCAGTAACATTGGAGGGATGAAGGAGACCCAAGAGATGATTGAGTTTGCTTCCGAACACAATGTAACACCTGACATTGAAGTCATTCCCATTGATTATGTCAACACAGCAATGGAGCGTCTCCTCAAAGCAGATGTAAAATATAGATTTGTGATTGACATTGGAAACACACTAAAACCATGCTCTTGA 1152 0.434 FASSLLFGNRSYLYSNILPQIQMANHAEIEHPRKGFGWAARDSSGHLSPFNFSRRETGEKDVALKVLYCGICHSDLHFAKNEWGASIYPLVPGHEIVGVVTEVGSKVEKFRVGDKVGVGCIIDCCRTCQFCVDNLENYCPQYKFAYSTKYKDGTTTYGGFSDSMIVEEHFVIRIPDGLPLDAAAPLLCAGITVYSPLRYFALDKPVLHIGVVGLGGLGHMAVKFAKAFGAKVTVISSSPNKKDEAIQHLGADSFLISRDEDQMKAANGTLDGIIDTVSAAHPLLPLINLLKSHGKLVMVGVPEKPLELSVLPLILGRKIVAGSNIGGMKETQEMIEFASEHNVTPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKPCS 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01320 383 Gene3D - 189 345 - -
Pste1g01320 383 FunFam Uncharacterized protein 38 188 - -
Pste1g01320 383 PANTHER ALDEHYDE REDUCTASE 28 378 IPR047109 GO:0016616
Pste1g01320 383 Pfam Alcohol dehydrogenase GroES-like domain 60 173 IPR013154 -
Pste1g01320 383 Pfam Zinc-binding dehydrogenase 216 338 IPR013149 -
Pste1g01320 383 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 93 107 IPR002328 GO:0008270|GO:0016491
Pste1g01320 383 Gene3D - 38 375 - -
Pste1g01320 383 FunFam Putative cinnamyl alcohol dehydrogenase 6 346 375 - -
Pste1g01320 383 FunFam Cinnamyl alcohol dehydrogenase 189 345 - -
Pste1g01320 383 CDD CAD1 36 374 IPR047109 GO:0016616
Pste1g01320 383 SUPERFAMILY GroES-like 42 202 IPR011032 -
Pste1g01320 383 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 178 343 IPR036291 -
Pste1g01320 383 SMART PKS_ER_names_mod 45 373 IPR020843 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01320 Pste-Chr1 4179348 4181218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01320 33 381 Monolignol Biosynthesis Gene Families AT4G37990 70.774 6.16e-170 477
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01320 1 4179348 4181218 Pste7g00232 7 2172607 2174692 PCT