Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01297 GTTGCACACGATGATCAAGTTATCTGAGAGAGGAAAGAAACAAAAACAACACTGCTAGCTACTACACCTACAACAACATCAACTACTAGCTACTACTTCTTCATATACGTGTGTTTGTATTTATTTTCAAGAGAGAGAAACTAACAGAGATAGATACTCGTACTCCCGAATCTGAGTGGTTAGTTTAGTTACAATATACCACAGGAGGAATGTCTGAGGTTATTAAAGACTCAGCCATAAAGCTGTTTGGTAGAACAATTTCTCTTCCACGCAACAACCAGGTTTCTGCAAATGGTTCTTCTTCTGATCAACTGCCTGCTCCTCCTCTAGATTGTTCTCGTCATAGTCCTCCTTCATCTTCATCTTTTCCACGTGAACTGAGCTCCACAACGGAACATGAACCTCATAATGATAAGAAACAAACAAGGAAAGAACTCACCTCAACACAAGATGACGAGGCCTCATTTCAAAGCACAGAGGAACTAAAATCTCCAACATCATCTTCAGGCAATCTGGAGAACCCCAAGACCCCCTCAACTGAAAGAGAAACTTGTTTACTGAAATCATCTAAAAATGGAGAGCAAAGTGACACAACAAGTGCATCACCAGAGAAGACACTAAAGAAACCAGACAAAGTACTACCATGCCCTCGATGCAACAGCATGGACACCAAGTTTTGCTACTACAACAACTACAACGTGAACCAGCCACGCCATTTCTGCAAGCACTGCCAGAGATATTGGACTGCAGGAGGCACCATGAGGAATGTGCCAGTTGGTGCTGGTCGCCGCAAGAACAAGAACTCTTCTTCTGTGTCACATTATCGCCAAATCATGGTTCCTGAGGCTCTTCAAACACCCAATGGATCACTTCACAGTGCTGTGTTGACCTTTGGATCGGATTCCCCTCTCTGTGACTCCATGGCTTCTGTGCTTAGCCTTGCTGAGAAAACACAAAATGGTGTCTTAAACGGGTTTCATTCACCTAAGCAGAATCTTAACACTATTAGTAATAATAATGGGGATGATAACTCTAACTCTATTGGTTCTTCTGTTATGGCTTCAACTTTGTGTGAGAGGAGAGACAATGCTACTAGCTCCCATGAAGAATCATTTGATAAGACTTATCCTCAAGGTTTCACTCCTCAGTTATGCTTCACAGGTTCTTCATCTTCTTCTCCTTCTCCTTCTCCGTGGCCTTATCCATGGAACCCTGCAATGACTCCTTCAGCTTTTTGTCATCCTGTGCCATTCTACCCCACACCAGCATTCTGGGGTTGCATGTCACCACCCTCATGGAGTGTAAATTACCAATCTGCCCCTACTTCTGGTCCAAACTCACCTACTCTAGGGAAACACTCAAGAGATGGGGATATCTTGTTTCAAAAACCTGGCACAGAAAGCAGCAACATGGCGGAAAATAACAACACTGTGTTGATCCCCAAGACACTGAGAATTGATGACCCTACTGAAGCTGCAAAGAGCTCTATATGGTCAACACTTGGGATCAAGAATGAGAAGGGAAACTCCCTCAATGGAGGAGGACTTTTCAAGGCATTTGCATCAAAGGGTAGTGATGACAAGAACCATGTGGTGGTTGAAGCATCCCCGGTGTTGCAAGCCAACCCTGCAGCTCTGTCCAGATCTCTTGTCTTCCATGAGAGGACATAATTGGGAATTGTTGCAATGATCTCACCTAGCTTCATGCAAAATGTTTCTGAAGTAGGCCACACCAGTTTAACTAGCTAGACCCTTGTTCTGGGGTGGTGAGTGGTGGCTTGTTTTTGCTTTTCTCCATGAGAAATTGTATTATGAACCAACCTTTCTGCAGAATTTGTAGGACATGAGAGTTATATATATATAGTCTAGTTTCCATCTTGAGCCTGTCAGAGTGAACAGGTGTTTTTTTCAGATTTAGAAGAGTTGTTGAGTAAATATCTTTGTTGTAC 1948 0.4307 MSEVIKDSAIKLFGRTISLPRNNQVSANGSSSDQLPAPPLDCSRHSPPSSSSFPRELSSTTEHEPHNDKKQTRKELTSTQDDEASFQSTEELKSPTSSSGNLENPKTPSTERETCLLKSSKNGEQSDTTSASPEKTLKKPDKVLPCPRCNSMDTKFCYYNNYNVNQPRHFCKHCQRYWTAGGTMRNVPVGAGRRKNKNSSSVSHYRQIMVPEALQTPNGSLHSAVLTFGSDSPLCDSMASVLSLAEKTQNGVLNGFHSPKQNLNTISNNNGDDNSNSIGSSVMASTLCERRDNATSSHEESFDKTYPQGFTPQLCFTGSSSSSPSPSPWPYPWNPAMTPSAFCHPVPFYPTPAFWGCMSPPSWSVNYQSAPTSGPNSPTLGKHSRDGDILFQKPGTESSNMAENNNTVLIPKTLRIDDPTEAAKSSIWSTLGIKNEKGNSLNGGGLFKAFASKGSDDKNHVVVEASPVLQANPAALSRSLVFHERT 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01297 486 MobiDBLite consensus disorder prediction 17 37 - -
Pste1g01297 486 ProSitePatterns Zinc finger Dof-type signature. 146 182 IPR003851 GO:0003677|GO:0006355
Pste1g01297 486 PANTHER CYCLIC DOF FACTOR 2 1 486 IPR045174 GO:0003700|GO:0006355
Pste1g01297 486 MobiDBLite consensus disorder prediction 59 80 - -
Pste1g01297 486 Pfam Dof domain, zinc finger 141 198 IPR003851 GO:0003677|GO:0006355
Pste1g01297 486 MobiDBLite consensus disorder prediction 81 133 - -
Pste1g01297 486 MobiDBLite consensus disorder prediction 17 141 - -
Pste1g01297 486 MobiDBLite consensus disorder prediction 259 280 - -
Pste1g01297 486 ProSiteProfiles Zinc finger Dof-type profile. 144 198 IPR003851 GO:0003677|GO:0006355
Pste1g01297 486 MobiDBLite consensus disorder prediction 44 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01297 Pste-Chr1 4129148 4132576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01297 105 485 C2C2-Dof Transcription Factor Family AT3G47500 47.118 5.46e-92 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste1g01297 zf-Dof 4.6e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01297 1 4129148 4132576 Pste6g02582 6 13201807 13210332 PCT