Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01294 ATGATTTCACGTGAGAGTTCTGGCACCTGGCACCGTGACTGTGTCCGTGAGTGTGGTGGAGGAGTTTCGAGAAAGCAAGGCAAGGGCAGCAGAGTAAGTGCGTGCATTCGGGTTACTTTACTTGTCTTCTCTTCAAGATGGTTCTCATTATGGGAAACCAAAACAGTTGAAAGAGGAGGTGAGGTGGTGATCACAACTTGCAAGTGTTGTGTGTGGTTTGTGATGGAGAGATACTATGTGTTTGTTTGGGTGCTTTGTCTCTTGCTGTCCCAACCGGGCAGATCAGAAGACGATTCCGAACCACTTCTGGCATTGAAATCCTCCATAGACGTTCTGAACAAGCTTCCATGGAGAGAAGGAACCGACGTGTGCACGTGGTTTGGGGTCAGAGACTGCTTCCAGGGAAGAGTGAGAAAGCTAGTCCTGGAATACTCAAACTTAACCGGCACTTTGGACTCCAACATCCTCAACCGTTTGGACCAGCTCCGAGTCCTCAGTTTCAAAGGAAACTCACTCTCCGGCCAACTCCCCGACCTCTCCGCCTTGATCAACCTCAAATCGATATTCTTCAACAACAACAACTTCTCCGGCCACTTCCCCGCCTCCCTCGCCTTCCTCCACCGCGTCAAGGTCATTGTTCTGTCGCATAACCACATCTCCGGTCACATTCCGGCGTCGCTGCTCAATCTCCGGCGACTGTATGTTCTCTACTTGCAAGACAACGCCTTGACCGGACGCATTCCGGGTTTCAACCAAAGCAGCCTAAGGTATTTAAACGTGTCCGACAACCGACTCTCCGGGCAGATACCGGTGAGCTCCGCATTGATCCGGTTCAATGCGTCGTCGTTTTGGGGGAACCCGGGGCTATGCGGGGAACAGATCCAGCTGGAATGCGGTTGGTTGGCGGCGGCGCCGATAAGTCCCGGTTATGCGGGGAGGTCCAGGTCAATGTCATGGAAGCGCACGAAATTGATAAAAATAATTGGAGGGAGTGTTGGTGGGGTTGTGTTGGTCGTGGTGTGCATGGTATTGGTGTGGGGAATTGGGAAGAAGCGGAGGACGAGAGTGGGTTCTGGAACGAGGAGCAAGGGCGGTGGTGAGGCGGAGGGTCTAGGGAAGCTCGTGTTCTGCGGCGGAGGGGATCGGGAGATGAGCTATACTTTGGAGGACTTGCTGAAGGCTTCGGCGGAGACATTGGGGAGGGGTATTTTGGGAAGTACCTATAAGGCAGTTATGGAATCAGGCTTCATTGTTACTGTCAAGAGGTTAAAAGACGCAAGATACCCTTCCTTAGATGACTTCAGGACCCACATTCAACTCCTTGCCCGCCTCACACACCCTAACTTGGTCCCACTTAGGGCCTATTTCCAGGCTAAGGAAGAACGCCTTCTCGTTTATGATTACTTCCCCAATGGCAGCCTCTTCTCCCTTATTCACGGATCAAAAACATCTGGTGGCGGAAAGCCTCTTCACTGGACATCCTGCCTTAAAATTGCTGAAGATCTTGCAACTGGCCTGCTCTACATCCACCAGAACCCCGGGTTGACACACGGAAACCTGAAATCTTCTAATGTGTTGCTGGGTTCTGATTTTGAGTCATGTCTCACTGATTATGGTCTTACGGTGTTCCTTAATCCTGAATCAATGGATGAGCCTAGTGCCACTTGTTTATTCTATAGAGCACCAGAATGCCGCAACTTTCAAAGGTCACAAACTCAACCGGCTGATGTATACAGTTTTGGGGTCCTTCTTCTAGAGCTTCTAACGGGGAAAACACCCTTCCAAGACCTTGTTCAGACATATGGTTCAGACATACCTAGATGGGTTCGGTCAGTGAGGGAAGAAGAGACGGAATCCGGAGATGATCCTGCCTCAGGCAATGAAGCATCTGAAGAGAAGCTTCAGGCTCTTTTGAACATTGCAATGGCATGTGTTTCACTAGTGCCGGAGAACAGACCTACAATGAGAGAAGTTTTAAAGATGATAAGAGATGCAAGAGGGGAGGCTCATGTCTCATCTAACAGTAGTGATCACTCCCCTGGTAGATGGTCAGATACTGTTCAAAGCTTTCCACGAGAAGAACACCAGAGCATATGATTGATTGGTAACTTTTTGACAGCTTAATTAATAGTTGAAACTACTCATTCTCATTTTTCCTTAATTGCTTATTCATTCCATTCCATGCATAACTACCATTTTTAATCCCTTTGCTTTGTCACTAAATGCATTTTAAAGGTAATTAACGGATTCATTTATAGAGTTATCAAACATTCAGCTTG 2279 0.4853 MISRESSGTWHRDCVRECGGGVSRKQGKGSRVSACIRVTLLVFSSRWFSLWETKTVERGGEVVITTCKCCVWFVMERYYVFVWVLCLLLSQPGRSEDDSEPLLALKSSIDVLNKLPWREGTDVCTWFGVRDCFQGRVRKLVLEYSNLTGTLDSNILNRLDQLRVLSFKGNSLSGQLPDLSALINLKSIFFNNNNFSGHFPASLAFLHRVKVIVLSHNHISGHIPASLLNLRRLYVLYLQDNALTGRIPGFNQSSLRYLNVSDNRLSGQIPVSSALIRFNASSFWGNPGLCGEQIQLECGWLAAAPISPGYAGRSRSMSWKRTKLIKIIGGSVGGVVLVVVCMVLVWGIGKKRRTRVGSGTRSKGGGEAEGLGKLVFCGGGDREMSYTLEDLLKASAETLGRGILGSTYKAVMESGFIVTVKRLKDARYPSLDDFRTHIQLLARLTHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSKTSGGGKPLHWTSCLKIAEDLATGLLYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLTVFLNPESMDEPSATCLFYRAPECRNFQRSQTQPADVYSFGVLLLELLTGKTPFQDLVQTYGSDIPRWVRSVREEETESGDDPASGNEASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARGEAHVSSNSSDHSPGRWSDTVQSFPREEHQSI 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01294 698 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 82 667 IPR046959 -
Pste1g01294 698 Pfam Protein kinase domain 396 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01294 698 Gene3D Transferase(Phosphotransferase) domain 1 469 685 - -
Pste1g01294 698 Pfam Leucine rich repeat N-terminal domain 96 130 IPR013210 -
Pste1g01294 698 SUPERFAMILY L domain-like 103 291 - -
Pste1g01294 698 Gene3D Ribonuclease Inhibitor 97 203 IPR032675 -
Pste1g01294 698 FunFam Nuclear pore complex protein NUP107 95 249 - -
Pste1g01294 698 SUPERFAMILY Protein kinase-like (PK-like) 397 673 IPR011009 -
Pste1g01294 698 Gene3D Ribonuclease Inhibitor 204 292 IPR032675 -
Pste1g01294 698 ProSiteProfiles Protein kinase domain profile. 393 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01294 698 Gene3D Phosphorylase Kinase; domain 1 380 468 - -
Pste1g01294 698 MobiDBLite consensus disorder prediction 672 698 - -
Pste1g01294 698 MobiDBLite consensus disorder prediction 669 698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01294 Pste-Chr1 4115763 4120337 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01294 80 698 Receptor kinase-like Gene Family AT1G60630 60.578 0.0 743
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pste1g01294 Pkinase 7e-36 CL0016