Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01284 GAAGAAAGAATAGAGGGAATTTTTTTTTTAAAAAAAAAATAAAAAGTTGGTATGAAATGGGATGAGAGAGGAAGAACCACAGCTCATGGCATATATTCCCCCAACATAGCCCCACTTATGTTTCCTGATATGGAGTGAGATCATAGAACAACACAACCAACTCCAAGTTATAAAGAGAACTATAGCTGGCACATATTGATGCGTAGGTAAAAGGATCAAAAGACATATCTATGTTTCAGTCCTTTACTAGTAAGTAAGTAGTAACTCATCCAAAAATAGCAAATGGATCTACAAAACGTGCAAAATCAAAGCATGCATTTTGTGCTGTCCACTGACTCCAAACCAAGGCTAAAATGGACTCCTGAGCTTCACCAACGATTCATTGAGGCAACCAATCAACTTGGAGGTGCAGATAAAGCAACACCAAAGAGTCTTATGAGGGTGATGGGAATTCCAGGACTAACTTTGTACCACCTTAAGAGCCATTTACAGGCATTCATTTCCCTTTTACTTGGGAAAAGCCAACAATTAGACACCTGCTCTGACAGCAAACAAGAAGATTACATAGAAACTAAGAGCAGTGATGGCCATTGCAGCAGGGAAATCAGTCTTGGCGCCCAGAATAAAATTACTGAAAACATGCAGATTGCGCAGGCTCTCCAAATGCAAATGGAAGTGCAGAAACATTTGCAACTCAGAATTGAAGCTCAAGGGAAGTATTTACAATCAGTGCTAAAGAAGGCACAGGAAGCACTTGCTGGATACAATTCTTCCCCAGTGGGGATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACAATGCTTGTCCAAGTTCTCCCATCTCAGAACTGACAGAAACAAAAGGGTTGCGTTTAAGCTGTGGAGAGAGGAAAAGAGACAGAGGAACCATGTGTTCGCTGGAGAGTTCTTTGACATCTTCTGAAAGCTCAGGGAGAAAGGAAGAGAAACAGCCGATGGAAGAGCTAGATGAGTTCAAAAGTCCCAATAATGTTTCACTTGAATTGCCATTGATGGACATGCACACTGAGGGAAAAGCATCTAATGGAGGCTCAAGCAATGAGGCTAGTGGGAAAAAGAGAAGTGCAAAAACAAAATCTGATGATGGTAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATTTGGCAACAAGTTGAGGAAAGCCATGTTGTCAGAAGTGCTTGACTTGAACAACCATTGTCAAAGTGACATGGACTCATCAACAAGTTCAAAACCATTAGACTTAAATTGTAGTTTAAACTTTTGGGAACCATGAAGATGGTTTTATACTTCCTAATTAATTATATGAACTATGAAGCAGA 1354 0.4018 MDLQNVQNQSMHFVLSTDSKPRLKWTPELHQRFIEATNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQAFISLLLGKSQQLDTCSDSKQEDYIETKSSDGHCSREISLGAQNKITENMQIAQALQMQMEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNACPSSPISELTETKGLRLSCGERKRDRGTMCSLESSLTSSESSGRKEEKQPMEELDEFKSPNNVSLELPLMDMHTEGKASNGGSSNEASGKKRSAKTKSDDGSCVVEQPCGKRFGNKLRKAMLSEVLDLNNHCQSDMDSSTSSKPLDLNCSLNFWEP 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01284 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 6 268 IPR044848 GO:0003700
Pste1g01284 341 MobiDBLite consensus disorder prediction 213 288 - -
Pste1g01284 341 Gene3D - 19 74 - -
Pste1g01284 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Pste1g01284 341 MobiDBLite consensus disorder prediction 225 240 - -
Pste1g01284 341 NCBIfam myb-like DNA-binding domain, SHAQKYF class 20 72 IPR006447 GO:0003677
Pste1g01284 341 Pfam MYB-CC type transfactor, LHEQLE motif 120 156 IPR025756 -
Pste1g01284 341 SUPERFAMILY Homeodomain-like 19 74 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01284 Pste-Chr1 4075321 4077373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01284 11 299 G2-like Transcription Factor Family AT1G69580 45.338 5.50e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste1g01284 Myb_CC_LHEQLE 1.4e-11 No_clan