Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01276 TTATAATTGACCTCATTGGACTTTTAAGGTAATAATTTGTATACAAAGCCATTTCTGTTTCCTTATTTCGGTCTTCTCTTATAAAAAGTTTTGGTCTGTGATTTTAGTAGGCTCGGTGAGAGTGGATATGGATGAACGGTACGAGACTTTGAAGGAGCTTGGTTCGGGGAACTTTGGAGTGGCAAGGTTGGCTAAAGACAAGAACACAGGGGAACTTGTTGCTATCAAATACATAGAAAGGGGAAAAAAGATTGATGCAAATGTTCAAAGGGAGATAGTTAACCACCGATCTTTAAGGCATCCAAATATTATCAGGTTCAAAGAGGTAAGAGTTTGTTTCCTCAGATATTTTCTGCAGGTATTTCTGACCCCTACTCATTTAGCTATTGTGCTGGAGTATGCTGCTGGTGGTGAACTCTTCGAGAGGATATGCAATGCTGGTCGATTGAGTGAAGATGAGGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTAGCTATTGTCATTCCATGCAAATATGTCATAGAGATCTGAAATTGGAAAACACTCTACTGGACGGAAATCCGGCTCCTAGACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCTGCTTTGCTGCACTCTCAACCCAAATCCACAGTTGGAACTCCTGCATACATTGCTCCAGAAGTTTTGTCACGAAAGGAATACGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACACTTTATGTCATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAAGAATTTCAGAAAGAGTATTGGGGTGAACTCTTACTTGACTTAA 826 0.3995 MDERYETLKELGSGNFGVARLAKDKNTGELVAIKYIERGKKIDANVQREIVNHRSLRHPNIIRFKEVRVCFLRYFLQVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGVNSYLT 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01276 232 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Pste1g01276 232 SMART serkin_6 5 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01276 232 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Pste1g01276 232 PANTHER SERINE/THREONINE KINASE 3 220 - -
Pste1g01276 232 PIRSF ILK 2 228 - -
Pste1g01276 232 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Pste1g01276 232 FunFam Serine/threonine-protein kinase SRK2A 92 230 - -
Pste1g01276 232 ProSiteProfiles Protein kinase domain profile. 5 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01276 232 SUPERFAMILY Protein kinase-like (PK-like) 3 219 IPR011009 -
Pste1g01276 232 Pfam Protein kinase domain 5 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01276 232 Gene3D Transferase(Phosphotransferase) domain 1 92 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01276 Pste-Chr1 4062558 4064962 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01276 4 214 CBL-interacting serine-threonine protein kinases AT2G26980 44.643 1.49e-57 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pste1g01276 Pkinase 2.4e-60 CL0016