Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g01218 | GAGAAATGAGAGCATATTGATTATTGAATTAATGGGAGGTGCGAATAGTAATATGGGTGGTAAAAAGAAAACCGTAAGTTATGACAAAATGGAATGCAACAGACAAAAAATAAAATAAAATATATATTTGGGGACAGGGTAGAGAGTTCCATATTGTTATGGTTAAAAAATTAAGACATGAGTGAATGAAAAGGGATTGTGTGTTAGAGCTTTCCTGATTTCTTTTGGTAACTGTAACCTCTCAGGCCGCCACAGCCACTCTCACTCTTCACCTCCTTTTGCGCCGTCAGATCTCTTCATTTTCCGCCGTTCTCCGTCGCAGCCATGCCCGGAGCTGGGAGTCACGATGTGGAGTGGCCGGCGAACCGCGTGAGGGAAACTTTCATGAACTTCTTCGAAGGCAAAAATCACGTCAACTGGAAGTCTAGCCCTGTCGTCCCTTCAACGACCCCACTTCTCTTTGCCAACGCTGGTATGAATCAGTTCAAGCCAATCTTTTTGGGAACTGCGGATCCTAACACTGCCTTGAGCAAACTCTCTCGTGCATATAATACTCAGAAGTGCATTCGAGCTGGTGGTAAACACAATGATCTTGATGATGTCGGGAAAGATACCTATCATCACACCTTCTTTGAGATGTTGGGCAATTGGTCCTTTGGGGATTACTTTAAAGAAGAAGCCATCAGCTGGGCATGGGAGCTTCTAACCAAAGTTTATATGTTACCATCGGATCGCATTTATGCCACATATTTTGGTGGTGATGATAAAGCTGGTCTTGCCCCTGATTTTGAGGCTAGAGATATATGGCTAAAGTTTTACCTCCTGGACGTGTGCTTCCTTTTGGCTGTAAACTTTTCTATGAAAAAGGGTTTGAGGGTTTCTGCAAACTGGGTTGCGCATTACCTAGCCAGTTTAGAGAGCGTGGCCAGTTTGGAGCAGCTGCCAGACAATTTCTGGGAGATGGGTGATACTGGTCCTTGTGGACCTTGCATCAAATACATTTTGACAGAATTGGTAATCGTGATGCTGCGCCATTGGTTAATAATGATGATCCTACCTGCATTGAGATATGGAACCTTGTTTTCATTCAGGCTTGGTTTTGAACGTTTAACCTCAATACTACAGAACAAAATGAGCAATTATGACACTGATGTCTTCTTGCCTATCTTTGACGGTATTCAGCAGGCAACTGGGGCCAGACCATATTCTGGAAAAGTTGGACCAGATGATGTTGATAAAGTTGACATGGCATACAGGGTTGTTGCTGATCACATCAGAACTCTTTCATTTGCCATTGCTGATGGATCTCGTCCTGGTAATGAGGGACGTGAGTATGTTCTGAGACGTATACTCCGCCGAGCTGTTCGGTATGGACGTGAAGTGCTAAAAGCTAAAGAGGGATTTTTCAATGGGCTTGTAAGTGTTGTGCTAAATGTGATGGGTGATGTTTTCCCTGAGTTAAAACAACAAGAAATGCACATCCGGAATGTAATTGAAGAGGAGGAGGAAAGTTTTGGACGAACCTTAATTAAGGGGATTGAGAAATTTGAGGCAGCTGTTCGGCATGTTCAGGGAAAGATACTGAGTGGAGAGGCAAGTAGAATCAGTTATCTTCAAACCGATAATTCCAATATTGTCATAATGGAAGCATTTGTCTTGTGGGATACATACGGGTTCCCATTAGATCTCACTCAGCTGATGGCTGAAGAAAAGGGATTAGTTGTTGATGTTAAAGGTTTTGATAGTGCTATGGAAGCTGCAAGAGAGAGATCCCGAAGTGCTCAAACAAAGCAGTTGGTGGTGCCATCATCATGGATGCTGATGCTACCTCAGCGTTGCATAAAAGGAGCATTGCCCCAACAGATGATAGCTTCAAATATGCTTGGTTCAAGAAGGGAAGGCATCATGAATAAAAAGAGAGACCATGAGAGTGTGGTAAGAGCAATATATACTGGTTTTGAGTTTGTTGATACTGTTAATACGGATGGTGATATTGGTGTAGTTCTGGAATCTACAAGCTTTTATGCTGAGCAAGGTGGTCAGATTTTTGATACTGGATCACTTGAGGGACCACATGCTTCATTTCAAGTTCGTAATGTTCAAGTTTATGGAGGCTTTGTTCTTCACATTGGTAATGGGAATGGTGTCTCTGTTGGTGACAAAGTAGTATGCAAGGTTGATTATGGAAGACGTGCTCTTATAGCCCCTAACCATACCTGCACTCACATGTTAAATTTTGCTCTTAGGAAAGGATCCATTGTTCTTCCTGAAAAATTGAGATTTGATTTTTCACATGGCAAGCCTGTTGATGCTGACAATTTAAGGAGAATTGAATTAATTGTTAATGAGCAAATTAAAGCTGAATTGGATGTGAGTGCAAAAGAGGCAACTCTTGCTGAAGCTAAGCGCATCAATGGTTTGCGAGCTGTTTTTGGGGAAGTCTATCCTGATCCTGTTAGAGTTGTATCCATTGGCCAAAAAGTTGAGGATCTCCTCGCTGACCCTGAGAATAAAAAATGGTTGTCTATTTCATCAGAGTTATGTGGAGGTACCCATATTTCAAACACACGAGAGGCAAAAGCTTTTGCACTTTTATCCGAGGAGGGAATTGCAAAAGGAATACGCAGAATAACAGCTGTTACAACTGACCGGGCTTATGAAGCAATGAGAGTGGCAGATGAATTCAAGCAGCAAGTAGATAATGCAGCTAAGCTAGAAGGAAGTTTGCTAGAAGAGCCTTGGGGAGATGGAAATTTGTGCTGCTGGGATGGATACTATAATGGTTTTTCATGTATTCTAAAAGTTTCATCACTGAAGAGCAACGTTGAAACTTTATCAATTCCTGCTGCCAAGAAAGCTGACATCAAGACCAAGATAGCCCAACTTCAGGATCAAGTGAGAAAAGCACAAAAGCAGGTTGCTGAGGAAAACAAACGTAAAGCTGTAATGATTACAGCTGAGAAGGCTGAACTTGCTGCTTCAAATGGGAAAACATTTTGCATATCTCATGTTCATGGCTTACCTGTGATGGTTTTTAGCACGGATGAATCTACAAACAAGGCTGTTGTTTGTGCTGGGGTGCCAGGGAAAGGAGCTAAAGGTAAGCTGGAGGTGACAGAGTGGCTGAGTAATGCTTTGGGGCCACTAAAGGGAGATGTGGTAAGGGAAAAGGTGGTCTTGCAACGGGTCAGCTCCTTGCCATTTAACCTAGCCGCCGCCTATCTACTGGTGCTTCCATTGACCTACCATGCCTCCTACTTCCAAACCCTCCAAGGACCTCGAAGATACTCTACAATCCCTCACCGAGAAGCTCACCTCCCTCAGTCTACAGCTTGA | 3336 | 0.4296 | MPGAGSHDVEWPANRVRETFMNFFEGKNHVNWKSSPVVPSTTPLLFANAGMNQFKPIFLGTADPNTALSKLSRAYNTQKCIRAGGKHNDLDDVGKDTYHHTFFEMLGNWSFGDYFKEEAISWAWELLTKVYMLPSDRIYATYFGGDDKAGLAPDFEARDIWLKFYLLDVCFLLAVNFSMKKGLRVSANWVAHYLASLESVASLEQLPDNFWEMGDTGPCGPCIKYILTELVIVMLRHWLIMMILPALRYGTLFSFRLGFERLTSILQNKMSNYDTDVFLPIFDGIQQATGARPYSGKVGPDDVDKVDMAYRVVADHIRTLSFAIADGSRPGNEGREYVLRRILRRAVRYGREVLKAKEGFFNGLVSVVLNVMGDVFPELKQQEMHIRNVIEEEEESFGRTLIKGIEKFEAAVRHVQGKILSGEASRISYLQTDNSNIVIMEAFVLWDTYGFPLDLTQLMAEEKGLVVDVKGFDSAMEAARERSRSAQTKQLVVPSSWMLMLPQRCIKGALPQQMIASNMLGSRREGIMNKKRDHESVVRAIYTGFEFVDTVNTDGDIGVVLESTSFYAEQGGQIFDTGSLEGPHASFQVRNVQVYGGFVLHIGNGNGVSVGDKVVCKVDYGRRALIAPNHTCTHMLNFALRKGSIVLPEKLRFDFSHGKPVDADNLRRIELIVNEQIKAELDVSAKEATLAEAKRINGLRAVFGEVYPDPVRVVSIGQKVEDLLADPENKKWLSISSELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYEAMRVADEFKQQVDNAAKLEGSLLEEPWGDGNLCCWDGYYNGFSCILKVSSLKSNVETLSIPAAKKADIKTKIAQLQDQVRKAQKQVAEENKRKAVMITAEKAELAASNGKTFCISHVHGLPVMVFSTDESTNKAVVCAGVPGKGAKGKLEVTEWLSNALGPLKGDVVREKVVLQRVSSLPFNLAAAYLLVLPLTYHASYFQTLQGPRRYSTIPHREAHLPQSTA | 1003 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g01218 | 1003 | SMART | tRNA_SAD_4 | 711 | 770 | IPR012947 | GO:0004812|GO:0005524|GO:0043039 | |
| Pste1g01218 | 1003 | Coils | Coil | 844 | 871 | - | - | |
| Pste1g01218 | 1003 | FunFam | Alanine--tRNA ligase, cytoplasmic | 619 | 785 | - | - | |
| Pste1g01218 | 1003 | ProSiteProfiles | Alanyl-transfer RNA synthetases family profile. | 11 | 783 | IPR018165 | GO:0003676|GO:0004813|GO:0005524|GO:0006419 | |
| Pste1g01218 | 1003 | SUPERFAMILY | Translation proteins | 546 | 618 | IPR009000 | - | |
| Pste1g01218 | 1003 | PANTHER | ALANYL-TRNA SYNTHETASE | 257 | 953 | - | - | |
| Pste1g01218 | 1003 | Hamap | Alanine--tRNA ligase [alaS]. | 1 | 977 | IPR023033 | GO:0004813 | |
| Pste1g01218 | 1003 | SUPERFAMILY | Class II aaRS and biotin synthetases | 12 | 273 | IPR045864 | - | |
| Pste1g01218 | 1003 | Gene3D | Bira Bifunctional Protein; Domain 2 | 12 | 229 | IPR045864 | - | |
| Pste1g01218 | 1003 | CDD | AlaRS_core | 13 | 269 | - | - | |
| Pste1g01218 | 1003 | SUPERFAMILY | ThrRS/AlaRS common domain | 618 | 788 | IPR018163 | GO:0000166 | |
| Pste1g01218 | 1003 | SUPERFAMILY | Putative anticodon-binding domain of alanyl-tRNA synthetase (AlaRS) | 274 | 491 | IPR018162 | GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 | |
| Pste1g01218 | 1003 | Gene3D | - | 619 | 786 | - | - | |
| Pste1g01218 | 1003 | PRINTS | Alanyl-tRNA synthetase signature | 311 | 327 | IPR002318 | GO:0000166|GO:0005737 | |
| Pste1g01218 | 1003 | PRINTS | Alanyl-tRNA synthetase signature | 254 | 267 | IPR002318 | GO:0000166|GO:0005737 | |
| Pste1g01218 | 1003 | PRINTS | Alanyl-tRNA synthetase signature | 88 | 99 | IPR002318 | GO:0000166|GO:0005737 | |
| Pste1g01218 | 1003 | PRINTS | Alanyl-tRNA synthetase signature | 335 | 348 | IPR002318 | GO:0000166|GO:0005737 | |
| Pste1g01218 | 1003 | FunFam | Alanine--tRNA ligase | 525 | 617 | - | - | |
| Pste1g01218 | 1003 | Pfam | tRNA synthetases class II (A) | 16 | 223 | IPR018164 | GO:0000166|GO:0004813|GO:0005524|GO:0006419 | |
| Pste1g01218 | 1003 | Pfam | tRNA synthetases class II (A) | 257 | 620 | IPR018164 | GO:0000166|GO:0004813|GO:0005524|GO:0006419 | |
| Pste1g01218 | 1003 | Gene3D | - | 527 | 618 | - | - | |
| Pste1g01218 | 1003 | Pfam | Threonyl and Alanyl tRNA synthetase second additional domain | 711 | 769 | IPR012947 | GO:0004812|GO:0005524|GO:0043039 |