Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01201 TCCAGGCTTGAAGTCAAACCCCTATTTCTCAAGGATATTTGTTCTTCTAACTCTCCATCCAATTCAGCACTTTTGCAAAGTGGCTTGAAATTGTTCCACAAGGGACAGATTATGATGGAGTTACCATATATTTGGATACTAAAACTGGTTGTGGCATGGGTTGTTTGTCTTCACATATTTATTAAATCGGCTTCTGCAACTGAAGGGTTTGAAAATATAGCATGCTGTGCTGATTCAAATTACACAGATCCGCAAACCACCTTAAAGTACACAACAGATTACAGATGGTTCCCTGATAAAGGAAGTTGCAGAAAAACTGAAAATGCGTTGAATGAAAAAGTTCGACTGTTTTTTATAGATGAAGGAAAGAGATGTTATAATTTGCCAACAATTAAGAATAAAGTATATCTGATAAGGGGCACATTTCCATTCTACAGTGTAAATTCTTCCTTTAGTGTTTCAATTGGGGTCACACAATTAGGTGCAGTGAGATCATCCAGGCTCCAGGGCTTGGAAATTGAGGGTGTTTTCAGGGCTACCAAAGACTACATAGATTTCTGCTTAGTGAAGGGGGAAGTGGATCCCTTTATTTATCAGCTTGAATTAAGGCCATTGCCTGAAGAGTATCTGCATGATTTGCCTGCCAGTGTTTTAAAACTGATAAGCAGAAATAGTCTTTGGGGCACAAAAGATGAAATCAGGTTCCCAATTGACCCAAGTGATAGAATCTGGAAAGCAACTTCAAGTCCATCATCTACTCTTCTACTTTCTTCCAATGTCAGCAATTTTGGCATCAAATCTAATGTGACACCACCTCTACAAGTTCTACAAACAGCTCTTTCCCACCCTGAGCGATTGCAGTTCATCCACAGTGACCTTGACAATGAGGATTATGAATATCGTGTATTTCTCTACTTCCTTGAATTAAATAGCACCGTCAAAGCAGGCGAAAGGGTTTTTGACATCTATGTTAATGGTGAGATTAAAAAGGAGGAATTTGATATATTGGCTGGAGGGTCCAACTATACATACACTGTCTTGAACGTTTCAGCAAATGGATTACTTAATATGACCTTGGTCAAGGCATCTGGAGCTGCGTTTGGACCCCTTTTGAATGCTTACGAGATCCTGCAAATGCGACCATGGATAGAAGAGACCAACCAAAAAGATGTGGAAGGGATTCAGAAGATTAGAGAAGAATTGTTGTTGCAAAACCAAGACAATAAAGTGCTAAAGAGTTGGACTGGAGACCCTTGTTTTTTCCCCTGGCAAGGAATATCATGTGATGGTTCAAATGGTTCGTCTGTTATCACTAAGCTGGATCTGTCCGCAAGTAATTTCGAAGGACCAATTCCTTCCAGTATCGCTGATATGACAAACTTAAAATTATTGAACCTAAGCCACAATGATTTCAATGGTTATATCCCCTCGTTTCCACTGTCCTCCTTGTTGATATCAATAGATCTGAGCTACAATGATCTTATGGGGTCACTTCCAGAATCAATTGTCTCACTGCCATACTTAAAATCATTGTATTTTGGCTGCAACAAACGCATGAGCGAAGAGGCTCCATCAAATTTGAACAGTTCACTAATCAATACAGATTACGGAAGATGCAAAGCAAAAGAACCTAAGTTTGGACAAGTATTCGTCATTGGTGCTATTACATGTGGATCACTTTTGATTACTTTGGCTGTTGGAATCATTTTTGTTTGCCGCTATAGACAAAAGTTGATTCCGTGGGAAGGATTTGGTGGAAAGAACTACTTAATGGAAACAAATGTAATATTCTCTTTGCCAAGCAAAGATGATTTCTTAATAAAGTCTGTATCAATTCAAACATTCACTTTGGAAGATATAGAGGTGGCCACAGAAAGTTACAAAACTTTGATTGGGGAAGGAGGATTCGGTTCTGTTTACCGGGGTACTCTAAATGATGGTCAAGAAGTGGCAGTGAAAGTCCGGTCAGCCACATCCACTCAGGGAACTCGAGAATTTGATAATGAGCTAAACCTACTCTCTGCAATACAGCATGAGAACCTGGTGCCTCTTCTTGGTTACTGTAATGAAAATGATCAACAAATTCTCGTGTATCCCTTCATGTCCAATGGTTCTTTGCAGGATAGACTCTATGGTAAACATTCCAATAATTCTTTCAGCTTATTTGTTTGTTGCCTATTAATTCTAAAATTCTACTTTACAACAGGGGAACCTTCAAAGAGAAAAATATTAGACTGGCCAACTAGACTCTCTATCGCTCTTGGAGCAGCTCGAGGCAAGATTCTAAGTCTAGCATATGGTAAAGATCAAGTTAGAATGGAAGATGGTGAGATTTGCAAGGAAAATAACACGGTAGAATGTTTGGCATATCTTCACACATTTCCAGGACGTTCAGTAATACACAGGGATGTGAAATCAAGCAATATACTTCTAGATCATAGCATGTGTGCTAAGGTTGCCGATTTTGGTTTCTCGAAATATGCTCCCCAGGAAGGAGACAGTAATGTTTCCCTTGAAGTAAGAGGAACTGCAGGGTACCTCGATCCCGAGTACTACAGGACCCAGCAATTATCTGAGAAGAGTGATGTCTTCAGCTTTGGTGTGGTTTTACTTGAAATTGTCAGTGGTAGAGAGCCTCTCGACATAAAGAGACCTCGGAATGAGTGGAGCCTAGTTGAATGGGCTAGACCATATATAAGAGCATCAAAGATGGATGAAATTGTGGATCCCGGCATCAAGGGAGGATACCATGCAGAGGCAATGTGGAGAGTGGTGGAAGTAGCACTGCAGTGTCTGGAACCCATCTCAGCATATAGACCGTGCATGGTTGACATCGTCCGCGAGTTAGAGGATGCTCTCATCATAGAAAACAATGCGTCAGAATACATGAAGTCCATAGATAGCCTTGGAGGATCCAACCGCTACTCTATTGTCATAGAGAAAAGGGTTCTGCCCTCAACTTCCTCAACAGCAGAATCAACTATAACCACCCAAGCATTGACCCATCCACAGCCGAGATAGTAAATGGGTGGATATGGAATTCTTTTGATTTGTTTTTCGTAATAACTGCTTTAGTCATAATATATTTCAAATGGTAAAGGAGAAAATACTACTCGTTTTTGCTATTGTACTTTCATCCACTCTAAGCATATTGAAACCAATTTCTCTTGCTCGGCCTCCTTTTTTATGAGTTGAAAGGAAGGATAAATTGGGTCAAATGCAAAAGGCCATATCATTTTTTGCCAAGTCCAAACTTGACTAGTTAAAAATTGCATAAACAAAATTCATTGTTATTTAATCAGGATAGTTGAACCGTGCATTCAACAGAGCTATAGACACTTTGGTTGGA 3349 0.3977 SRLEVKPLFLKDICSSNSPSNSALLQSGLKLFHKGQIMMELPYIWILKLVVAWVVCLHIFIKSASATEGFENIACCADSNYTDPQTTLKYTTDYRWFPDKGSCRKTENALNEKVRLFFIDEGKRCYNLPTIKNKVYLIRGTFPFYSVNSSFSVSIGVTQLGAVRSSRLQGLEIEGVFRATKDYIDFCLVKGEVDPFIYQLELRPLPEEYLHDLPASVLKLISRNSLWGTKDEIRFPIDPSDRIWKATSSPSSTLLLSSNVSNFGIKSNVTPPLQVLQTALSHPERLQFIHSDLDNEDYEYRVFLYFLELNSTVKAGERVFDIYVNGEIKKEEFDILAGGSNYTYTVLNVSANGLLNMTLVKASGAAFGPLLNAYEILQMRPWIEETNQKDVEGIQKIREELLLQNQDNKVLKSWTGDPCFFPWQGISCDGSNGSSVITKLDLSASNFEGPIPSSIADMTNLKLLNLSHNDFNGYIPSFPLSSLLISIDLSYNDLMGSLPESIVSLPYLKSLYFGCNKRMSEEAPSNLNSSLINTDYGRCKAKEPKFGQVFVIGAITCGSLLITLAVGIIFVCRYRQKLIPWEGFGGKNYLMETNVIFSLPSKDDFLIKSVSIQTFTLEDIEVATESYKTLIGEGGFGSVYRGTLNDGQEVAVKVRSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNENDQQILVYPFMSNGSLQDRLYGKHSNNSFSLFVCCLLILKFYFTTGEPSKRKILDWPTRLSIALGAARGKILSLAYGKDQVRMEDGEICKENNTVECLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGFSKYAPQEGDSNVSLEVRGTAGYLDPEYYRTQQLSEKSDVFSFGVVLLEIVSGREPLDIKRPRNEWSLVEWARPYIRASKMDEIVDPGIKGGYHAEAMWRVVEVALQCLEPISAYRPCMVDIVRELEDALIIENNASEYMKSIDSLGGSNRYSIVIEKRVLPSTSSTAESTITTQALTHPQPR 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01201 1006 Gene3D Ribonuclease Inhibitor 393 544 IPR032675 -
Pste1g01201 1006 Gene3D - 230 380 - -
Pste1g01201 1006 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Pste1g01201 1006 Gene3D Transferase(Phosphotransferase) domain 1 701 968 - -
Pste1g01201 1006 CDD STKc_IRAK 631 950 - -
Pste1g01201 1006 Gene3D Phosphorylase Kinase; domain 1 597 700 - -
Pste1g01201 1006 PANTHER OS07G0107800 PROTEIN-RELATED 73 953 - -
Pste1g01201 1006 FunFam Leucine-rich repeat receptor-like kinase 390 537 - -
Pste1g01201 1006 ProSiteProfiles Protein kinase domain profile. 625 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01201 1006 SUPERFAMILY Protein kinase-like (PK-like) 614 949 IPR011009 -
Pste1g01201 1006 FunFam Nodulation receptor kinase 590 700 - -
Pste1g01201 1006 SUPERFAMILY L domain-like 409 527 - -
Pste1g01201 1006 SMART serkin_6 625 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01201 1006 Pfam Protein tyrosine and serine/threonine kinase 629 949 IPR001245 GO:0004672|GO:0006468
Pste1g01201 1006 Pfam Malectin-like domain 77 378 IPR024788 -
Pste1g01201 1006 ProSitePatterns Protein kinases ATP-binding region signature. 631 653 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01201 Pste-Chr1 3826842 3835953 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01201 54 956 Receptor kinase-like Gene Family AT1G67720 32.275 2.18e-121 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pste1g01201 PK_Tyr_Ser-Thr 8.9e-40 CL0016