Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01184 ATGTACTTGAGGAGAATACAGTGCAGAGATCGGACATGGGCTTTAGTGTTACAGCCATCGAAATACTTCTTTAGGCCAAGATTATCTGATCATCGATACTTTCAATCTTTATCACCTAAGACCACTGTGGAAGAATATGCTTCACATACTTCATCAAGAAATAGTTTCACTGGTTTGGACACGAGGCGTAGTTTATGTCTTAACCATACCAGGTTACGTGCCTATAGTTCAGAAAGTGATGGAAGAAATGCAAGTGACAATAAACATGTACGTGTTAATGATGGAACTGACTTTGATAAAGGACAGAATCAACCAGAGAAGCTTTGGAGAGATGTTAAGTACTGCAATGCACATGCACGACTTGGAGAACAAGAACAAGAGGAATGGCTTAATAATGAGAAGCTAGCTATTGAAAATAAAAGGAGAGAATCACCATTTTTGACAAGAAGGGATAAGTTTAAAAATGAGTTTATAAGAAGAATTATTCCTTGGGAGAAGATAAACATTTCCTGGGACACATTTCCTTATCACATTCATGAGAATACCAAAAATCTTCTGGTGGAATGTGCTGCTTCCCATTTGAGACATAATAAGTTTGCTTCATCTTTTGGCACTCGCCTCACATCTTCAAGTGGGAGAATATTGCTTCAGAGCATTCCTGGCACTGAACTGTATCGTGAGAGATTGGTTAGAGCACTTGCACAAGAATTACAAGTTCCTCTTTTAGTGCTTGATAACAGCATCCTTGCTCCTTATGATATTGATGATGATTTATCATCAGACTATGAGTCTGATGATGATAATGGAGAGTCTGGGGAGGAGGGTTCTCTGGAATCTGAGAATGAGGATGATAATGAAGCTAGTAATGAAGAAGAGTGGACCAGCAGTACTGAGGCAAAGTCTGATGCAAGTGATAATGAAGATGCAGTAGCGTCTGCTGAAGCACACCTTAAGAAGGTTAAAGCAGCTGTTCTTCGGAAACTTGTCCCTTATAATGTTGAAGAATTTGAAAAGATAGTGTCGGGAGAATCTGAGAGTTCTGAGCCATCCAAATCAAATGATGCCAAATCTTCTGATAAGTCTGGATGCCAGCTAAGAAAAGGTGACCGTGTGAAGTACATTGGACCATCTGTTCAAGTTACAGATGAGGATAGGATCATACTGGGGAAGATACCAACATCTGATGGTCCAACTAATGCTTATACTATTATACATGGCAGGCCTTTAACTAATGGTCAGAGGGGAGAGGTATATGAGGTTAATGGTGACCGAGTTGCCGTCATCTTGGATATTAATGAAAGCCAGGCAGAGACCCTTAATGATGGTCATACCAAACCCCCAATTTATTGGATACATGTTAAGGACATTGAGAATGATCTTGATGCTCAATCACAGGATTGCTACATTGCAGTGGAGGCTTTATGTGAGGTTTTGCATTGCAAACAACCTCTTATTGTCTATTTTCCTGACAGTTCACAGTGGTTACATAAATCAGTTCCTAAGTCAAACCGAAATGAGTTTTTTCATAAGGTTGAGGAGATGTTTGACCAGTTATCTGGCCCTATAATATTGATTTGTGGGCAAAACAAAGTTCAGTCAGGATCAAAGGAGAAAGAACAATTTACTATGATACTTCCAAACTTTGGGCGTGTTGCTAAGCTGAAAGGGACTTCTCTGGAATCAGAGGTAGTGAGGCACGCGCAATCAGAACTCGGAAGCTATGGCAGAATGGGGCTTCGGGCCTTCGAGGGAATTGGAATTGTGTCTGCCTTGCGCATGGCACGTTGCTTCCTGCATGGGCAGCCTCTTTCTCTGAAGCGTTGGACTGAGGGAATTAAAGGGGACAAGACATCTGAAGATGATGAAATTAACAAGCTCTTTTCTAATGTTTTAAGTATACATCCACCCAAGGATGAGAATCTGCTGGCAACATTCAAGAAACAACTCGAGGAAGATAAGAAAATTGTGATTTCACGTAGTAATTTGAATGTATTACGGAAGTGTCCAATGATATTATATGATGTTATCCACAATCTTGCTACCTTAACCATGACAGACCTTGATCTTCCTTATTGTCGTAGAACACCATCTGCCATTCATGAAATCAAAACTCTCATGCCCTCTGATGATGCTGCGACGATATCTGAAAAATTGAATCATATGTGCATGGTGTATATTTTCCATGGCCTCCATAAAGACTTTGAATCAATTCGTTGTGACAATCGCAAGTGTGGTAGAGGTGCTAATAGTGGACCCGAGGGTGGTCATAGTGCTGGAGAAGCTGAGAAAGTGGTGGGTTGGGCAAAAAATCATTACTTGTCATCATGCTTGCTTCCTTCTATTAAAGGAGAAAGATTGTGCCTACCTCGTGAAAGTCTCAAGATTGAGGAGCCAGGAAACTATGTCACGGAAGCCTTCTCAAAGCCTCAAGGCATGTGGTTTTTCTTGAATCTTGCAAAGGATGAGTTTGAGAGCAATTTCATTTCAGCTGTAGTACCTCCTGGTGAAATTGGGGTGAAGTTTGATGACATTGGTGCTCTTGAAGATGTGAAAAAGGCACTTCATGAACTCGTTATTCTTCCAATGAGAAGGCCAGAGCTTTTCTCTCATGGAAATCTGTTGCGGCCCTGTAAAGGAATATTACTTTTTGGTCCTCCTGGCACTGGAAAAACCCTTCTGGCCAAGGCACTTGCCACTGAAGCTGGTGCAAATTTTATCAGCATAACTGGTTCTACCCTTACTTCTAAGGTTGACAGTTTACTTGGTGCTCGTGGAGGTGCTTTTGAGCATGAGGCCACTAGAAGAATGAGGAATGAGTTCATGGCAGCTTGGGATGGATTGAGGTCAAAAGAAAACCAAAGAATCCTTATTCTTGGTGCAACAAACCGACCGTTTGACCTTGATGATGCTGTTATACGTCGCTTACCAAGAAGGATATATGTTGATTTACCAGATGCTGAAAATCGAATGAAGATTTTAAGAATCTTTCTTGCACAAGAAACTTTGGATTCTGATTTTCAGTTTGACAAACTTGCTAACTTGACCGATGGATACTCTGGCAGTGATTTGAAGAACCTCTGTATTGCTGCAGCATATAGACCTGTTCAAGAACTCTTAGAGGAAGAAAAGAAGGGAGCCAGTAATGGTACAACTTCAGTCCTAAGACCGCTTAATTTGGATGATTTTATTCAGTCAAAATCAAAGGTGGGTCCATCAGTTGCCTATGACGCAACTACCATGAATGAGTTGAGGAAGTGGAACGAAATGTACGGAGAAGGTGGTAGTAGAACAAAATCACCATTTGGATTCGGGAGCTGATTTGGATGGTGGTTAAATCACTAACTTATCACCAAGCTTCTTACCAAAGCAGTTTACCGGACAAGGCAAAGAGCTCTAGATAGATAGATTTTCAGCATATACTTTTCAACGGCCTCTGCATTTCCCATCCTTTGCCAAATTATTCGGTACAAGCAGTGTTTTTCCCAAATTTATTCATACGAATTGGTTCTGTTTTAGGAGGGAGGCTGTTTCAAGCTCCATGTTGAGCTGATGAGTTATTCAGTTTAATGTGTCGTAACGAAATGTAGATAGCCTCTAATTTTGTTTAGGGAATGTGCAATCTTATTTATGTTTGAACGGTAAGGGTAATTTCCCCAATTATATTTATAATGTGCTGTTCTCAGCCTTTTCTTTTTGAACCCTGAATTTTTATTTTTGCACCTCCCTAAATTTTAAAAAATT 3741 0.4044 MYLRRIQCRDRTWALVLQPSKYFFRPRLSDHRYFQSLSPKTTVEEYASHTSSRNSFTGLDTRRSLCLNHTRLRAYSSESDGRNASDNKHVRVNDGTDFDKGQNQPEKLWRDVKYCNAHARLGEQEQEEWLNNEKLAIENKRRESPFLTRRDKFKNEFIRRIIPWEKINISWDTFPYHIHENTKNLLVECAASHLRHNKFASSFGTRLTSSSGRILLQSIPGTELYRERLVRALAQELQVPLLVLDNSILAPYDIDDDLSSDYESDDDNGESGEEGSLESENEDDNEASNEEEWTSSTEAKSDASDNEDAVASAEAHLKKVKAAVLRKLVPYNVEEFEKIVSGESESSEPSKSNDAKSSDKSGCQLRKGDRVKYIGPSVQVTDEDRIILGKIPTSDGPTNAYTIIHGRPLTNGQRGEVYEVNGDRVAVILDINESQAETLNDGHTKPPIYWIHVKDIENDLDAQSQDCYIAVEALCEVLHCKQPLIVYFPDSSQWLHKSVPKSNRNEFFHKVEEMFDQLSGPIILICGQNKVQSGSKEKEQFTMILPNFGRVAKLKGTSLESEVVRHAQSELGSYGRMGLRAFEGIGIVSALRMARCFLHGQPLSLKRWTEGIKGDKTSEDDEINKLFSNVLSIHPPKDENLLATFKKQLEEDKKIVISRSNLNVLRKCPMILYDVIHNLATLTMTDLDLPYCRRTPSAIHEIKTLMPSDDAATISEKLNHMCMVYIFHGLHKDFESIRCDNRKCGRGANSGPEGGHSAGEAEKVVGWAKNHYLSSCLLPSIKGERLCLPRESLKIEEPGNYVTEAFSKPQGMWFFLNLAKDEFESNFISAVVPPGEIGVKFDDIGALEDVKKALHELVILPMRRPELFSHGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRSKENQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQETLDSDFQFDKLANLTDGYSGSDLKNLCIAAAYRPVQELLEEEKKGASNGTTSVLRPLNLDDFIQSKSKVGPSVAYDATTMNELRKWNEMYGEGGSRTKSPFGFGS 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01184 1105 Gene3D - 838 916 IPR027417 -
Pste1g01184 1105 MobiDBLite consensus disorder prediction 340 367 - -
Pste1g01184 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 838 1032 IPR027417 -
Pste1g01184 1105 SMART AAA_5 876 985 IPR003593 GO:0016887
Pste1g01184 1105 MobiDBLite consensus disorder prediction 256 291 - -
Pste1g01184 1105 ProSitePatterns AAA-protein family signature. 955 974 IPR003960 GO:0005524|GO:0016887
Pste1g01184 1105 Gene3D - 984 1069 - -
Pste1g01184 1105 Pfam ATPase family associated with various cellular activities (AAA) 880 916 IPR003959 GO:0005524|GO:0016887
Pste1g01184 1105 Pfam ATPase family associated with various cellular activities (AAA) 917 982 IPR003959 GO:0005524|GO:0016887
Pste1g01184 1105 MobiDBLite consensus disorder prediction 340 368 - -
Pste1g01184 1105 MobiDBLite consensus disorder prediction 255 310 - -
Pste1g01184 1105 MobiDBLite consensus disorder prediction 293 310 - -
Pste1g01184 1105 MobiDBLite consensus disorder prediction 77 97 - -
Pste1g01184 1105 Pfam AAA+ lid domain 1005 1040 IPR041569 -
Pste1g01184 1105 MobiDBLite consensus disorder prediction 82 97 - -
Pste1g01184 1105 Gene3D - 917 1087 IPR027417 -
Pste1g01184 1105 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 152 1098 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01184 Pste-Chr1 3780148 3823516 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01184 795 1043 Calmodulin-binding Proteins AT3G56690 31.010 2.74e-27 118