Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01150 ATGTTAGCTTTTGGAAACGTTACTTTGAGTTCCACACTCTCCACCAAGGACAGTGATGCATGGCTTTCACCTTCGGGTGAATTTGCTTTTGGATTTCGCCAACTTAATGGCACAAGGGCAAGCCTGTTCATGGTTGCCATCTGGTATGACAAAATACCACCCAAGACCATTGTTTGGAATGCAAAGGTAAATGAAAGCCTTGCAACAACATCAAGAGGATCAGAGGTTCATCTCACATCAGGAGGGCTCGTGTTGAAAACTCGAGAAGGAGAATCAATATGGATAGCACAATCAAACGCCACTGTTTCCTACGGAACTATGCTTGACACCGGCAACTTTGCTCTTGTAAACAAGAATTCTACTTTTGTATGGGAAAGTTTCAACCACCCTTCAGACACGTTGTTGCCTAGCCAATCTTTGGAGCTAGATGGCAAGTTAACTTCTAGACTCGCAGATTCCAATTACATGAGAGGAAGGTTCCAGCTATATTTTAAGGATGGTGTTCTCCTTCTAAGTCCACTTGCTTGGCCTGCCCAACTACAGTACAGATATTATTACAGAATTAATGCTTCCCACCCTCTTTCACGTTTAGTGGCAACACTTGACTTCAGTGGAGTTTTCACGCAGTATGCTCATCCAAGGAGCACAAATGGCCAACAAGGTTGGACCATTATGCGGTATGTTCCTAACAACATTTGCACAGCAATATTCAGTGACTATGGTAGCGGTGCCTGTGGGTATAATAGCTATTGCTCCATGGAAAACAATAGGCCTACTTGCAAATGCCCTTATGGCTATTCACTGGTGGATCCAACTAATCAATTCGGTGGATGCCAACCCAATTTCAACCTCGCCTGTGGGGTGGATGTTCAAGCACAGCCAGAAGTATTATATGAAATGCATGAATTCAGAAATTTTAATTTTCCTTTGGGAGATTATGAAAGGATACAACCCTACACTCAACAGGAATGCCGGCAATCTTGCTTGCACGATTGCATGTGTGCTCTTGTCATTTTAAGTGGCGGGGACATGTGTTGGAAGAAGAGATTTCCCCTCAGTAATGGAAGACAACTGCCAGTCAATAGTAGTCAACATATTGTGTACATCAAAACAAGAATAAATCATGATTTTTATCCTCATAGAAACAGGGAACTTCAACCCGGTACTAATTCAAAGAAAGATCGAGCCAAGCCAATTCTTTTTGGATCACTTATTGTCTCCCTTGTGGTTAACAGTATTCTCATAGCTGCGGTTGCTTTGCTTGTTCTCTTCAAGTCGAGAGTAAAAATGGTCTTTGTACAAGCTGCAAGTCTTTTGGAAACAAACTTGCATCATTTCACTTATCAAACATTGGAAAAAGCCACACGGGGTTTTAGTGAGGAAATAGGCAGGGGCTCCTTTGGCATTGTTTACAAAGGCCTACTAGAAGCACCTTCTTGTAATGTGGTTGCCGTCAAGAGATTGGACAGATTGGCAAAAGAACGAGAAAAAGAATTTAGGACTGAATTGAGTGCCATTGGTAAAACCTACCACAAAAATCTTGTGAAGTTGATCGGATTTTGTGACGAGGGAATCAACAGACTGTTGGTCTACGAGCTCATGAGCAATGGTTCTCTTGCAAACATCCTATTTGGACAATCCAAACCCAATTGGAATGTAAGAGTTGGATTTGCTTTGGGGATTGCAAGAGGGTTGGTGTACTTGCACGAAGAGTGTGATGCCCCCATCATTCATTGTGATATTAAACCTCAGAATATACTCATAGATGAACATTTCAATGCAAAGATCTCTGACTTTGGGTTGGCAAAGTTGTTGTTGTCAGACCAAAATAGAACCAGTACCATGAACTCGAGGATATGTGGCTCCTGA 1869 0.4216 MLAFGNVTLSSTLSTKDSDAWLSPSGEFAFGFRQLNGTRASLFMVAIWYDKIPPKTIVWNAKVNESLATTSRGSEVHLTSGGLVLKTREGESIWIAQSNATVSYGTMLDTGNFALVNKNSTFVWESFNHPSDTLLPSQSLELDGKLTSRLADSNYMRGRFQLYFKDGVLLLSPLAWPAQLQYRYYYRINASHPLSRLVATLDFSGVFTQYAHPRSTNGQQGWTIMRYVPNNICTAIFSDYGSGACGYNSYCSMENNRPTCKCPYGYSLVDPTNQFGGCQPNFNLACGVDVQAQPEVLYEMHEFRNFNFPLGDYERIQPYTQQECRQSCLHDCMCALVILSGGDMCWKKRFPLSNGRQLPVNSSQHIVYIKTRINHDFYPHRNRELQPGTNSKKDRAKPILFGSLIVSLVVNSILIAAVALLVLFKSRVKMVFVQAASLLETNLHHFTYQTLEKATRGFSEEIGRGSFGIVYKGLLEAPSCNVVAVKRLDRLAKEREKEFRTELSAIGKTYHKNLVKLIGFCDEGINRLLVYELMSNGSLANILFGQSKPNWNVRVGFALGIARGLVYLHEECDAPIIHCDIKPQNILIDEHFNAKISDFGLAKLLLSDQNRTSTMNSRICGS 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01150 622 Gene3D Transferase(Phosphotransferase) domain 1 534 622 - -
Pste1g01150 622 ProSiteProfiles Protein kinase domain profile. 456 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01150 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 576 588 IPR008271 GO:0004672|GO:0006468
Pste1g01150 622 FunFam Os07g0541700 protein 534 622 - -
Pste1g01150 622 SMART serkin_6 456 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01150 622 Pfam Protein kinase domain 459 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01150 622 Gene3D - 4 129 IPR036426 -
Pste1g01150 622 ProSitePatterns Protein kinases ATP-binding region signature. 462 486 IPR017441 GO:0005524
Pste1g01150 622 ProSiteProfiles Bulb-type lectin domain profile. 6 128 IPR001480 -
Pste1g01150 622 Gene3D Phosphorylase Kinase; domain 1 421 533 - -
Pste1g01150 622 Pfam D-mannose binding lectin 56 144 IPR001480 -
Pste1g01150 622 SUPERFAMILY Protein kinase-like (PK-like) 439 621 IPR011009 -
Pste1g01150 622 SUPERFAMILY alpha-D-mannose-specific plant lectins 43 167 IPR036426 -
Pste1g01150 622 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 13 614 - -
Pste1g01150 622 SMART blect_4 12 130 IPR001480 -
Pste1g01150 622 FunFam S-receptor-like serine/threonine-protein kinase 426 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01150 Pste-Chr1 3699779 3701758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01150 391 622 Receptor kinase-like Gene Family AT5G45780 42.683 2.19e-43 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g01150 Pkinase 1.9e-33 CL0016