Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01148 CCTGTAATTGAATCCATGGCTCCCTTAACCCTCCTTATTGCTACAGTCATCTATCTTCATGGCTTTTCCTTAGCTTCTGTAAATGTTAGTCTGAACTCCCCACTTTCGACTAACACCAATGATGTGTGGCATTCACCTTCGGGAGAATTTGCTTTTGGTTTTCGTCCACTCAATAATGATACGGACCCCAACAGCAAGGTGTTCATGGTTGCCATCTGGTACGACATGATACCTGACAAGACCGTTGTTTGGAGTGCAAGAAATGGCTACGAACTGATCACAGAAGGGCTCGTGCTATCAGGTCCCCAAGGAGATTCCATTTGGATGACAAATTTAAAAGATATTGTATCCGAAGGAGCTATGCTTGACGATGGCAACTTTGTTCTCCTAAACGGGACCTCAGATTACGTGTGGCAAAGTTTTGACAATCCCACAGACACGTTGTTGCTTAACCAATCCCTCAATGGCAACCTAACTTGTCGATTCACAGACACCAATTACACAACTGGAAGGTTCCAACTTCATTTTAAGGATGGTAATGTCTTGCTGAGTTCTCAACTGCCTTACAAATCTTATCATGTAATTGATGCCTCTGGCAATGCTTCACGATTGGTGTTCGATCAATCAGGGTTGAATTATCACAGAGCAACGCTTGACTTCAATGGAGTTTTCACTCAGTATGCTCATCCCAGGAACACCAATGCTCAGCCAGGGTGGAGAATCGTGAGGTATGTTCCTGACAACATTTGCAATGACATATTTAACGACTATGGTAGCGGTTCTTGTGGCTATAATAGCTACTGCTCCATGGAGAATCAGAGGCCTACTTGCAACTGCCCCTATGGGTATTCACTGGTGGATCCAAGTAATGAATTTGGTGGATGCCAGCCCAATTTCACCCTCGCCTGTGGAGCCGATGTTCACTCTCCGCCACAAGAGCTATATGAAATGCATGAATCCACAAATTTTAATTTTCCTCTTGGAGATTATGAAACGATACAACATTACTCTCGACAGCAATGCCAACAATCTTGCTTGCACGATTGCAATGATCAACATGTTGTGTATATCAAAACAAGACTTAGTCCAGATTTTTCCCCTGGTGCTGCTGATTCAAAGAAGGAAGATAGAGCTAAGCCAATTCTTTTGGGATCCCTTATTGGCTCCCTTGTCATTACTGGTATACTCCTGGTTGTGGTTACTTGGTTTATTCTCTTGAAGGTGAAACAGAAAATGGTTGTCCCAGCTGCTACTCCTACTCTTTTGGAAGCAAATTTGCATTCGTTTAGTTATGAAACATTGGAAAAAGCTACGTGGGGGTTTAAGGAGGAAGCAGGCAGGGGTTCTTGTGCCATTGTCTATAAAGGCCAACTAGAAGCGAGTTCTTGTAACTTGGTTGCGGTCAAGCGATTGGACAGATTAGCACAAGAACGAGATAAAGAATTTAGAACTGAATTGATTGCCATTGGTAATACCTGTCACAAAAATTTGGTAAGGTTGATTGGATTTTGTGATGAAGGGGTCAATAGACTACTGGTTTACGAGTACATGAGCAATGGTTCTCTTGCAGACATCCTATTTGGACAATCCAAACCCCATTGGAATGCAAGGGTTGGATTTGCTTTGGGGATTGCCAGAGGGTTAATGAACACTGGAACTCGAGGATACGTAGCTCCTGAGTGGTTCAAGAATGTTGCTGTGACGAATAAGGTGGATGTTTATAGCTTTGGGGTAATGTGGTTGGAAATTATTAGCTGCAGAAGGAGTGTGCTGACGATAGAGTATGGGGAAGAAGAGAAGGCGGTACTCACAGATTGGGCTTGTGACTGTTATATGGAAGGGAGAATAGATGCTCTGGTGGAGAATGATGAGGAAGCCTTGTCTGACATTGATAGATTACAGAACTGGCTCAACATAGGAATATGGTGCATTAATGAGCAACCTGAAATGAGGCCAACAATGCCAATTGTCATGCAAGTGCTACAAGGTTTTGTTCAAGTCCCCAACCCACCACTGCCTTTTTCCATTCATTCCATATCTTAA 2043 0.4317 PVIESMAPLTLLIATVIYLHGFSLASVNVSLNSPLSTNTNDVWHSPSGEFAFGFRPLNNDTDPNSKVFMVAIWYDMIPDKTVVWSARNGYELITEGLVLSGPQGDSIWMTNLKDIVSEGAMLDDGNFVLLNGTSDYVWQSFDNPTDTLLLNQSLNGNLTCRFTDTNYTTGRFQLHFKDGNVLLSSQLPYKSYHVIDASGNASRLVFDQSGLNYHRATLDFNGVFTQYAHPRNTNAQPGWRIVRYVPDNICNDIFNDYGSGSCGYNSYCSMENQRPTCNCPYGYSLVDPSNEFGGCQPNFTLACGADVHSPPQELYEMHESTNFNFPLGDYETIQHYSRQQCQQSCLHDCNDQHVVYIKTRLSPDFSPGAADSKKEDRAKPILLGSLIGSLVITGILLVVVTWFILLKVKQKMVVPAATPTLLEANLHSFSYETLEKATWGFKEEAGRGSCAIVYKGQLEASSCNLVAVKRLDRLAQERDKEFRTELIAIGNTCHKNLVRLIGFCDEGVNRLLVYEYMSNGSLADILFGQSKPHWNARVGFALGIARGLMNTGTRGYVAPEWFKNVAVTNKVDVYSFGVMWLEIISCRRSVLTIEYGEEEKAVLTDWACDCYMEGRIDALVENDEEALSDIDRLQNWLNIGIWCINEQPEMRPTMPIVMQVLQGFVQVPNPPLPFSIHSIS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01148 680 Gene3D Transferase(Phosphotransferase) domain 1 549 671 - -
Pste1g01148 680 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 178 IPR036426 -
Pste1g01148 680 Gene3D - 24 185 IPR036426 -
Pste1g01148 680 Pfam Protein tyrosine and serine/threonine kinase 556 659 IPR001245 GO:0004672|GO:0006468
Pste1g01148 680 Pfam Protein tyrosine and serine/threonine kinase 442 548 IPR001245 GO:0004672|GO:0006468
Pste1g01148 680 Gene3D Phosphorylase Kinase; domain 1 406 516 - -
Pste1g01148 680 ProSiteProfiles Protein kinase domain profile. 439 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01148 680 FunFam S-receptor-like serine/threonine-protein kinase 408 516 - -
Pste1g01148 680 Pfam D-mannose binding lectin 95 158 IPR001480 -
Pste1g01148 680 SUPERFAMILY Protein kinase-like (PK-like) 434 675 IPR011009 -
Pste1g01148 680 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 549 - -
Pste1g01148 680 SMART blect_4 32 144 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01148 Pste-Chr1 3694370 3696600 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01148 362 667 Receptor kinase-like Gene Family AT1G56120 30.579 2.22e-37 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g01148 PK_Tyr_Ser-Thr 4.1e-06 CL0016