Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01140 CCTCACTCTTCTTGAATCCTCATCTCTTATTCTTATCATATTCATACCCTCCACTCACTTAGAATTAGCAGAAACAAAGAAAGAGAGAGAGAGTAATGTAGTGTTGCTGCCTCTCTGGACATGGACACGCCAGAGAGGAACAAGATTAGTGCTACCCTCTCCAAGTTTGAGGATTCACCAGTTTTCAACTACATCAATAGTTTGTCTCCTATAAAGCCGGTTAAGTCTGTTCCCATTAGTCAAACTTTCAATTCCCTGAGCTTTTCATCCCCTCCATCGGTTTTCACATCACCCCATGTTAGCCATCTCAAGGAATTCCTCCGGAGACATAATAATCCGTTGGGCACATCAAAGCCTAAGGTTTCTTCTGAAGATGTAAATAAAGATCACTCAAATGAAGAGACTCTTGCAGATTCTACTCGTGCACATCATAATCAATTGCAGGAAAACACTGACAAAGAGATTGTAAGAGATGCTTCAATTGAGCTATCTAGCGAGCAAACAAAATTCTCAGTTGAGCTACCCCAAGCTTTGAAATATAACAACAATTGTGGTAGCCTTGGCTACGATCCTCCACTTTGTGGTGATGAGGCTAACTCTCTTTTGGAATTGCCTGGTGAGACAGTGACAGATTATGTTCCAGTTGAGGGTGAAGTGCATCTTGAGGAAATATGTGAAATAGAGCCAAAGAGTGAAGGTCAACTCAGTTATTGGGATAGTTTAATTCCTGATGCCCCTGATATGCTAATTTTTAATTCCCCGGGTGAAGCAGAAGCTTGTAAGGGTCTACTGCACAAACCCTTGGTCTCTTCTATACGACTGAGCGATTATATGTCTATGCTACCACATTCTACCATCAATAATGGTAGCAAAATGAACAATGCTGATTCAGTTGTTTCTGGTTCTGAACATGAAGTTGAAAATCATTGTTCTGAGCCAATAACAGCCACAGGTAAAACACAAGATAATCTTGCCAGTGTTGCTTTGGTGACTACCAATCCAAATGAGAAAGCCAATGAACAGCTTGTTTATGTCACACACCGGACCATTAGGAGGCGCTGTCTAGACTTTGAGATGGCTAATGTGCAAAGGAAGAATTCTGGTGATAACTCAACAGCCGGTTCTGGTACATCTGAGTCTGATGAAAGGAATGTTGCTAATGAAAAGCAGTTGCTTCCTGCAAAACGCAATGGGAATTTACAAAGGGGAATTTTGCCTGGAATTGGTCTGCACTTGAATGCAATTGCTGCCTTAAAAGAGTACAAGGGCATACAAAATGAAAAGTTGTCTTCTGGAAGACAACTTAGTCTGCCCAGCTCTACTTCTTTGCAACTCTCTACAAGCCAAGAAAATCACAATCTATCATTGGTACCTGTATCATCTGAAAGAGAATTGGATCCATCAGGCAATGGGGTTCAGCCTGCTGAAGATTGTTCCCAGCTGTCAGCTTACATGGCTGGTGAAGACTTCAATCAGAATAGCCCCAGAAAGAAAAGGCAACCTTATACCAAGTTGGATTTGCAGGCTTATTGTGAGTGCTTTGCTGCGGGTGTCTACTGTATAGAACCCTGCTCCTGCCAGGATTGCTTCAACAAACCTATTCATGAAGACACTGTTCTTCAAACACGCAAGCAGATTGAATCTCGTAACCCTCTTGCATTTGCTCCTAAAGTCATCAGAAGTTCTGACTCTGTACCTGAAGTTGGGGATGATCCAAATAAGACTCCAGCTTCGGCCCGACACAAAAGAGGATGCAACTGCAAAAAATCAAACTGCCTAAAGAAATATTGTGAATGTTATCAGGGTGGTGTCGGGTGCTCCATTAGCTGTAGATGTGAAGGGTGCAAGAATGCTTTCGGTAGAAAGGATGAAACTGAGTCAGAAGAAACAGAAACATCTGACAAGATTGTGGCAGAAAAATCTATACTAAAAACTGAAATTCGGAATACTGAAGATCATCCAGATTGTGCTAGTGTGTCAACACCATTACGGCTTTCCAGACCATTGCTTCCATTGCCCTTTTCATCAAAGGGAAAGCCACCAAGATCTTTTGTTACAACCATCTCTAGCTCTGCATTATTTGCCACCCAAAAGCTTGGAAAACCAAACCCTCTTTGGTCTCAAGCTAAGCATTTTCAAGCTGTCCCAGATGATGAAATGCCAGACATTCTCCAAGGTGATATCTCTCCTATCAGTTGCATCAAAACCTCTCCAAATGGCAAAAGGATCTCCTCCCCTAACTTGGGATCATCTCCTAATCTCTCCAGAGGTGGCAGGAAGTTGATATTACAATCCATTCCTTCATTTCCTTCTCTCACTCCTCACCCTTAG 2331 0.4221 MDTPERNKISATLSKFEDSPVFNYINSLSPIKPVKSVPISQTFNSLSFSSPPSVFTSPHVSHLKEFLRRHNNPLGTSKPKVSSEDVNKDHSNEETLADSTRAHHNQLQENTDKEIVRDASIELSSEQTKFSVELPQALKYNNNCGSLGYDPPLCGDEANSLLELPGETVTDYVPVEGEVHLEEICEIEPKSEGQLSYWDSLIPDAPDMLIFNSPGEAEACKGLLHKPLVSSIRLSDYMSMLPHSTINNGSKMNNADSVVSGSEHEVENHCSEPITATGKTQDNLASVALVTTNPNEKANEQLVYVTHRTIRRRCLDFEMANVQRKNSGDNSTAGSGTSESDERNVANEKQLLPAKRNGNLQRGILPGIGLHLNAIAALKEYKGIQNEKLSSGRQLSLPSSTSLQLSTSQENHNLSLVPVSSERELDPSGNGVQPAEDCSQLSAYMAGEDFNQNSPRKKRQPYTKLDLQAYCECFAAGVYCIEPCSCQDCFNKPIHEDTVLQTRKQIESRNPLAFAPKVIRSSDSVPEVGDDPNKTPASARHKRGCNCKKSNCLKKYCECYQGGVGCSISCRCEGCKNAFGRKDETESEETETSDKIVAEKSILKTEIRNTEDHPDCASVSTPLRLSRPLLPLPFSSKGKPPRSFVTTISSSALFATQKLGKPNPLWSQAKHFQAVPDDEMPDILQGDISPISCIKTSPNGKRISSPNLGSSPNLSRGGRKLILQSIPSFPSLTPHP 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01140 736 SMART CXC_2 454 495 IPR033467 -
Pste1g01140 736 SMART CXC_2 540 581 IPR033467 -
Pste1g01140 736 ProSiteProfiles CRC domain profile. 456 580 IPR005172 -
Pste1g01140 736 MobiDBLite consensus disorder prediction 82 109 - -
Pste1g01140 736 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 467 492 IPR005172 -
Pste1g01140 736 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 543 578 IPR005172 -
Pste1g01140 736 MobiDBLite consensus disorder prediction 69 109 - -
Pste1g01140 736 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 1 735 IPR044522 GO:0003700
Pste1g01140 736 MobiDBLite consensus disorder prediction 323 341 - -
Pste1g01140 736 MobiDBLite consensus disorder prediction 695 718 - -
Pste1g01140 736 MobiDBLite consensus disorder prediction 321 345 - -
Pste1g01140 736 MobiDBLite consensus disorder prediction 695 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01140 Pste-Chr1 3669547 3674577 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01140 16 735 CPP Transcription Factor Family AT4G14770 41.260 3.86e-132 404
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Pste1g01140 TCR 1.6e-11 No_clan