Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01137 TCATTACTCATGGCAAATCCTATTGAAATTTCTGCTCTCAACAGCATCAAACTGCATCTCCTTGGAGAACTTTCTCCCCTTTCATTTTCTTCCTCCTCCAACTATAACCTCACCCAAAACAACCACGTGTCTCTTCAATTTGATCTATCCTCCTACTCTCAATCTTCTTCACTTGACGGTTTCCTCGATTTCCCAACTAATTCCACCAAAAATGACTTTCCCATCTTCCAATTTGAGTCCAAGCCCCCGAAATCCCAACCCGAAACATCAGCGTTGGAATTCACGTTTCCAACCACATCGGAGCGCAAGAAACCTCAATCCAGCCGAAAGCCCTCGCTGCAAATCTCCCTCCCTAAGAAGACAGAGTGGATCCAATTCGGAGAAGCGGAAACGAGTAATCCAAACGCGGAAGAGAAGAAGCACTACAGAGGAGTCCGGCAGAGACCGTGGGGAAAGTTCGCCGCGGAGATCCGAGACCCCAACAAGCGCGGCTCTAGGCTTGTTTGCCTGCTGGGGTACCGACGTCAACCGAATTTTCACCCTCCCGCCCCTCTCGCCGTTATCTCCCCACCCGCCCTTCGGTTATCCACAGCTTATGGTTGTCTGAACTGTCAAATTTAA 621 0.4944 SLLMANPIEISALNSIKLHLLGELSPLSFSSSSNYNLTQNNHVSLQFDLSSYSQSSSLDGFLDFPTNSTKNDFPIFQFESKPPKSQPETSALEFTFPTTSERKKPQSSRKPSLQISLPKKTEWIQFGEAETSNPNAEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRLVCLLGYRRQPNFHPPAPLAVISPPALRLSTAYGCLNCQI 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01137 206 SUPERFAMILY DNA-binding domain 141 167 IPR016177 GO:0003677
Pste1g01137 206 Gene3D AP2/ERF domain 140 176 IPR036955 GO:0003700|GO:0006355
Pste1g01137 206 PANTHER DNA-BINDING DOMAIN 100 167 IPR044808 GO:0003700|GO:0009873
Pste1g01137 206 MobiDBLite consensus disorder prediction 79 114 - -
Pste1g01137 206 Pfam AP2 domain 141 166 IPR001471 GO:0003700|GO:0006355
Pste1g01137 206 ProSiteProfiles AP2/ERF domain profile. 141 167 IPR001471 GO:0003700|GO:0006355
Pste1g01137 206 SMART rav1_2 141 186 IPR001471 GO:0003700|GO:0006355
Pste1g01137 206 MobiDBLite consensus disorder prediction 82 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01137 Pste-Chr1 3661612 3662468 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01137 4 167 AP2-EREBP Transcription Factor Family AT4G17490 42.775 1.57e-31 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pste1g01137 AP2 8.7e-05 CL0081