Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01119 GAAAAAGTTAGGGTTGCGTGTGACTGCTGAGAAGAGAAGAAGTTGAAGAAGAAGCAGAGCCATGGCGGTGGGAAAGAACAAGAGAATTTCCAAGGGAAAGAAGGGTGGCAAGAAGAAAGCCGCCGATCCCTTTGCCAAGAAGGATTGGTACGATGTGAAGGCCCCTTCTGTGTTCCAGGTCAAGAATGTTGGCAAAACCCTCGTCACTCGTACCCAAGGCACAAAGATTGCTTCTGAAGGACTCAAACATCGAGTGTTTGAAGTCTCATTGGCTGATCTTCAAGGGGATGAGGACCATGCCTTCAAGAAGATTCGTTTGAGAGCTGAGGATGTGCAAGGGAGGAATGTTCTCACAAACTTTTGGGGAATGGATTTCACAACTGACAAGTTGAGGTCCTTGGTGCGAAAATGGCAAACTTTAATTGAAGCCCATGTTGATGTGAAGACCACTGATAACTATACTTTGAGGATGTTCTGCATTGGCTTTACTAAGAGGCGTAGTAACCAGGTGAAGAGGACCTGTTATGCACAATCCAGCCAAATCAGACAGATTCGCAGGAAGATGAGAGAGATAATGGTTAACCAGGCAACATCCTGTGATTTGAAAGAATTGGTGCGCAAGTTCATTCCTGAAATGATTGGAAAGGAGATTGAGAAGGCAACATCTAGCATCTATCCTCTACAGAACGTTTTCATTCGCAAAGTGAAGATCCTGAAAGCTCCAAAGTTTGATCTTGGAAAATTGATGGAGGTCCATGGCGATTACTCAGAAGATGTTGGTACAAAGGTGGATAGACCTGCTGATGAAACCATGGCTGAGGGAGTGACTGAAGTAGTTGGAGCTTGATCTAGCTCATGCATTTTTGTTTGTTTAGAGTTTCTGTTGCTTTTACAAATATTTATTTCAGTGTTTTGACATTTAGAAACACTTGTTTTTTAAATCTAATCTGGATTTTGTTTCGGCTTGGCTATTGGTACAACCCAATAGCTACTAAGCTCGCATGGTTTATTAAGATTTTGAATTTTTTGAAGTAATACAGATGGTATAACGGGTTTCAGTTTGTTATTATACACTATCAGGTAGTTTTGGTAAAAAAATCGAGATTCCCAGTATTTACACTA 1122 0.4144 MAVGKNKRISKGKKGGKKKAADPFAKKDWYDVKAPSVFQVKNVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQGDEDHAFKKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMVNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGTKVDRPADETMAEGVTEVVGA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01119 261 MobiDBLite consensus disorder prediction 1 15 - -
Pste1g01119 261 MobiDBLite consensus disorder prediction 1 20 - -
Pste1g01119 261 Pfam Ribosomal S3Ae family 16 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Pste1g01119 261 Hamap 40S ribosomal protein S1 [RPS3A]. 1 258 IPR027500 GO:0003735|GO:0005840|GO:0006412
Pste1g01119 261 SMART Ribosomal_S3Ae_2 15 221 IPR001593 GO:0003735|GO:0005840|GO:0006412
Pste1g01119 261 ProSitePatterns Ribosomal protein S3Ae signature. 61 73 IPR018281 GO:0003735|GO:0005840|GO:0006412
Pste1g01119 261 PANTHER 40S RIBOSOMAL PROTEIN S3A 1 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01119 Pste-Chr1 3610084 3612643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01119 1 261 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 86.641 2.43e-164 454