Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01112 ATGAAGCTTAGCCCAGAGGAATTGGCAGAGCAAGAAAGGGACAGAGTGTATGGACTACCTGGGCAGCCTCCGGTGAAGTTCAAACAATACGCAGGTTATATCACAGTCAACCAAACTCACGGTAGAGCATTGTTTTATTGGTTCTTTCAGGCCACTCACAAACCAGATCAAAAACCTCTTCTCTTATGGCTCAATGGAGGTCCTGGTTGTTCCTCGATTGGTTATGGAGAAGCAGAGGAGTTAGGACCTTTCTTTCCGCAGGATAGCAGTCAACCAAAGCTAAGGTTGAATCCTTATTCTTGGAATAAAGCTGCCAATCTTTTATTTTTGGAATCCCCTGTTGGAGTGGGATTCTCCTACACCAACACCAGCAATGATATAAGTGAGCTTGGTGACACTGTTACTGCTAAAGATTCACATATATTTATCATCAAGTGGTTTAGAAGATTTCCACAATTCAGATCACACAAGTTCTACATTGCAGGTGAAAGCTATGCAGGACACTATGTTCCACAACTTTCTGAGCTCATTTTCGATAATAATCGCAATCCTGCTAAAAAGGATTACATTAACTTCAAAGGATTCTTGATTGGAAATGCATTATTAGATGACGAAACAGATCAAAAGGGTATGATAGATTATGCGTGGGATCATGCTGTGATATCTGATGGATTATACCATAACATTACAACCACATGCAATTTTACCCATCCAATTGAAAATCAAACAGCTGAATGCAATGTGGAACTGAATAAGTACTTCAATGTATACAGTATTATTGACATGTATAGCTTGTACACTCCTAGGTGTTTCAGCAACAATAGCAACACCAGAAAGGAAACCCCTCGAACTTTTTCCAAAATTGATCTGTGGCATAGAAAACCAGCTGGGTATGATCCCTGTGCATCCGATTATAGTGAAGTTTACCTAAATAGACCAGAAGTCCAAAAGGCATTGCATGCTAATGTCACCAAAATTCCCTATCCATGGACTCATTGCAGCAATAGTATCGAATTTTGGAATGACTCACCGCAGTCCATGCTTCCTGTCATCAAGAAGCTTATTGAAGGTGGTATTCGTATTTGGATTTACAGTGGAGATACTGATGGCAGAATTCCCGTGACATCAACAAGATACACTCTAAGAAAGTTAGGGCTTGAGATTGTTGAAGATTGGACTCCGTGGTATACTAGTCACCAGGTGGGAGGATGGACCATTGTTTACGATGGGCTTACTTTTGTTACCATAAGAGGCGCTGGGCATGAAGTTCCTACTTTCACTCCCAAGCAAGCTTTGCAGTTGGTTGGACACTTCCTAGAAAACAAGAAATTGCCATCTCAACCAATTTAA 1350 0.4081 MKLSPEELAEQERDRVYGLPGQPPVKFKQYAGYITVNQTHGRALFYWFFQATHKPDQKPLLLWLNGGPGCSSIGYGEAEELGPFFPQDSSQPKLRLNPYSWNKAANLLFLESPVGVGFSYTNTSNDISELGDTVTAKDSHIFIIKWFRRFPQFRSHKFYIAGESYAGHYVPQLSELIFDNNRNPAKKDYINFKGFLIGNALLDDETDQKGMIDYAWDHAVISDGLYHNITTTCNFTHPIENQTAECNVELNKYFNVYSIIDMYSLYTPRCFSNNSNTRKETPRTFSKIDLWHRKPAGYDPCASDYSEVYLNRPEVQKALHANVTKIPYPWTHCSNSIEFWNDSPQSMLPVIKKLIEGGIRIWIYSGDTDGRIPVTSTRYTLRKLGLEIVEDWTPWYTSHQVGGWTIVYDGLTFVTIRGAGHEVPTFTPKQALQLVGHFLENKKLPSQPI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01112 449 ProSitePatterns Serine carboxypeptidases, serine active site. 160 167 IPR018202 GO:0004185
Pste1g01112 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 110 120 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 411 424 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 97 109 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 171 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 FunFam Carboxypeptidase 297 444 - -
Pste1g01112 449 ProSitePatterns Serine carboxypeptidases, histidine active site. 411 428 IPR033124 GO:0004185
Pste1g01112 449 Gene3D - 347 440 - -
Pste1g01112 449 FunFam Carboxypeptidase 347 441 - -
Pste1g01112 449 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 16 428 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 Gene3D - 301 337 - -
Pste1g01112 449 FunFam Carboxypeptidase 10 272 - -
Pste1g01112 449 Pfam Serine carboxypeptidase 20 441 IPR001563 GO:0004185|GO:0006508
Pste1g01112 449 Gene3D alpha/beta hydrolase 10 272 IPR029058 -
Pste1g01112 449 SUPERFAMILY alpha/beta-Hydrolases 11 444 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01112 Pste-Chr1 3572897 3586328 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01112 306 444 Calmodulin-binding Proteins AT2G22960 28.571 3.54e-14 68.9