Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01079 TCGCCGGCTCAACCTCTGCGTTTGTGATTCAACTTCTCTCTCGAAGCATTGTTGTGTTTCTGTAACTCCAATATTCTGCTTCTACTTTCGTCTGTTTTACATTTGGATTATTCACAGATTCACCTAACACCCCTTCTTTTGAATCCCTTTCTTTTCGATCAAAGCCTCCATTCCCATTTCCCTCTGTTCTACATACAATTCTCTCTTCTGACAAAACTGTTGATTGTACTTGATTCTTTTTCGTCTATTCATTTGGGAACCACCGGAAGCACGATGGGAGATGTGGCAAAGGACCTGACAGCTGGGACTATTGGAGGGGCAGCACAATTGATAGTTGGACACCCATTTGACACCATTAAGGTCAAGCTCCAAAGCCAGCCTACACCACTCCCAGGCCAACTTCCCAAGTATTCTGGTGCAATTGATGCTGTCAAGCAGACGGTGGCAGCTGAAGGTCCAAGGGGCTTATACAAGGGTATGGGAGCCCCACTTGCCACAGTGGCCGCCTTCAATGCAGTCCTGTTTACAGTTAGGGGGCAAATGGAAGCCTTGTTGAGGTCACATCCCGGTGCTACCCTAACAATAAATCAGCAGGTTGTATGTGGAGCTGGAGCTGGACTTGCTGTTTCCTTTCTAGCTTGCCCTACTGAATTGATCAAATGCAGATTGCAAGCACAAAGTGCGCTAGCTGGCTCTGGAATAGATGCAGTGGCAGTGAAATATGGGGGACCCATGGATGTTGCCAGGCAAGTTCTCAGGTCAGAAGGAGGCACAAAAGGTCTTTTCAAGGGCCTGGTTCCCACTATGGCACGTGAAGTACCGGGCAATGCTGCAATGTTTGGTGTATATGAAGCATTAAAGCGATTACTTGCAGGTGGCACAGATACTTCGGAACTGGGTAGAGGTTCTCTGATACTTGCTGGAGGCTTGGCTGGAGCTACCTTCTGGGTCTCAGTTTACCCAGCTGATGTTGTTAAGAGTGTGATTCAAATAGATGATTTCAAAAACCCAAAGTTCTCTGGTTCACTTGATGCTTTCAGAAGAATTTCTGCTTCTGAGGGTATCAAGGGTCTTTATAAGGGTTTTGGTCCTGCAATGGCCCGAAGTGTTCCTGCCAATGCTGCTTGCTTCTTGGCATATGAGATGACAAGATCGGCTCTAGGATGATTAATTCATTCGTCAGGTCGATAAGAGGGGTGCCATTGAGTGCCA 1212 0.4703 MGDVAKDLTAGTIGGAAQLIVGHPFDTIKVKLQSQPTPLPGQLPKYSGAIDAVKQTVAAEGPRGLYKGMGAPLATVAAFNAVLFTVRGQMEALLRSHPGATLTINQQVVCGAGAGLAVSFLACPTELIKCRLQAQSALAGSGIDAVAVKYGGPMDVARQVLRSEGGTKGLFKGLVPTMAREVPGNAAMFGVYEALKRLLAGGTDTSELGRGSLILAGGLAGATFWVSVYPADVVKSVIQIDDFKNPKFSGSLDAFRRISASEGIKGLYKGFGPAMARSVPANAACFLAYEMTRSALG 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Pste1g01079 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Pste1g01079 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Pste1g01079 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Pste1g01079 297 Gene3D Mitochondrial carrier domain 99 297 IPR023395 -
Pste1g01079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Pste1g01079 297 Gene3D Mitochondrial carrier domain 2 98 IPR023395 -
Pste1g01079 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Pste1g01079 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 4 296 - -
Pste1g01079 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Pste1g01079 297 FunFam mitochondrial carnitine/acylcarnitine carrier-like protein 2 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01079 Pste-Chr1 3486788 3491028 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01079 22 291 Antiporters AT1G79900 33.213 1.10e-39 139
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01079 1 3486788 3491028 Pste1g01079 1 3486788 3491028 ECH