Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01078 ATGTTATTTCATGCACCTTTACCGGACCTTGTTCTTCTTTACTCTACATCAAATGCAATGTCTTTACATATCTTTTTGCCTTGCATTCTTGCTCTAGTTTCACTTCCACATTTGAATAGCTTAAAGGCCATAGAAATAGAACTAAATACAAGCATAACTACCGGATCAAATTCTACCTGGAAGTCACCCTCAGGTGATTTTGAATTTGGATTCTACACTCTTCCTAGTGGTCTCTTTCTTGTCGGAATATGGTATGGAAGAATCCTAGAGAGAACACTAGTATGGTACCGGAGTCCCAGTGTTGAACCAAATTCCCAAATCCAATTCACTTCTGCAGGACAACTTGTGGTAGCATACCCAAATGGAACTATAGCTCACACAATATACAGTGGAGGAAACGGAGGTGCAGCAACTTCTGCCCACATGCAAGATGATGGCAACTTTGTCATGAAGGACTCCAACTTAAGACCTGTCTGGGAGAGTTTCAACTCTCCAGCCAACACAATCTTACCTGGCCAAACCTTGCAGAACACTCAAATCATATATTCCAAGGGGAAAGGAGATTCAGACTACTCATTGGGAAATCACATGTTACAAATGCAAAGGGATGGTAACTTGTTGCTCAAAGCTTCCCAATGGTCTGACCCTGCATACTGGTACACTTCAACCTTGACCCCCAATGTGAGTTTGGTGTTTAATGCTACCACTGCTCTCATGTTCCTAGTCAGTGGGACTAGGAACATCTACTCCTTAAACAAAAACACTCCAATCCCAGTGAAGGGTTACTATCACCGTGCTACAATAGATGAAAGTGGCAATTTCAATCAATATGCATATCACAAAAGGAATGGCACCAGTTGGAGGAGGGTTTGGAGAGCTGTGGATGATCCCTGCAGAGTGAATGCTGTTTGTGGTGTGTATGGCTTGTGCACTTCTCCTGACAATGAAGCAATCAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATCATAAAGATGTGTCTAAAGGGTGTCACCCACCTGTTGTCATCAATAATTACTGTGAAGAGATCAACTTCAAGTTGCTGGTCTTTGAAGACACTGATTTCCAATTTGATAGTAATTTTTTTCACATCACTAATGTTGATTTGGAAAGTTGTAAGAAGGCTGTAATGGATGATTGTAATATTGTTGCTGCAACTTACGATGCTTCCACCTCCACATGTGCCAAAAAGAGGCTGCCCTTGCTGAATGCTAGAAATAGCTCTTCTTCTAAGGGACAGATAGCACTGCTTAAAGTTCCTAACAATGTTGGGCCTTGGATATCTAAAATCCCCAAGAAGAAGAGTTTTAATGTAAGAATCTTTTTGAAGGCTATGCTTGCAGTTACTGCAACTCTTGCTGGTTTCTTTGGTGCCCTTGCTGTCTACCATCATCCCTTCACTAGGAGACTAACAAGAAGAAAGTATCTGAATGCAACTGCTATTGTAATCAACTTCAGAGAATTCACCTTCCAGGAGCTGCATGAAGCAACAGATGGATTCACTAGGATGCTTGGTGAGGGTTCTTCATGCAAAGTGTACAGTGGTGCTTTAATAATAGATGATGCAGAGATTGGTATTGCAGTAAAGAAACTGAAAAAGAAAATTGAGAAAAGTGATTGTGAATTCATGACTGAGCTCAAAATTATTGGTCGTACCCATCACAGAAATTTGTTGAGGCTTTTGGGCTTTTGCATTGGGAGTAGCCATAGAATGCTTGTGTATGAGCTTATGCCAAATGGAACACTGTCCAGTTTTTTGTTTGGAGAAGGAGAAAGGCCTCAATGGGCTCATAGGTTTGAGATAGCTCTTGGAGTAGCGAGAGGCTTACTATACTTGCATGAAGAGTGCCACACCCAAATCATGCATTGTGATATTAAGCTCCAAAATGTGTTACTTGATGCCAATCACTCAGCAAAGATTGCAGATTTTGGGCTCTCCAAGCTTTTGAACAAGGATCAAACTAGTACAAGCACTAATTTACGAGGGACCTTGGGGTATATGGCACCTGAATGGCTAAGGAGTGCACCAAAAACTGCCAAAGTTGACATATACAGTTTTGGGGTCATGTTGTTGGAGATTATTTGCTGCAGAAGGAACATTGAATCTCGTCAAGATGAAAAAGACCACGAAGATGATGATTTGGTTCTTTCAAACTGGGTTTTAAGGTGCATAGTTTCTAGGAAGCTAGAGGTAGTGGTGAGACATGACTTAGAAGTACTCAATAATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTTTGGTGTGTTCATCCAAATCCAGCTCTTAGACCTTCAATGAAGCAGGTGGTGCAAATGCTAGATGGAACTGTGGAAGTTGAGGTTCCTCCTCTAGTTTATGATCGGATGATGGCCAATCAGGGCTTATAG 2415 0.4145 MLFHAPLPDLVLLYSTSNAMSLHIFLPCILALVSLPHLNSLKAIEIELNTSITTGSNSTWKSPSGDFEFGFYTLPSGLFLVGIWYGRILERTLVWYRSPSVEPNSQIQFTSAGQLVVAYPNGTIAHTIYSGGNGGAATSAHMQDDGNFVMKDSNLRPVWESFNSPANTILPGQTLQNTQIIYSKGKGDSDYSLGNHMLQMQRDGNLLLKASQWSDPAYWYTSTLTPNVSLVFNATTALMFLVSGTRNIYSLNKNTPIPVKGYYHRATIDESGNFNQYAYHKRNGTSWRRVWRAVDDPCRVNAVCGVYGLCTSPDNEAIKCECIPGYIPLDHKDVSKGCHPPVVINNYCEEINFKLLVFEDTDFQFDSNFFHITNVDLESCKKAVMDDCNIVAATYDASTSTCAKKRLPLLNARNSSSSKGQIALLKVPNNVGPWISKIPKKKSFNVRIFLKAMLAVTATLAGFFGALAVYHHPFTRRLTRRKYLNATAIVINFREFTFQELHEATDGFTRMLGEGSSCKVYSGALIIDDAEIGIAVKKLKKKIEKSDCEFMTELKIIGRTHHRNLLRLLGFCIGSSHRMLVYELMPNGTLSSFLFGEGERPQWAHRFEIALGVARGLLYLHEECHTQIMHCDIKLQNVLLDANHSAKIADFGLSKLLNKDQTSTSTNLRGTLGYMAPEWLRSAPKTAKVDIYSFGVMLLEIICCRRNIESRQDEKDHEDDDLVLSNWVLRCIVSRKLEVVVRHDLEVLNNFKRFEEMALVGLWCVHPNPALRPSMKQVVQMLDGTVEVEVPPLVYDRMMANQGL 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01078 804 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 585 790 - -
Pste1g01078 804 ProSiteProfiles Protein kinase domain profile. 506 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01078 804 Gene3D - 41 164 IPR036426 -
Pste1g01078 804 SMART serkin_6 506 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01078 804 PIRSF SRK 15 802 IPR024171 GO:0004674
Pste1g01078 804 FunFam S-receptor-like serine/threonine-protein kinase 476 584 - -
Pste1g01078 804 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 52 792 - -
Pste1g01078 804 SUPERFAMILY Protein kinase-like (PK-like) 484 782 IPR011009 -
Pste1g01078 804 Gene3D Phosphorylase Kinase; domain 1 481 584 - -
Pste1g01078 804 Pfam D-mannose binding lectin 100 178 IPR001480 -
Pste1g01078 804 Gene3D - 165 304 - -
Pste1g01078 804 Pfam Protein kinase domain 510 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01078 804 ProSiteProfiles Bulb-type lectin domain profile. 45 163 IPR001480 -
Pste1g01078 804 Gene3D Transferase(Phosphotransferase) domain 1 585 796 - -
Pste1g01078 804 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 223 IPR036426 -
Pste1g01078 804 Pfam S-locus glycoprotein domain 262 328 IPR000858 GO:0048544
Pste1g01078 804 SMART blect_4 51 165 IPR001480 -
Pste1g01078 804 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01078 Pste-Chr1 3482198 3484612 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01078 452 791 Receptor kinase-like Gene Family AT5G03140 38.506 7.91e-65 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g01078 Pkinase 2.8e-47 CL0016