Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01071 AACGCCAAGTCAATAGAACTGGGGTCCAGTATCGTGGCTGGCACCAATTCATCTTGGCGTTCATCCTCTGGTGATTATGCCTTTGGCTTCTACCACCTTCTTAGTGGCCACTATCTTGTTGGAATTTGGTTTGATAAAATTCCAAACAGAACACTGGTTTGGTCTTTAGACCGTGACAAACCAGTTCAAGTTGGATCATCCATCAATCTCACACAAAGTGGCCAATTTGTGCTCCAACCTGTTAATGGATCCTCATTTACAATCTACAATGGAACAAACACAACCTCTGCAGTGATGCAAGATGATGGGAATTTCGTCTTGATGAATTCACTTTCAAACAGTACATGGAAGAGCTTTGATACACCAACAGATACTCTTCTGTTAGGCCAAGCCTTGAATATGGGTAAGAAGCTCTACTCCAATGCCAATGGATCTGTAGACTACTCAACAGGGCAATACAGTTTGGAGATCCAACAATCTGATGGCAACATTCTCCTAAAAGCTTATCAGTTTACAGATGCTGCTTATTGGTCAAGTGGAACTACCCAATACACAGATGTCAGAATTATTTTTAACAGCACAACAGGTTTTCTTTATGCTGTCAATGGCACAAACCAAATTATATACAACATGACCAATGATGTAACGGGTGCAATTGAAGATTATTATCAACGTGTTCTGATTGATGACCAAGGAAACTTTCAGAAGTTAATTTACCATAAAGTAAATGGAAGTAAGTGGACAACTGTGTGGAAAGCCATAGACGAGCCCTGCAGAGTGACTGCACTTTGTGGCGTGTATGGCTTTTGCAATTCATCATCTGACACCCAAACATACAGTTGTGAATGCTTGCCTGGCTATACACATTTTGATCCAAGTGTACCCTCCAAAGGGTGCTATCTCAATGAGGCCAATGACTTGTGTGCTGTAAATTCCTCTACTCCAGAATTTAAGGTGGAAGTGAAAGAAATTCAAGATGCTGATATACCAAACTATGATTATTTTTTTCTTGATCTACAAGTGATAAATAACATGAATTTGGAAAGCTGCAAGAAGGAACTGATGGAAGACTGTTTCTCCATGGCTGCTGTGTTAAATGGCAGTGATTGCCATAAGAAAAAGTGGCCAATTATAAATGCCCGAAGAATCATGGCTGACACTAGCAATCGTGTGATGCTTATTAAAGTTCCTCGGCTAGACAATGAGATGGAAACTGAAAAGGATTCACCATCTTTGGTTGTTTTGATAGTGGCTCTAATCTCTTGCTCACTACTTGCTGCATTGTTTGCAGCTACTGCCATTTATCATCTTCCCATTTGTCGGTATCTCATACACAAAGAGGCACCACCAAAGCCAAAGCCTGTGGATATCAATCTAAAGGTATTCTCGTTCCAACAGCTGAGAGAAGCAACAAATGGATTCAAGGATGTACTTGGTCGAGGTGCCTATGGTACAGTGTATAGTGGGATTTTAATCATGGAGGGTCAACAGGTTGAGGTTGCTGTCAAACAACTGGCACAAGTGGAAGACCAAGGCGAGAAAGAATTTGTTACAGAAGTTCAAGTTATTGCTCTCACTTATCATAGAAATCTTGTTGGGTTATTGGGGTTTTGCAATGAGCAGAAACATAGACTTCTGGTTTATGAGAAAATGGAAAATGGGACACTATCTGACTACCTTTTTGGAGAAGGGTGCAAACCCAAGTGGGAGAGTAGAGTCAGAATTGTGCTTGAAATTGCAAGAGGCTTATTATATTTGCATGAGGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCTCAGAATGTTCTTCTTGACTCTAGTTACACTGCAAAGATTTCAGATTTTGGGCTAGCAAAGCTGTTAATGAAAGACAAAACTCGAACAAACACGAATGCTAGAGGGACAATGGGATATATGGCACCAGAATGGCTAAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGGGTGCTGTTGTTGGAAATCATATTTTGCAGAAGGCACATCAAGTTGCATCAAGTTGAGGATGGAACAGGTGAAGATGACATGATACTCATAGATTGGGTTCTACATTTGGCCCAACAAAACAACTTAAGAACCGCAGTGATTGATGATCTTGAAGTTGAAAGTGATTTCAAGAGGTTCGAAAGAATTGCAATGGTTGGATTATGGTGCATAAATCCCAACCCAACTCTTAGACCATCTATCAAAATGGTGGTACAGATGTTGGAAGGAAATTTAGAAGTGGCAATGTCTTTGGGTATCTGTCTGCCTTGCATTCTTGCACTACTTTCACTTCCAAATTTGAATGGAATACATGCCATAGAAATAAAACCAAACACAAACATCACTGCCGGATCAAATTCTACCTGGAAGTCACCCTTAGGTGATTTTGAATTTGGATTCCATGAGCTTCCCAATGGTCTCTTTCTTGTGGGAATATGGTTTGGAAGAATCAAAGGGAGAACACTGGTATGGTACCACGGTCCCCCTGTGGGACAAAATTACAAAATCCAATTCACTTCTGCAGGACAACTTATAGTAGCAAACCCAGATGGAACTACTGCTCAAAACATATTCATTACAGGAAACGGTGATGCTGCTGCTGCAACTTCTGCCTACATGCAAGATGATGGCAATTTTGTGATAATGGACTCCAACTTAAGTCATGTGTGGCAGAGTTTCAACTCTCCAACCAACACAATCTTACCTGGCCAAACCTTACAGAGTAACCAAATCCTCTATTCTAAGGGAAAAGGACTTTCAAACTACTCAACTGGAAATTTTATGCTACATATGCTAGAAAATGGCAACTTGGATCTTAGATCTTACCTATGGTCAGGCCCTGCTTATTGGTACATTTCAACCTCGACCCTCAACGTGAGTTTGGTGTTTAATGCTACCACTGCTCTCATGCACCTAGTCAGCGGCACTAGGATTACCTACTCCTTAAGCAACAACACTCCAACCCCAGTGAAGGATTACTATCATCGTGCTACAATTGATGAGAATGGCAATTTCCAGCAGTATGCATATCACAAAAGGAATGGCACTGAGTGGAGGAGGGTTTGGAGGGCTGTGGAGGATCCATGTAGAGTGAATGCTATTTGTGGTGTTTATGGCTTGTGCACTTCTCCTGACAATGAATTAGTCAAGTGTGAGTGTATTCCAGGTTATATCCCATTGGATCATCAAGATGTGTCCAAAGGGTGTCAACCACCGTCTGTCTTCAATTACTGTGAAAAAACCAGCTTCAAGCTGCAGGTCTTTGAAGACACTGATTTCCAATTTGATACTAATTTTGCTCGCATCACTAAAGTTGATTTGGAAGGTTGTAAGAAGGCTGTAATGAATGATTGTAATATTGTTGCTGCAACTTACGATGCTTCCACCTCCACATGTGCCAAAAAGAGGCTGCCCTTGCTGAATGCTAGAAATAGCTCTTCTTCTAACGGACAGATAGCACTACTCAAATTTGCTAATGATGTTGAGTCTAAAATACCCAAGAAGAAGAATAGTTTTAATGTAAGGATCTTTTTGAAGGTTATGCTTGCAGTTACTGCAACTCTTGCTGGTTTCTTTGGTGCCCTTGCTGTCTACTATCATCCTTTCACTCAAAGACTAACAAGAAGAAAGAAGTATCTGAGTGCAACTTCAATTGGAATCAACTTCAGAAAATTCACGTTGCAGGAGCTGCATGAAGCAACAGATGGATTCGCTAGGATGCTTGGTAAGGGATCTTCAGGCAAAGTGTACCATGGTGCTTTAATAATAGATGATGCAGAGATCGGTATTGCAGTAAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAAAGTGAATTCATGACAGAGCTGAAAATTATAGGCCGCACTCATCACAGAAATTTGGAGAGGCTTTTGGGGTTTTGCATTGAGAGTAGCCATAGAATTCTTGTGTATGAGCTGCTGCCAAATGGAGCACTGTCCAGTTTTTTGTTTGGAGGGGAAGAAAGGCCTGAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTAGCAAGAGGCTTACGATACTTGCATGAAGAGTGCCACACCCAAATCATACATTGTGATATCAAGCCTCAAAATGTGTTACTTGATGCTAATTACACAGCAAAGATTGCAGATTTTGGGCTTTCCAAGCTTTTGAGCAAAGATCAAACTAGAACAAGCACCAATTTAAGAGGGACAATTGGGTATATGGCACCAGAATGGCTAAGGAGTGCACCAATAACAGCCAAAGTTGATATATACAGTTTTGGGGTCATGCTATTGGAGATTATTTGCTGCAGGAAGCACATGGAGTCTTGTCAGGATGTAGAAGACAGCGAAGATGATGATTTGGTTCTTTCAAATTTGGTTTTAAGGTGTGTGGTGTCTAAGAAACTAGAGCTACTGGTGAGACATGACTCAGAAGTGCTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTATGGTGTGTTCATCCAAATCCAGCTCTTCGGCCTTCCATGAAGGTGGTGATGCAAATGCTAGATGGAGCTGTGGAAGTTGGTGTTCCTCCTTTGGTTTATGATATGATGATGGCAAATGAGAGCTTA 4620 0.4104 NAKSIELGSSIVAGTNSSWRSSSGDYAFGFYHLLSGHYLVGIWFDKIPNRTLVWSLDRDKPVQVGSSINLTQSGQFVLQPVNGSSFTIYNGTNTTSAVMQDDGNFVLMNSLSNSTWKSFDTPTDTLLLGQALNMGKKLYSNANGSVDYSTGQYSLEIQQSDGNILLKAYQFTDAAYWSSGTTQYTDVRIIFNSTTGFLYAVNGTNQIIYNMTNDVTGAIEDYYQRVLIDDQGNFQKLIYHKVNGSKWTTVWKAIDEPCRVTALCGVYGFCNSSSDTQTYSCECLPGYTHFDPSVPSKGCYLNEANDLCAVNSSTPEFKVEVKEIQDADIPNYDYFFLDLQVINNMNLESCKKELMEDCFSMAAVLNGSDCHKKKWPIINARRIMADTSNRVMLIKVPRLDNEMETEKDSPSLVVLIVALISCSLLAALFAATAIYHLPICRYLIHKEAPPKPKPVDINLKVFSFQQLREATNGFKDVLGRGAYGTVYSGILIMEGQQVEVAVKQLAQVEDQGEKEFVTEVQVIALTYHRNLVGLLGFCNEQKHRLLVYEKMENGTLSDYLFGEGCKPKWESRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTMGYMAPEWLKNAPVTTKVDIYSFGVLLLEIIFCRRHIKLHQVEDGTGEDDMILIDWVLHLAQQNNLRTAVIDDLEVESDFKRFERIAMVGLWCINPNPTLRPSIKMVVQMLEGNLEVAMSLGICLPCILALLSLPNLNGIHAIEIKPNTNITAGSNSTWKSPLGDFEFGFHELPNGLFLVGIWFGRIKGRTLVWYHGPPVGQNYKIQFTSAGQLIVANPDGTTAQNIFITGNGDAAAATSAYMQDDGNFVIMDSNLSHVWQSFNSPTNTILPGQTLQSNQILYSKGKGLSNYSTGNFMLHMLENGNLDLRSYLWSGPAYWYISTSTLNVSLVFNATTALMHLVSGTRITYSLSNNTPTPVKDYYHRATIDENGNFQQYAYHKRNGTEWRRVWRAVEDPCRVNAICGVYGLCTSPDNELVKCECIPGYIPLDHQDVSKGCQPPSVFNYCEKTSFKLQVFEDTDFQFDTNFARITKVDLEGCKKAVMNDCNIVAATYDASTSTCAKKRLPLLNARNSSSSNGQIALLKFANDVESKIPKKKNSFNVRIFLKVMLAVTATLAGFFGALAVYYHPFTQRLTRRKKYLSATSIGINFRKFTLQELHEATDGFARMLGKGSSGKVYHGALIIDDAEIGIAVKKLEKKIEKSESEFMTELKIIGRTHHRNLERLLGFCIESSHRILVYELLPNGALSSFLFGGEERPEWGQRIEMALGVARGLRYLHEECHTQIIHCDIKPQNVLLDANYTAKIADFGLSKLLSKDQTRTSTNLRGTIGYMAPEWLRSAPITAKVDIYSFGVMLLEIICCRKHMESCQDVEDSEDDDLVLSNLVLRCVVSKKLELLVRHDSEVLNDFKRFEEMALVGLWCVHPNPALRPSMKVVMQMLDGAVEVGVPPLVYDMMMANESL 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01071 1540 SUPERFAMILY alpha-D-mannose-specific plant lectins 815 961 IPR036426 -
Pste1g01071 1540 FunFam S-receptor-like serine/threonine-protein kinase 1211 1320 - -
Pste1g01071 1540 ProSiteProfiles Bulb-type lectin domain profile. 1 120 IPR001480 -
Pste1g01071 1540 ProSitePatterns Protein kinases ATP-binding region signature. 1248 1274 IPR017441 GO:0005524
Pste1g01071 1540 ProSiteProfiles Bulb-type lectin domain profile. 781 901 IPR001480 -
Pste1g01071 1540 ProSiteProfiles EGF-like domain profile. 254 293 IPR000742 -
Pste1g01071 1540 Gene3D - 904 1032 IPR036426 -
Pste1g01071 1540 SMART blect_4 10 122 IPR001480 -
Pste1g01071 1540 SMART blect_4 787 903 IPR001480 -
Pste1g01071 1540 SUPERFAMILY Protein kinase-like (PK-like) 1218 1518 IPR011009 -
Pste1g01071 1540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Pste1g01071 1540 SMART egf_5 1035 1077 IPR000742 -
Pste1g01071 1540 SMART egf_5 257 300 IPR000742 -
Pste1g01071 1540 Pfam Protein kinase domain 1246 1516 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 Pfam Protein kinase domain 476 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 SUPERFAMILY Protein kinase-like (PK-like) 454 749 IPR011009 -
Pste1g01071 1540 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 14 755 - -
Pste1g01071 1540 CDD STKc_IRAK 478 750 - -
Pste1g01071 1540 SUPERFAMILY alpha-D-mannose-specific plant lectins 38 181 IPR036426 -
Pste1g01071 1540 ProSitePatterns Protein kinases ATP-binding region signature. 478 503 IPR017441 GO:0005524
Pste1g01071 1540 FunFam S-receptor-like serine/threonine-protein kinase 444 550 - -
Pste1g01071 1540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1364 1376 IPR008271 GO:0004672|GO:0006468
Pste1g01071 1540 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1321 1526 - -
Pste1g01071 1540 Gene3D Phosphorylase Kinase; domain 1 1217 1320 - -
Pste1g01071 1540 Gene3D Phosphorylase Kinase; domain 1 447 549 - -
Pste1g01071 1540 Gene3D Transferase(Phosphotransferase) domain 1 551 757 - -
Pste1g01071 1540 Gene3D Transferase(Phosphotransferase) domain 1 1321 1524 - -
Pste1g01071 1540 ProSiteProfiles Protein kinase domain profile. 472 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 SMART serkin_6 472 748 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 SMART serkin_6 1242 1522 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 Pfam S-locus glycoprotein domain 220 288 IPR000858 GO:0048544
Pste1g01071 1540 Pfam S-locus glycoprotein domain 998 1066 IPR000858 GO:0048544
Pste1g01071 1540 ProSiteProfiles Protein kinase domain profile. 1242 1530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01071 1540 Pfam D-mannose binding lectin 838 917 IPR001480 -
Pste1g01071 1540 Pfam D-mannose binding lectin 51 137 IPR001480 -
Pste1g01071 1540 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 551 756 - -
Pste1g01071 1540 Gene3D - 117 217 IPR036426 -
Pste1g01071 1540 Gene3D - 778 902 IPR036426 -
Pste1g01071 1540 Gene3D - 2 116 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01071 Pste-Chr1 3455999 3462215 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01071 458 751 Receptor kinase-like Gene Family AT1G60800 41.528 1.36e-63 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g01071 Pkinase 2.6e-46 CL0016