Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01069 CCCATACTAGCAGTGGTGCCGCTATAAAATATTCAACTCATGAAGAAACCCTAGCTCTCAGTTGGCGCGGGTGAGGTAGAACCTTTCCACTGTGGTGACTGCGCGATGGGTGCCTACAAGTATGTTTCAGAGCTATGGCGCAAGAAGCAGTCAGATGTCATGCGCTTCTTGCAGCGGGTGAGGTGTTGGGAGTACAGGCAGCAACCTTCCATTGTTCGTTTGAGTAGGCCTACCCGCCCTGACAAGGCTCGTCGCTTGGGCTATAAGGCTAAGCAAGGTTATGTCGTTTACCGCGTTCGTGTTCGGAGGGGTGGCAGAAAGAGACCAGTTCCCAAAGGTATTGTTTATGGGAAGCCAACAAACCAGGGTGTTACTCAACTGAAATTTCAACGAAGCAAGAGGTCAGTTGCCGAGGAGCGAGCTGGACGAAAGCTGGGTGGACTTAGGGTTCTCAACTCTTACTGGGTGAATGAGGACTCGACTTATAAATACTTTGAGATAATTCTGGTGGATGTTGCTCATTCTGCTATTAGAAATGATCCCAGAATCAATTGGCTCTGCAATCCAGTGCATAAGCACAGGGAGCTGCGTGGGCTCACCTCTGCTGGTAAAAGCAACAGGGGTTTGCGAGGCAGAGGACATCTGTACCACAAAGCACGCCCATCTCGCAGAGCAACATGGAAGAGAAACAACACCCTGTCTCTTCGCCGCTACCGTTAATACTTTTGTTATCTTATTTTTGCTTTATTTTTCTGAATACTATTTTCAGGACATAAGATTTGTTGCATGTTTTTATTAACTTTGGAATGAGTTTTGAACACTTAAATCATATCTTTTTCGATAAATTGAGCAGTTTTTCTACTGTTAAGTTTGAATTTGTTATTTATATTTAGTTATCTG 900 0.45 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLSRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHSAIRNDPRINWLCNPVHKHRELRGLTSAGKSNRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01069 204 FunFam Ribosomal protein L15 1 204 - -
Pste1g01069 204 PANTHER RIBOSOMAL PROTEIN L15 1 204 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pste1g01069 204 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 1 195 IPR012678 GO:0003735|GO:0005840|GO:0006412
Pste1g01069 204 Gene3D Ribosomal protein l15e 1 204 IPR024794 GO:0003735|GO:0005840
Pste1g01069 204 SMART Ribosomal_L15e_2 2 193 IPR000439 GO:0003735|GO:0005840|GO:0006412
Pste1g01069 204 ProSitePatterns Ribosomal protein L15e signature. 46 69 IPR020925 GO:0003735|GO:0005840|GO:0006412
Pste1g01069 204 Pfam Ribosomal L15 2 190 IPR000439 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01069 Pste-Chr1 3455702 3457854 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01069 1 204 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 91.667 4.08e-127 355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01069 1 3455702 3457854 Pste7g00515 7 4809731 4812301 PCT