Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01062 TTTTTATGGCTTTAATCTTTCCTACCAAAATGGCTAGCAAATTTCTTGTTCTCTATCTTGCCATCCATCTATGTTCCAATGTAGTAAGGACTGCTAATGCTAACTCAATTGAACTGGGGTCCAGCATTGTGGCTGGCACCAATTCATCTTGGTCATCACCCTCTGGAGATTATGCCTTTGGCTTCTACAACCTTCATAGTGGCCTTTATCTGGTTGGAATTTGGTTTGACAAAATTCCAAACAAAACACTGGTTTGGTCTGCAAACCGTGACAATCCAGTTGAAATTGGATCAACCATCAATCTCACAAGAAGAGGCCAACTTGTTCTACAACCTGTCAATGGGGACTCATTTCCAATCTACAAGGGAACAGACATAACCTCTGCGGCTATGCAGGATGATGGGAATTTTGTCTTGAGGAGTTCACTCTCCCATGTTATATGGGAGAGCTTTGACTCTCCCACGGATACTCTTCTATTAGGCCAAACTTTGAACATGGGTCAGAATCTCTACTCCAATGCCAATGGATCAGTAGACTATTCAAAAGGGCAATACAGTTTGGAGATCCTATCTGATGGCAACATTGTTCTTAAAGCTTATCGCTTCACCAATTCTGCCTATTGGTGGAGTGATACTGCCCACAACACAGGTGTGCAAATTATTTTTAACAGCACAACAGCTTTTCTTTATGTGGTCAATGGCACACACCAAATTATACGTAACATGGCAATTGAAGAAATAGGTAAGATAGAAGATTACTATCAGCGTGTGCTGGTTGATGACCAGGGAAACTTTCAGAAGTTGATTTACCATAAAGATAATGGAAGTGAGTGGAAATCTGTATGGAATGCCGTAACAAAGCCATGCTATGTGACTGTCCTTTGTGGGGTGTATGGCTTTTGTAATACATCTGATTCTGATCCACAAACATATAGTTGTGAATGCTTGCCTGGCTATACTCCTTTGGATCCAAGTGCACCCTCCAAAGGATGTTATCTCAGTCAAGTGAAGGACTTGTGTGCTGCAAATTCCTCTGCCAAAGATTTTAAGTTGGAAGTGAAATCAATTCAGGATGCTAATGTACCAAACGATGGTTATTTTTTTCTTGATCTACAAGTCATGGATAAGATGGATTTAGAAAGCTGCAAGAGGGAATTGATGAATGATTGTCTCTGCATGGCAGCCACTTTCAATGGTACTGCTTGCTATAAGAAGAAGTGGCCAATTATAAATGCTATAAGAATCATCCCTGACACTAGTAATCATGTGATGCTGATTAAAGTTCCTCTGGTTGACAATAACAAGGACAATGAAAAGGATTCTTCATCGTCATTGGTTATTTTGATAGTGCCTCTCATTACTTGCTCCTTACTTGCTGCATTTTTTGCGGCTACAGCCAGTTATCATCACCCCATTTGTCAGAATCTCTTACACAAAAGGGTGCCACCAAAGCCAAAGCCTATGGACATCAATCTCAAGGCCTTCTCATTCCAACAACTGAAAGAAGCAACAAATGGATTCAAGGACCAACTTGGTAGAGGTGCCTATAGTACAGTGTATGGTGGGATTTTAAGCTTGGAGGGTCAGCAGGTTGAGGTTGCTGTCAAACAACTGGAGAAAGTAGAAGACCAAGGTGAGAAAGAATTTGTTACAGAAGTTCAAGTTATTGCTCTCACTTATCATAGAAATCTTGTCGGGTTATTGGGGTTTTGCAATGAGCAGAAACATAGACTTCTGGTTTATGAGAAAATGGAAATTGGGACACTATCTAACTTCCTTTTTGGAGAAGGGGGCAAACCCAAGTGGGAGAGTAGAGTCAGAATTGTGCTAGAAATTGCAAGAGGCTTATTATATCTGCATGAGGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCTCAGAATGTTCTTCTTGACTCTAGTTACACTGCAAAGATTTCAGATTTTGGGCTGGCAAAGCTGTTAATGAAAGACAAAACTCGAACAAACACGAATGCTAGAGGGACAATGGGATATATGGCACCAGAATGGCTAAAAAATGCACCTGTTACTACAAAGGTGGATATCTACAGCTTTGGGGTGCTGTTGTTGGAAATCATATTTTGCAGAAGGCACATCAAGTTGCATCAAGTTGAGGATGGAACAACAGGTGAAGAGGATGACATGATACTCATAGATTGGGTTCTACATTTGGCCCAAAAAAACAACTTAAGAGCAGCAGTGAATGACGATCTTGAAGTTGAAAAGGTTCGAAAGAATTGCAATGGTTGGATTATGGTGCATAAATTCCAACCCAACTCTGAGACCATCTATCAAAATGGTGGTACAGATGTTGGAAGGAAATATACAAAAATAGAACCAAATTCAAGCATCACTGCAGGATCAAATTCTACTTGGAAATCACCCTCAGGTGATTTTGAATTTGGATTCTACGCTCTTCCCAGTGGTCTCTTTCTTGTGGGAATATGGTATGGAAGAATCCCAGAAACACTGGTATGGTACAGCAGCACCAGTGTGGAACCAAATTCTCAAATCCAATTCACTTCTGCAGGACAACTTGTGGTAGCACACCCAGATGGAAGTATTGCTCAAAACATATTCAGTGGTGCTGCAAGTTCTGCCCAAATGCGAGATGATGGCAACTTTGTGATGAAGAACTCCAACTTAAGACCTGTGTGGGAGAGTTTCAACTCTCCTGCCAACACTATCTTACCAGGCCAAACATTGCAGAGTAATCAAATCCTCTACTCCAAGGGAAAAGGAGATTCAAACTACTCATTGGGAAATTACATGTTACAAATGCAAAGGGATGGTAACTTGTTGCTCAAAGCTTACCATTGGTCAGACCCTGCATACTGGTACACTTCAACCTTGACCCCCAATGTGAGTTTGGTGTTTAATGCTACCACTGCTCTCATGTACCTAGTCAGTGGCAATAGGATTACATACTCCTTAAGCAACACTCCTCCAACCTCAGTGAAGGATTATTATCATCGTGCTACAATAGATGAGAATGGCAATTTCCAGCAGTATGCATATCACAAAAGGAATGGCACTGAGTGGAGGAGGGTTTGGAGGGCTGTGGAGGATCCATGTAGAGTGAATGCTATTTGTGGTGTTTATGGCTTTTGCACTTCTCCTAGCAATGAATCTGTCAAGTGTGAGTGTATTCCAGGTTATATCCCAATGGATCATCAAGATGTGTCTAAAGGGTGTCACCCACCGGCTGTCATCAATTACTGTGCAGAGATCAACTTCAAGCTGCAGGTCTTTGAAGACACTGATTTCCAATTTAACACTGATTTTTTTCGCTTAGCTAATGTGACTTTCCAAGGTTGTAAGAAGGCTGTAACGGATGATTGTAATATTGTTGCTGCAACTTATAACACACTCACCTCCACATGTGTGAAGAAGAGCCTGCCTTTGCTGAATGCTAGAAATAGCTCTTCTTCAAAGGGACAAATAGCACTACTTAAAGTTCCTAACACTGTTGAGTCTGGGACATTTGAAGTTCCCAAGAACAAGAGTTTTAATGTGAGAGTGTTTTTGAAGGTTCTGCTTGCAGTTACTGCCACTCTTGCTTGTTTCTTTGGTGCCTTTGCTGTCTACTATCATCCTTTCACTCAAAGACTAACAAGAAGAACGAAGTATCTGAATGAAACCGTTATTGGAATCAACTTCAGAGAATTCACCTTCCAGGAGCTGCATGAAGCAACAGATGGATTCACTAAGATTCTTGGAAGGGGAGCTTCAGGCAAAGTCTATCTTGGTGCTTTAACAATAGATAATGCAGAGATTGGTCTTGCAGTTAAGAAACTGGAAAAGAAAATTGAGAAAAGTGAAAGTGAATTCATGACTGAGCTCAAAATTATTGGCCGAACCCATCACAGAAATTTGGTGAGGCTTTTTGGCTTTTGCATTGAGAGTAGCCATAGAATTCTAGTGTATGAATTGATGCCAAATGGAGCACTGTCCAGCTTTTTGTTTGGAGAGGGAGAAAGGCCTCAATGGGGTCAGAGGATTGAAATGGCTCTTGGAGTTGCAAGAGGCTTGCTATACTTGCACGAAGAGTGCAAAACCCAAATCATACACTGTGATATCAAGCCCGAAAATGTCTTACTTGATTCCAATTACACAGTAAAGATTGCAGATTTTGGACTTTCCAAGCTTTTGAACAACGATCAAACTAGAACAAGCACTAATTTAAGAGGAACAATGGGATACATGGCACCTGAATGGCTAAGGAGTGCACCAATAACTGCCAAAGTAGACATATACAGTTTTGGGGTTATGCTATTGGAGATTATTTGCTGCAGGAGGCACATTGAGTCTTGTGAGGATGGAAAAAACAGTGAAGATGATGATTTGGTTCTTTCAAATTGGATTTTAAGGTGTGTGGTGTCTAGGAAACTAGAGGTAGTGGTGAGACATGACTCAGAAGTGCTGAATGATTTCAAGAGGTTTGAGGAAATGGCCTTGGTTGGACTGTGGTGTGTTCACCCAAATCCAGCTTTTAGACCATCAATAAAACAAGTGATGCAAATGCTAGATGGAACCGTGGAAGTTGGGGTTCCTCCTTTGGTTCATGATCTGATGATGGTAGGTCAGGGATTA 4616 0.4112 MALIFPTKMASKFLVLYLAIHLCSNVVRTANANSIELGSSIVAGTNSSWSSPSGDYAFGFYNLHSGLYLVGIWFDKIPNKTLVWSANRDNPVEIGSTINLTRRGQLVLQPVNGDSFPIYKGTDITSAAMQDDGNFVLRSSLSHVIWESFDSPTDTLLLGQTLNMGQNLYSNANGSVDYSKGQYSLEILSDGNIVLKAYRFTNSAYWWSDTAHNTGVQIIFNSTTAFLYVVNGTHQIIRNMAIEEIGKIEDYYQRVLVDDQGNFQKLIYHKDNGSEWKSVWNAVTKPCYVTVLCGVYGFCNTSDSDPQTYSCECLPGYTPLDPSAPSKGCYLSQVKDLCAANSSAKDFKLEVKSIQDANVPNDGYFFLDLQVMDKMDLESCKRELMNDCLCMAATFNGTACYKKKWPIINAIRIIPDTSNHVMLIKVPLVDNNKDNEKDSSSSLVILIVPLITCSLLAAFFAATASYHHPICQNLLHKRVPPKPKPMDINLKAFSFQQLKEATNGFKDQLGRGAYSTVYGGILSLEGQQVEVAVKQLEKVEDQGEKEFVTEVQVIALTYHRNLVGLLGFCNEQKHRLLVYEKMEIGTLSNFLFGEGGKPKWESRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTMGYMAPEWLKNAPVTTKVDIYSFGVLLLEIIFCRRHIKLHQVEDGTTGEEDDMILIDWVLHLAQKNNLRAAVNDDLEVEKVRKNCNGWIMVHKFQPNSETIYQNGGTDVGRKYTKIEPNSSITAGSNSTWKSPSGDFEFGFYALPSGLFLVGIWYGRIPETLVWYSSTSVEPNSQIQFTSAGQLVVAHPDGSIAQNIFSGAASSAQMRDDGNFVMKNSNLRPVWESFNSPANTILPGQTLQSNQILYSKGKGDSNYSLGNYMLQMQRDGNLLLKAYHWSDPAYWYTSTLTPNVSLVFNATTALMYLVSGNRITYSLSNTPPTSVKDYYHRATIDENGNFQQYAYHKRNGTEWRRVWRAVEDPCRVNAICGVYGFCTSPSNESVKCECIPGYIPMDHQDVSKGCHPPAVINYCAEINFKLQVFEDTDFQFNTDFFRLANVTFQGCKKAVTDDCNIVAATYNTLTSTCVKKSLPLLNARNSSSSKGQIALLKVPNTVESGTFEVPKNKSFNVRVFLKVLLAVTATLACFFGAFAVYYHPFTQRLTRRTKYLNETVIGINFREFTFQELHEATDGFTKILGRGASGKVYLGALTIDNAEIGLAVKKLEKKIEKSESEFMTELKIIGRTHHRNLVRLFGFCIESSHRILVYELMPNGALSSFLFGEGERPQWGQRIEMALGVARGLLYLHEECKTQIIHCDIKPENVLLDSNYTVKIADFGLSKLLNNDQTRTSTNLRGTMGYMAPEWLRSAPITAKVDIYSFGVMLLEIICCRRHIESCEDGKNSEDDDLVLSNWILRCVVSRKLEVVVRHDSEVLNDFKRFEEMALVGLWCVHPNPAFRPSIKQVMQMLDGTVEVGVPPLVHDLMMVGQGL 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01062 1537 SUPERFAMILY alpha-D-mannose-specific plant lectins 819 957 IPR036426 -
Pste1g01062 1537 ProSiteProfiles Bulb-type lectin domain profile. 34 150 IPR001480 -
Pste1g01062 1537 Pfam D-mannose binding lectin 81 165 IPR001480 -
Pste1g01062 1537 Pfam D-mannose binding lectin 840 912 IPR001480 -
Pste1g01062 1537 ProSiteProfiles Bulb-type lectin domain profile. 783 896 IPR001480 -
Pste1g01062 1537 ProSitePatterns Protein kinases ATP-binding region signature. 509 534 IPR017441 GO:0005524
Pste1g01062 1537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 625 637 IPR008271 GO:0004672|GO:0006468
Pste1g01062 1537 ProSitePatterns Protein kinases ATP-binding region signature. 1245 1271 IPR017441 GO:0005524
Pste1g01062 1537 CDD B_lectin 44 152 IPR001480 -
Pste1g01062 1537 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase LECRK1 29 150 - -
Pste1g01062 1537 Pfam S-locus glycoprotein domain 250 319 IPR000858 GO:0048544
Pste1g01062 1537 Pfam S-locus glycoprotein domain 991 1062 IPR000858 GO:0048544
Pste1g01062 1537 ProSiteProfiles Protein kinase domain profile. 1239 1531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 SMART egf_5 1030 1072 IPR000742 -
Pste1g01062 1537 SMART egf_5 286 330 IPR000742 -
Pste1g01062 1537 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 210 IPR036426 -
Pste1g01062 1537 Gene3D - 898 1037 - -
Pste1g01062 1537 Gene3D - 152 288 - -
Pste1g01062 1537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1361 1373 IPR008271 GO:0004672|GO:0006468
Pste1g01062 1537 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1318 1523 - -
Pste1g01062 1537 FunFam S-receptor-like serine/threonine-protein kinase 1208 1317 - -
Pste1g01062 1537 SUPERFAMILY Protein kinase-like (PK-like) 486 708 IPR011009 -
Pste1g01062 1537 Pfam Protein kinase domain 1243 1513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 Pfam Protein kinase domain 506 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 FunFam Putative receptor-like protein kinase 582 761 - -
Pste1g01062 1537 Coils Coil 1262 1282 - -
Pste1g01062 1537 Gene3D Transferase(Phosphotransferase) domain 1 582 767 - -
Pste1g01062 1537 Gene3D Phosphorylase Kinase; domain 1 480 580 - -
Pste1g01062 1537 Gene3D Phosphorylase Kinase; domain 1 1213 1317 - -
Pste1g01062 1537 Gene3D - 28 151 IPR036426 -
Pste1g01062 1537 Gene3D - 777 897 IPR036426 -
Pste1g01062 1537 FunFam Os04g0303100 protein 72 203 - -
Pste1g01062 1537 FunFam S-receptor-like serine/threonine-protein kinase 475 581 - -
Pste1g01062 1537 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 792 1525 - -
Pste1g01062 1537 Gene3D Transferase(Phosphotransferase) domain 1 1318 1524 - -
Pste1g01062 1537 SMART serkin_6 503 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 SMART serkin_6 1239 1515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 SUPERFAMILY Protein kinase-like (PK-like) 1215 1515 IPR011009 -
Pste1g01062 1537 ProSiteProfiles Protein kinase domain profile. 503 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g01062 1537 SMART blect_4 40 152 IPR001480 -
Pste1g01062 1537 SMART blect_4 789 898 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01062 Pste-Chr1 3427794 3435782 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01062 489 747 Receptor kinase-like Gene Family AT5G45780 40.152 1.83e-51 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste1g01062 Pkinase 3.4e-50 CL0016