Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01024 ACATGGCTTTCTTTCTTCTCTCCTACCTCTTCCTCCTTGCTACATCGGCCTCTGCCTGTGATCGCTGCTTGCACCAATCCAAGGCTGCCTATTTCTCCAAAGCGTCTGCTCTTTCATCTGGGGCATGTGGATATGGCTCTTTGGCACTAGACATAAGTGGTGGACACCTTGCAGCTGGTGTGCCTTCCCTCTTTAACAATGGAGCAGGTTGTGGTGCCTGCTTTCAGATAAGATGCAAGAACCCGAGTCTTTGCTCCAAAGAAGGTACCAGAGTGCTATTGACTGATCTTAATCACGATAATCAGACTGATTTTGTGCTCAGCAGCAGAGCCTTTGCTGGCATGGCTCACAAGGGTATGGGCCAACAAGTATTGAAGCTTGGCATTGTTGACATTGAATACACCAGAGTAGCCTGCGATTACAAGAAAAAGAATTTGGGCGTCCGAGTAGAAGAATCCAGCAAGAAACCCGATTACCTGGCAATAAAATTTTTGTACCAAGGGGGTCAAACAGAGATAGTTGGCGTTGATGTGGCAGAGGTTGGGTCTTCAAACTGGAGCTTCATGAGCAGAAACCACGGGGCAGTGTGGGACACAAGCAGGGTACCCCAAGGTGCATTGCAATTTCGGTTAGTGGTAACCGCAGGGTATGATGGGAAGTGGATTTGGGCAAAGAATGTCCTACCTGCTGATTGGAAAAATGGAGTGCTGTATGACTCTGGCATTCAGATAACAGACATTGCACAAGAGCCTTGTTCCCCCTGCCATCCTCCCACCTCCTCA 782 0.4859 MAFFLLSYLFLLATSASACDRCLHQSKAAYFSKASALSSGACGYGSLALDISGGHLAAGVPSLFNNGAGCGACFQIRCKNPSLCSKEGTRVLLTDLNHDNQTDFVLSSRAFAGMAHKGMGQQVLKLGIVDIEYTRVACDYKKKNLGVRVEESSKKPDYLAIKFLYQGGQTEIVGVDVAEVGSSNWSFMSRNHGAVWDTSRVPQGALQFRLVVTAGYDGKWIWAKNVLPADWKNGVLYDSGIQITDIAQEPCSPCHPPTSS 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01024 260 CDD DPBB_EXLA_N 15 140 - -
Pste1g01024 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 39 143 IPR007112 -
Pste1g01024 260 SUPERFAMILY PHL pollen allergen 143 239 IPR036749 -
Pste1g01024 260 Pfam Expansin C-terminal domain 147 228 IPR007117 -
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 78 88 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 215 232 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 115 130 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 58 69 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 164 179 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 PRINTS Major pollen allergen Lol pI signature 148 163 IPR005795 GO:0005576|GO:0019953
Pste1g01024 260 FunFam Expansin-like A2 12 139 - -
Pste1g01024 260 Gene3D - 12 139 IPR036908 -
Pste1g01024 260 SMART dpbb_1 57 133 IPR007112 -
Pste1g01024 260 FunFam Expansin-like A2 140 244 - -
Pste1g01024 260 PRINTS Expansin/Lol pI family signature 126 142 IPR007118 GO:0005576
Pste1g01024 260 PRINTS Expansin/Lol pI family signature 38 56 IPR007118 GO:0005576
Pste1g01024 260 PRINTS Expansin/Lol pI family signature 185 199 IPR007118 GO:0005576
Pste1g01024 260 PRINTS Expansin/Lol pI family signature 60 78 IPR007118 GO:0005576
Pste1g01024 260 PRINTS Expansin/Lol pI family signature 225 239 IPR007118 GO:0005576
Pste1g01024 260 Gene3D - 140 244 IPR036749 -
Pste1g01024 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 157 239 IPR007117 -
Pste1g01024 260 Pfam Lytic transglycolase 57 133 IPR009009 -
Pste1g01024 260 SUPERFAMILY Barwin-like endoglucanases 9 141 IPR036908 -
Pste1g01024 260 PANTHER EXPANSIN-B3 12 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01024 Pste-Chr1 3269510 3270793 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01024 3 254 Expansin Gene Family AT3G45960 64.173 1.51e-113 325
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01024 1 3269510 3270793 Pste1g01024 1 3269510 3270793 ECH