Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01021 ATGGCACCGACCCCGCCAAGAGAGAGGAGCCTCCTTCTTCTTTCTCCTCTTCTCGTTCTTCTCTCGTCCATGGAGCTTCAGAGGCGTCCAGATCAGTGCCTCCCGGAGAGGAAAGGGCAGAAGAGGAAGCTCGAGGAGGATTCCGACGACATCTCCGCTCCTCCCTCCGCCGACGCTCGCCACGCTCTCCTCTCCGACGTCAAGGAACAGGTCTCCCTCCTCGATTCCACCTTCTCATGGACCGAATCCGATCGCTCCGCCGCCAAACGCGCCACGCACGCCCTCGCCGATCTCGCCAAAAACGAAGACGTCGTGAATGTGATTGTTGACGGCGGCGCCATTCCGGCGTTGGTTAAGCATCTTCAAGCGCCTCCTCTGTCGGAAACCGACCGCTTGCAGAGGCCGTTGCCGTTTGAGCACGAAGTCGAGAAGGGAAGTGCTTTCGCTCTTGGACTTCTCGCCGTCAAGGTAGTTTCGTCACTGTTACTTTGCACCTTGACTTCTTCGGTTTTGCAAGTTCTGAAGCCTGTTCGGTTTCGTTATTTCTGTTTTTTATATGTCGGTGGAACTGTGAAGAGTTCTGTTAGGTTAAATTCACGTGCTACTGTTAATAATCCAGAGCATCAGCAGCTCATTGTTGACAGCGGTGCCTTGAAACATCTTGTTGATCTTTTGAAGAGGCATAAGAATGGCTTAACATCTCGTGCGATTAATAGTCTCATTCGTAGGGCTGCAGATGCAATCACTAATCTTGCTCATGAGAATAGCAGCATCAAGACTCGTGTCAGGATGGAAGGAGGGATTCCACCACTTGTTCATTTACTTGAATTTGCGGATACAAAGGTGCAAAGAGCTGCTGCTGGTGCATTGCGAACCCTTGCTTTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAACGCCCTTCCAACTCTGATTCTAATGCTTCGATCAGAAGATGCTGCTATTCATTATGAAGCGGTTGGTGTGATTGGAAATCTGGTTCACTCTTCTCCTAATATAAAGAAAGAAGTTCTTCTCGCTGGAGCCTTACAACCTGTTATTGGATTGCTTAGCTCTTGTTGCTCTGAAAGCCAGAGGGAAGCAGCATTATTACTTGGACAGTTTGCAGCAACTGATTCAGACTGCAAGGTTCACATTGTTCAGAGAGGTGCTGTCCGACCTCTGATAGAGATGCTTCAGTCATCCGATGTTCAGCTAAAAGAAATGTCTGCCTTTGCATTGGGGAGATTGGCCCAGGACACACATAACCAAGCTGGTATTGCACATAATGGTGGTTTGATGCCATTACTGAAGCTTCTTGACTCAAAAAACGGGTCTTTGCAACATAATGCTGCATTTGCTCTTTATGGCCTTGCAGATAACGAGGATAATGTGTCCGATTTTATTAGGGTAGGTGGAATTCAGAGACTACAGGATGGAGAGTTTATTGTTCAAGCAACCAAAGATTGTGTTGCAAAGACATTGAAAAGATTAGAAGAGAAGATTCATGGCCGTGTGCTGAACCATTTGTTATATCTCATGCGAGTTTCAGAAAAGGCTTTTCAAAGACGGGTAGCTTTGGCTCTTGCTCACCTTTGTTCAGCAGATGATCAGAGAAAAATATTTATTGATCACCATGGTTTGGAGTTGCTTATGGGGCTTCTTGGTTCTTATAACCCCAAGCAACAGCTTGATGGAGCTGTGGCTTTATGCAAGTTGGCTAATAAAACTATGACTCTGTCTCCTGTAGATGCTGCACCCCCATCTCCAACGCCCCAGGTCTATTTGGGAGAGCAGTATGTAAACAATGCTACGTTGTCTGATGTTACATTTTTGGTTGAAGGTAAACGATTTTATGCTCACAGAATCTGCCTGCTTGCATCTTCAGATGCATTTCGTGCAATGTTTGATGGTGGTTATAGGGAGAAGGAGGCACGAGACATAGAGATTCCAAACATTAGATGGGAGGTTTTTGAGCTGATGATGAGATTTATATACACTGGATCAGTTGATATCACTCTCGATATTGCCCAAGATCTCCTCCGTGCAGCTGATCAATATCTTCTAGAAGGACTTAAGAGACTCTCTGAGTACACGATTGCACAGGATATATCACTGGAGAATGTGTCAAGTATGTATGAACTTTCAGAAGCCTTTAATGCTATATCGTTGAGGCATACATGCATACTTTTTATCTTGGAGCACTTTGATAAATTGTGTGGAAAGCCAGGACACTCTAATCTGATTCAGCATATAATACCCGAGATCCAGAATTACTTCGTTAAAGCTCTCGCAAAGGCCAATTCCAACATCCAGCTGTAATATGTGCTGTTCTATTTTTAACATCTAACCAGTTGCAATGTACATAATGTGGCTGCTGATGTTCTTCCAATTGTTGAACCTGAGAAGGAAGTCTCCTAGCTCCTGGATCGAGTATCACACAGCTTAGAAAAATATCTAACATCAGGTCATGTACGTTCATTTCAAATGCAGTGTAAGTCCCTTTTAGCTGTAACGTCATTTTCTTAGATGTAGCAAATATGACCTTCACGAACATTGTTTTTTCCGTGCAATATTGTGATGGTTATGACTTGATAGTTCTCTTTCTCGATTGATGTGGCTCTAAAATTGTTGAGTTTATGTTAGTATAGGTTGCCCAAGCACCTCATGTATATATGACAATTAGATAGTTGTATGTAATTGTGCTAATGAATGTGTTGTAAATTAATTGCAAAATGCAATTGCATATAAAGTTTCAAATGCGTCATTTACATACTCAATACTCGTATGACCATAGCATGCTGAATTCAGTCGTTGCTTTATAAAAACTGGCTCTATTTATGCAGTCAAGCAACAATACTGTCTAAAATATCCAAACGATCACACAAAACTAGTGGACAAAATCGTCTGAATATTTTTTCCTGCTTTTATGGTGGTCGAGGAAAATCTGAGTAATGTACGAAAACTAATTTGATCAGTCTAAACAAGTGACATGAAAATTGAATGTGTCGTCTTATTGTATATAGTAAAAATCTAAAGCTTTTCTCTGAATGTAGCAGAATTTCTGGTGAGTTTTCCATGGGCGAATTGAAGGAGGGCCCAGTGGGAAAAGGCTTTGATTGTGTTATTTTTGAAGACAAATAGAAAAATGATTGGATTTTTTTTCCTGGGCACTACGAATTACCATTGAGGAAAAAGTATCCCAACGGTGCACTTCACTTGGAACAGACCAATTGGCTCATGTCATTTTGTGTTTGTTTCATAAATAGAGTAGACTGCAAGTCATTCTTTGCACCTGCATGAGATAAGTAGTTGTTTGCTGCATGAGATGGTGGTTTTCTATGCTTGTATCAATCAACACTTGGATATACTATGCACTCGCGTTCATTTTGTCTTTTTCATTGAGGCTGTAAACAATCATCGAATAACATTATGGTAATGTTAAAATGCAAAGTTTTTTG 3467 0.4205 MAPTPPRERSLLLLSPLLVLLSSMELQRRPDQCLPERKGQKRKLEEDSDDISAPPSADARHALLSDVKEQVSLLDSTFSWTESDRSAAKRATHALADLAKNEDVVNVIVDGGAIPALVKHLQAPPLSETDRLQRPLPFEHEVEKGSAFALGLLAVKVVSSLLLCTLTSSVLQVLKPVRFRYFCFLYVGGTVKSSVRLNSRATVNNPEHQQLIVDSGALKHLVDLLKRHKNGLTSRAINSLIRRAADAITNLAHENSSIKTRVRMEGGIPPLVHLLEFADTKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLRSEDAAIHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSCCSESQREAALLLGQFAATDSDCKVHIVQRGAVRPLIEMLQSSDVQLKEMSAFALGRLAQDTHNQAGIAHNGGLMPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSEKAFQRRVALALAHLCSADDQRKIFIDHHGLELLMGLLGSYNPKQQLDGAVALCKLANKTMTLSPVDAAPPSPTPQVYLGEQYVNNATLSDVTFLVEGKRFYAHRICLLASSDAFRAMFDGGYREKEARDIEIPNIRWEVFELMMRFIYTGSVDITLDIAQDLLRAADQYLLEGLKRLSEYTIAQDISLENVSSMYELSEAFNAISLRHTCILFILEHFDKLCGKPGHSNLIQHIIPEIQNYFVKALAKANSNIQL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01021 775 Gene3D - 56 237 IPR011989 -
Pste1g01021 775 SMART arm_5 537 577 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 422 462 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 339 379 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 101 155 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 255 295 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 381 421 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 297 337 IPR000225 GO:0005515
Pste1g01021 775 SMART arm_5 205 253 IPR000225 GO:0005515
Pste1g01021 775 Gene3D Potassium Channel Kv1.1; Chain A 600 744 IPR011333 -
Pste1g01021 775 FunFam Armadillo/beta-catenin repeat family protein 600 744 - -
Pste1g01021 775 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 392 434 IPR000225 GO:0005515
Pste1g01021 775 MobiDBLite consensus disorder prediction 30 54 - -
Pste1g01021 775 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 216 266 IPR000225 GO:0005515
Pste1g01021 775 CDD BTB_POZ_ARIA_plant 596 711 - -
Pste1g01021 775 MobiDBLite consensus disorder prediction 30 56 - -
Pste1g01021 775 Pfam Armadillo/beta-catenin-like repeat 262 294 IPR000225 GO:0005515
Pste1g01021 775 Pfam Armadillo/beta-catenin-like repeat 297 336 IPR000225 GO:0005515
Pste1g01021 775 Pfam Armadillo/beta-catenin-like repeat 381 420 IPR000225 GO:0005515
Pste1g01021 775 SUPERFAMILY POZ domain 601 703 IPR011333 -
Pste1g01021 775 Gene3D - 365 583 IPR011989 -
Pste1g01021 775 Gene3D - 238 364 IPR011989 -
Pste1g01021 775 SMART BTB_4 609 706 IPR000210 GO:0005515
Pste1g01021 775 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 308 350 IPR000225 GO:0005515
Pste1g01021 775 Pfam BTB/POZ domain 602 704 IPR000210 GO:0005515
Pste1g01021 775 ProSiteProfiles BTB domain profile. 609 676 IPR000210 GO:0005515
Pste1g01021 775 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 433 475 IPR000225 GO:0005515
Pste1g01021 775 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 24 158 IPR044282 -
Pste1g01021 775 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 266 301 IPR000225 GO:0005515
Pste1g01021 775 SUPERFAMILY ARM repeat 240 578 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01021 Pste-Chr1 3255555 3271096 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01021 268 474 U-box Gene Family AT3G46510 29.545 6.00e-14 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pste1g01021 BTB 1.2e-24 CL0033
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01021 1 3255555 3271096 Pste1g01021 1 3255555 3271096 ECH
Pste1g01021 1 3255555 3271096 Pste4g01460 4 10882055 10890004 PCT