Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01019 TCTCTAAATACCCATTTTCATTCCTTTTTTCTTTATTCTGTTGTAACGCTGTCATGGCCTCCGATGATGCCTTCAATGACAAGAACATCACGTTTCGAAGGCTTAAGGCAAAGTCTGAAAACAAGATGTGTTTTGATTGTAATGCGAAGAACCCAACTTGGGCCTCCGTCACCTATGGAATATTTCTTTGCATCGATTGCTCCGCTGCGCATCGCAGTCTTGGTGTCCATATCAGTTTTGTTAGATCCACAAATTTAGACTCTTGGAGTCTCGAGCAATTAAAAATAATGACATTTGGAGGAAATAATCGTGCACAATCTTTTTTTAAGCAACATGGTTGGACTGATACTGGTAAAATAGAGGCCAAATATACATCGAGAGCAGCGGAGTTATATAGACAAATTCTTTCTAAGGAAGTAGCTAAAAGCATGATTATGGAGGCAAGTTTATCATCATCACCTGTTACTTCACAATCAAAACAAGGTTATGAAAAACTTGCTAAAGTAAAGATCGATGAATTACCAAAAGAAGATACTTTTCGAAAACCTGAAATGCCAGAGAGCACTTCACCCAAAGCTTCACAAACAATAGTTTCCAATGTTATAAGAAAACCTATTAGTGCCAAAATAATTGGAAAGACGGGAGGACTTGGTGCCCGTAAGCTTATTAAAAAGTCAAACGAGTCTCTTTATGAGCAGAAACCAGAAGAACCACCACCTTTAGTTACTTCTTCATCAAATAATGATTTGCTAATTTCGAGGTCACAGTCAACATCTCAATTGGAACATATAGAAAATGTCCGATCATCTGAATTGAATTCTGAAGGTCAGGGTACGCATCACTTTAGGCATGAATCTGATGAAGCTAGACGGAAGTTCTCAAACGCTAAATCTATTTCTTCTTCCCAATTTTTTGGAGATCAAAACAAAACTGCA 935 0.3765 MASDDAFNDKNITFRRLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAAHRSLGVHISFVRSTNLDSWSLEQLKIMTFGGNNRAQSFFKQHGWTDTGKIEAKYTSRAAELYRQILSKEVAKSMIMEASLSSSPVTSQSKQGYEKLAKVKIDELPKEDTFRKPEMPESTSPKASQTIVSNVIRKPISAKIIGKTGGLGARKLIKKSNESLYEQKPEEPPPLVTSSSNNDLLISRSQSTSQLEHIENVRSSELNSEGQGTHHFRHESDEARRKFSNAKSISSSQFFGDQNKTA 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01019 294 Gene3D Arf GTPase activating protein 1 150 IPR038508 -
Pste1g01019 294 SUPERFAMILY ArfGap/RecO-like zinc finger 14 127 IPR037278 -
Pste1g01019 294 MobiDBLite consensus disorder prediction 156 176 - -
Pste1g01019 294 MobiDBLite consensus disorder prediction 259 276 - -
Pste1g01019 294 CDD ArfGap_ArfGap2_3_like 9 124 - -
Pste1g01019 294 MobiDBLite consensus disorder prediction 234 258 - -
Pste1g01019 294 SMART arf_gap_3 11 127 IPR001164 GO:0005096
Pste1g01019 294 ProSiteProfiles ARF GTPase-activating proteins domain profile. 11 116 IPR001164 GO:0005096
Pste1g01019 294 MobiDBLite consensus disorder prediction 277 294 - -
Pste1g01019 294 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 6 293 - -
Pste1g01019 294 PRINTS HIV Rev interacting protein signature 42 59 IPR001164 GO:0005096
Pste1g01019 294 PRINTS HIV Rev interacting protein signature 23 42 IPR001164 GO:0005096
Pste1g01019 294 PRINTS HIV Rev interacting protein signature 63 84 IPR001164 GO:0005096
Pste1g01019 294 FunFam ADP-ribosylation factor GTPase-activating protein AGD10 2 138 - -
Pste1g01019 294 MobiDBLite consensus disorder prediction 234 294 - -
Pste1g01019 294 Pfam Putative GTPase activating protein for Arf 14 111 IPR001164 GO:0005096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01019 Pste-Chr1 3249950 3257843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01019 14 92 C2H2 Transcription Factor Family AT4G21160 46.250 1.02e-19 85.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01019 1 3249950 3257843 Pste1g01019 1 3249950 3257843 ECH
Pste1g01019 1 3249950 3257843 Pste7g00096 7 823860 831476 PCT