Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g01014 AGAGTCTCTCCCTCCTGGTTGGAAAGTAGGTAAAGTGCAGTATTCATCATAACTCATAAGCAAGCATATTAACATGGAAGACATGAACATGAGTGGGGAAATTGCACTTCCAGGCTTCCGATTCCACCCAACGGAAGAAGAGCTTCTGGATTTCTATCTTAAGAACATGATTATTGGCAAGAAACTTCGTTACGATGTCATTGGTTTCCTCAACATCTATCACCATGATCCCTGGGACTTGCCTGGTTTGGCAAAGGTAGGAGAAAGAGAATGGTACTTCTTCGTGCCAAGGGATAAAAAGCATGGGAGCGGAGGAAGGCCTAACCGCACCACTGAAAAAGGGTTCTGGAAAGCCACCGGTTCAGACCGGAAGATAGTGACCTTGTCTGATCCAAAGCGTATCATTGGTTTAAGGAAGACCCTGGTTTTCTATCAGGGAAGAGCTCCTAGGGGAAACAAGACCGATTGGGTCATGAATGAGTACCGTTTACCTGACAATTCCAAATTACCTAAGGAAATTGTGCTATGCAAGATATATAGAAAGGCAACTTCGTTGAAAGTGTTGGAACAAAGGGCAGCACTGGAGGAAGAAAGAGAGATGAAGCAAATGGTTGGTTCGCCTGCATCGTCGACGGAGACCATGTCCTTTAGCAGCCACCAGGAAGAGCAAAACGTGGCTCTGCCCTTGTTGTCACATGTTCTTAAGAAAGAGTCTGAAACTGAAACGGAAGAAATGCTAGTGTCTGTGCCTGTGCTAAAACAAGAGAAAATAACAACTAGCCAACTGGCTTTGAAAGACACCAAAACCACTTGTGCCACATCGCTACAATTGCCCTTCGGAAAGGAGAAACTGCCAGACCTTCAACTACCTATGCTCACTGATTGGACCCAAGATACCTTCTGGGCTCAGTTGAATAGTCCATGGCTCCAAAACTTTACTCCTTCCAATATCTTAAACTTCTACTGACTCCATGCATCATTATTCATTACTTAAATCAATCAACTGCCAACTTAGTCATTACCTTTTTATTTTGGATTGTATATGCAGTCAATTAATTATAATTAATAACGTTTTTTTTATATTACCTCTATTAACTACACAGGTTTTCGTCCACATATATGTTTTTTTCAAACTCTGCCTAGCTCAAACATTTTGTGGACTATTTTCCCGTTCCTTCAATCAATGATCAAGAAGTAAATTTTCTCACCACTAACATTTTGGAGACTTGTTTTAATAACCATTCTGCTCTTCTTCCTTCTCAATAACATTTCATATTCCATAGGTCCTTTTATATTTCTTT 1301 0.4097 MEDMNMSGEIALPGFRFHPTEEELLDFYLKNMIIGKKLRYDVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDKKHGSGGRPNRTTEKGFWKATGSDRKIVTLSDPKRIIGLRKTLVFYQGRAPRGNKTDWVMNEYRLPDNSKLPKEIVLCKIYRKATSLKVLEQRAALEEEREMKQMVGSPASSTETMSFSSHQEEQNVALPLLSHVLKKESETETEEMLVSVPVLKQEKITTSQLALKDTKTTCATSLQLPFGKEKLPDLQLPMLTDWTQDTFWAQLNSPWLQNFTPSNILNFY 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g01014 297 FunFam NAC domain-containing protein 67-like 20 161 - -
Pste1g01014 297 Gene3D NAC domain 20 161 IPR036093 GO:0003677|GO:0006355
Pste1g01014 297 SUPERFAMILY NAC domain 10 157 IPR036093 GO:0003677|GO:0006355
Pste1g01014 297 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Pste1g01014 297 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 10 214 - -
Pste1g01014 297 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g01014 Pste-Chr1 3241142 3242960 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g01014 6 297 NAC Transcription Factor Family AT2G17040 58.644 7.12e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pste1g01014 NAM 3e-34 No_clan