Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00992 TGGAATTGGTACCAAAAACCAACTAAGAGAGAAAATTTTCAATTTTGGGTTTTCTGAATTTCGGATGGTTGACTCTAATTTTAGGAGCTGAAAAAGTGCTAAATCTAACGTTGGATGAAATGTCGATCCGAGAGTTCTGTTTTTGGATCAAAGGTTGCACTTTGTTGGCCTTAGTATCTACCATTTCCAGTCTGGAACCCGAACTGGGATCAACCCGCGTTGTCTTTCAGACAAATTATGGGGATATTGAATTTGGTTTCTATCCAACTATTGCACCCAAAACTGTTGACCACATTTTTAAGCTTGTGCGACTTGGAGGCTATAACACTAACCATTTCTTTCGGGTGGATAAGGGTTTTGTGGCCCAAGTAGCAGATGTTACAAATGGAAGATCCGCTCCCATGAATGAGGAGCAAAGAAGAGAAGCAGAAAAGACTGTTGTTGGAGAATTTAGTGAAGTCAAACATGTTCGGGGTATTCTTTCCATGGGAAGGTATGATGATCCGGACAGTGCTTCATCCTCATTTTCGATGCTACTTGGAGATGCTCCTCATCTTGATGGCAAGTATGCAATATTTGGAAAAGTTACGAAAGGTGATGAAACATTGGCAAAGCTTGAAGAACTACCTACCCGTAAAGAGGGCATATTTGTAATGCCAATGGAACGCATCACTATCCTGTCATCATACTACTATGACACAGAGATAGAAAATTGTGAGCAAGACAGATCAATTTTGAAGCGCAGACTAGCTGCCTCAGCTCTCGAAGTTGAAAGACAGAGGATGAAATGCTTTCCGTGAGCAGGTTTGATGTGAATTTGGAATGAACATCACACTGCTGCATTCTCATTTTATATAATGTCCAATCAATGTATCCAGATATTGCTTTTGTTATGTATGAGAAAGTGTTCTTAATATGCACAGTTTATTGTTTCATCCAAAAATGCAGTGTGTTTAGTAAATGTAGTAAAGAATAATAGACAATTATATTAAATTTATTTTATTTAGAATTGAATAGATAAATATTTGAAATATTAATAATTAGTATAGCTATCAAATTCTCAA 1064 0.3712 MSIREFCFWIKGCTLLALVSTISSLEPELGSTRVVFQTNYGDIEFGFYPTIAPKTVDHIFKLVRLGGYNTNHFFRVDKGFVAQVADVTNGRSAPMNEEQRREAEKTVVGEFSEVKHVRGILSMGRYDDPDSASSSFSMLLGDAPHLDGKYAIFGKVTKGDETLAKLEELPTRKEGIFVMPMERITILSSYYYDTEIENCEQDRSILKRRLAASALEVERQRMKCFP 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00992 226 Gene3D - 21 200 IPR029000 -
Pste1g00992 226 SUPERFAMILY Cyclophilin-like 31 194 IPR029000 -
Pste1g00992 226 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 34 187 IPR002130 GO:0000413|GO:0003755
Pste1g00992 226 CDD cyclophilin 35 188 - -
Pste1g00992 226 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 35 191 IPR002130 GO:0000413|GO:0003755
Pste1g00992 226 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 14 226 IPR044233 -
Pste1g00992 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 47 62 IPR002130 GO:0000413|GO:0003755
Pste1g00992 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 148 163 IPR002130 GO:0000413|GO:0003755
Pste1g00992 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 73 85 IPR002130 GO:0000413|GO:0003755
Pste1g00992 226 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 119 134 IPR002130 GO:0000413|GO:0003755
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00992 34 192 U-box Gene Family AT5G67530 29.940 7.36e-12 62.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00992 1 3148263 3163379 Pste1g00992 1 3148263 3163379 ECH