Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00988 TTTCATTGAGAGATGAGAGGGTTGACATGCGGTGCAGTAGAGATCTCACAAATGAAGGCTGCAGACAGTGTTTGGAGGCCATGTTAGCACAGCTTCCTAAATGTTCTGGGCAAAAAATAAGATGTCTAATTTTTATGATCATCAAATCTTCTAACCAAACATCTTCACTTCCTGTGCCAAATATGCAAACATGCTTCTTCTATGTTGTCACACCAAAACTTGGGGTGTATATTGCTTTTGGTATACCAGAAGTGTTAGAAAAGGAAATTCTACCAGATGTAACACACAAATTGCAGTTAAAAGGCTTTCAGAATTTTCCTTTCAAGGCTCTTAGGACTAATTTGCAACATCGCAACCTGATAAAAATTTTGGCATGTTGCTTGAATGAAAATGAAAAGATACTTGTATACGAGTATTTTCAGAATAAAAGTCTCAACATTCACCTGTTTGATGACGAAAAAAGAAAACAATTAGATTGGAAACTGAGATTAAAGATTATAAATGGAATAGCAAGGGGTATTCTATACCTTCATGAGGACTCAAGAGTCACAATTATTCATAGAGAACTCAAAGATAACAATGTTCTGTTAAACCATGATATCAATTTTAAAATATCATATTTTGGGTTGGCAAGGGCATTTGAAACAGGACAGAGTCAAGAAAAAACAAAACAGATTAATGGGCAAGTATGCTATGCAAGGATTATTTTTGCTGTTTTCAGTTTTGTAGTTCTTGTTCTAGAAATCATTTGTGGAAAAAAGAATAGTGGATTATACACGTTAGAGCATGATAAAACTCTTTTTATATGTGAGTCTTCACTGCTGTCTGGCTTGGAGAATATGATATGCAGGAAAATGTTTGGAATTGATGGATCCAATACTCGTAAAATCCTTCTTAAGCAGTGCATACATATTGGCTTGCAGTGTGTTCAAGAAGATGCAAAAGATAGACCAACCATGTCTGATGTTGTTGTAATGTTGGTAACTGAGTCAATGGCCTTCCATAACCCAAGCATGGGGCATTTTCAATTGGAA 1034 0.354 MRCSRDLTNEGCRQCLEAMLAQLPKCSGQKIRCLIFMIIKSSNQTSSLPVPNMQTCFFYVVTPKLGVYIAFGIPEVLEKEILPDVTHKLQLKGFQNFPFKALRTNLQHRNLIKILACCLNENEKILVYEYFQNKSLNIHLFDDEKRKQLDWKLRLKIINGIARGILYLHEDSRVTIIHRELKDNNVLLNHDINFKISYFGLARAFETGQSQEKTKQINGQVCYARIIFAVFSFVVLVLEIICGKKNSGLYTLEHDKTLFICESSLLSGLENMICRKMFGIDGSNTRKILLKQCIHIGLQCVQEDAKDRPTMSDVVVMLVTESMAFHNPSMGHFQLE 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00988 336 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 103 320 - -
Pste1g00988 336 FunFam Os07g0541700 protein 131 220 - -
Pste1g00988 336 Gene3D Phosphorylase Kinase; domain 1 84 130 - -
Pste1g00988 336 SUPERFAMILY Protein kinase-like (PK-like) 104 318 IPR011009 -
Pste1g00988 336 Pfam Protein tyrosine and serine/threonine kinase 104 317 IPR001245 GO:0004672|GO:0006468
Pste1g00988 336 Gene3D Transferase(Phosphotransferase) domain 1 131 320 - -
Pste1g00988 336 ProSiteProfiles Protein kinase domain profile. 1 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00988 Pste-Chr1 3123976 3126528 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00988 92 333 Receptor kinase-like Gene Family AT4G23190 44.788 6.21e-61 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00988 PK_Tyr_Ser-Thr 1.4e-21 CL0016