Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00985 ATGATGTCACTTTCACCTAGCTTAGGTTCTCCCAACAATCTCTTGCTTAGAGAAATGAAATCTGAGGAAAGGGGTTTGTGCTTGATCCATTTGTTGCTCACTTGTGCAAATCACGTGGCTGCTGGTAACCTTGAAAATGCTAATACCTCACTTGAGCAAATTTCACTGCTTGCTTCCCCTGATGGGGATACTATGCAGCGAATCTCAGTATATTTTATGGAATCACTTGCTGATCGGATTCTTAAAACCTGGCCCGGGATCCACAGAGCCCTCAACTCGACCAGAATGACTCTGCTATCCGATGAAATTCTTGTTCAGAAGCTCTTCTTTGAGCTATTCCCTTTCTTGAAGGTGGCATTTGTTCTCACAAATCAGGCCATCATTGAAGCAATGGAAGGGGAGAAAGTGATTCACATAATTGATCTCAATGCTGCTGAAGCTGCTCAGTGGATTGCTCTCCTCCAGGTTTTGAGTGCGCGTCCCGAAGGCCCTCCTCATTTGAGAATCACCGGGGTTCATCCTAAAAAGGAGATTTTGGATCAGGTAGCTCATAGACTAACTGAAGAAGCAGAGAAGTTGGATATACCATTCCAATTCAACCCTGTAGTAAGCAAATTAGAAAATCTCAATTTTGACAAACTTCGTGTGAAAACTGGGGAGGCACTAGCAATAAGTTCCACTCTCCAATTACATTCTCTTTTGGCCTGGGGTGATGAAGTCATGCAGAGAAAGTCTCCTCTTCTGTCAAAAAGCTCAAATGGAATTCACCTGCAAAGAGTTCTGCCAATAGGCCAAAGCACATTGAGTGATTTGCTTGAGAAAGATATGATTAATGGGTACACTCCAAGTCCTGACTCAACCTCATCATCACCAGCATCTTTAACTACTTCCAATTCAATGAATATGGAGAGTTTTCTTAATGCTTTATGGGGTTTATCACCAAAGATCATGGTTGTGACAGAACAAGACTGCAATCATAATGGTCCAACTCTTATGGATAGGGTACTTGAAGCTCTATATTCTTATGCAGCACTGTTTGATTGTTTGGAATCCACAGTCTCAAGAACATCATTGGAGAGATTAAAGGTGGAGAAGATGCTTTTTGGTGAGGAAATAAAGAATATTATTTCCTGTGAGGGATCTGAACGAAAGGAGAGACATGAAAAGCTGGACAAGTGGTTTCAAAGATTTGATCTAGCTGGGTTTGGTAACGTGCCTTTGAGCTATTTCGGTATGTTGCAAGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAGGGATATAGAATGAGAGATGAAAATGGTTGTGTGTTAATTTGCTGGGAGGATCGGCCTATGTTTTCAATATCTGCTTGGAGATCTAGGAAGTAG 1368 0.4203 MMSLSPSLGSPNNLLLREMKSEERGLCLIHLLLTCANHVAAGNLENANTSLEQISLLASPDGDTMQRISVYFMESLADRILKTWPGIHRALNSTRMTLLSDEILVQKLFFELFPFLKVAFVLTNQAIIEAMEGEKVIHIIDLNAAEAAQWIALLQVLSARPEGPPHLRITGVHPKKEILDQVAHRLTEEAEKLDIPFQFNPVVSKLENLNFDKLRVKTGEALAISSTLQLHSLLAWGDEVMQRKSPLLSKSSNGIHLQRVLPIGQSTLSDLLEKDMINGYTPSPDSTSSSPASLTTSNSMNMESFLNALWGLSPKIMVVTEQDCNHNGPTLMDRVLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIISCEGSERKERHEKLDKWFQRFDLAGFGNVPLSYFGMLQARRFLQSYGCEGYRMRDENGCVLICWEDRPMFSISAWRSRK 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00985 455 ProSiteProfiles GRAS family profile. 19 452 IPR005202 -
Pste1g00985 455 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 24 451 IPR005202 -
Pste1g00985 455 Pfam GRAS domain family 28 452 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00985 Pste-Chr1 3118174 3119541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00985 16 455 GRAS Transcription Factor Family AT1G50420 65.618 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste1g00985 GRAS 1.2e-135 CL0063