Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00984 ATGGAGATAGAAAAAAGTGGAGATCAAGAATTTGCTCTTGAAGAGGAAGTTCGTTTTGAGCATGTGTTCGGAGAAGTCAATGTAGTTGCTAATAACTTGGCTAGGAGTGGCCATTTGCTAGATACAAAGTATATGAGTTGGAATTCTTCCTTTGAAGATCTACCACCCCTTCTTGCGAATGATCCAGTGACTTAAATTCATGTTGATGGTAGCTGCAAAGGGAACCTCGAGATTGGGAAACTTCTCGCATTGTCGAGATTGGGAAACTTCTCGGTGATGCCACTAGAAATGGATCCATGGATTTTATGGCTGTATTGGTCATGCGGAGATCTTGACAACTTGTTAGCTAAAAAAGGCGCATATGCTAAAATTGTTGGAGCTCTGGTCTTTCAATGCCCCTTCTGTTCCAAGCTGTTTGGCTCTGGTCAAGCTCTCGGTGGCCACAAGAGATCTCACCTCATGCCTTCTTCCTCTTCAACTGCTGATGATTCTACTAGATTCAAAGACACTTTCATAGATCTCAACCTCCCTGCTCCCTCCGAAGAAGAAGACCTTAGTGTTGTTTCCGATGCCTAA 576 0.434 MPLEMDPWILWLYWSCGDLDNLLAKKGAYAKIVGALVFQCPFCSKLFGSGQALGGHKRSHLMPSSSSTADDSTRFKDTFIDLNLPAPSEEEDLSVVSDA 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00984 99 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Pste1g00984 99 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Pste1g00984 99 SUPERFAMILY beta-beta-alpha zinc fingers 36 61 IPR036236 -
Pste1g00984 99 Pfam C2H2-type zinc finger 37 61 - -
Pste1g00984 99 PANTHER ZINC FINGER PROTEIN ZAT1-RELATED 35 99 IPR044303 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00984 Pste-Chr1 3117391 3122100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00984 32 96 C2H2 Transcription Factor Family AT3G60580 46.377 1.64e-16 70.5