Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00983 ATTAATCTCAGCTTCATGATCCTTCTTCTAACCACAACAAATGCACAAGCACCAATTTACAATACAAATTTTTGTGAGAAGTCAACTCATATTAGCCCTTCATACAAAACCAATGTTAAAACCCTCATCTGTTGGGCAACTAATAACAATAACGGTTTCGGTGATGTTGTTTATAGTTTGTACAGCTGCAGATACGACATCACAAGATATTTGTGTCAGTTCTGTCTTACCAGTGCTGCCAACGACATCTCTCGGCTGTGTCCTAATAGTGTAACAGCTATTATATGGTATGATGTATGCATCCTTCGTTACTCACACCAGAATTTCCATGGCAAAGTTAGTTTAAGCCCAATATGGAACATTACCGGACCCAGAAAAATCAAGGTAATGTTTGAGGAAGGATTAATTATGGAAAATATTGGATCTATCTTTGTTGATTTGTCATGTTTAACATATTGTATGCTATACCTTATTTCTGGCCAAGAAGGAACTAGTAATTCAAGAAAGTTGATAATTTCCTTAAGTGTCTTGCGGTTTGTAGTTTTACTATGTTTCAGTGTCTACTTCTTCTGGTGCAGGAAACGAGTTAGAGAAGATGCGATATCGCTCGAAGAGGAAACATGGAATGGAGACTTGCCAACAATCCCATTAATCAGAATTCTACAAAGTACCAATAACTGTTCAGAAACTTCTAAATTAGGGGAAGGGAATGCTACCAAATGGAAGACAAATTGCAGTAAAAAAAACTCAAAATTCTCTGGTCAAGGTTCAGAAGAGTTCAGAAATGAAATAATGTTTATAGCTAAATTACAACATCGAAACCTTACTTTTGGGATATTGCTTGGAGAAAATGAGAAGATACTTGTATATGAGTATATGTCTAATGGAAGCCTCCACTCTCACTTGTTTGATTATGAGAAAAAAATGCAGCTTGATTGGAACTTAAGATTGAGAATTATTAATGGAATAGCAAAAGGTATTGTATACCTCTACGAGGATTCTAGACTCAGAGTAATTCACAGGGATCTCAAAGCTAGCAGTGTCTTATTAGATGATGAGATGAATCCTAAAATATCAAATTTTGGATTAGCAAAAGCATTTGAAATAGGAAAAAACCAAGCAAATCGGACAAAACCAAGCAAATACAAAACGAGTAATGGGAACATTTGGATACATGGCTCCGGAATACGCTATGCAAGGATTATTTTCAAATCATTATTGTCAAAAAGAACAGTGATTCCATTTGTCAGACCATGGTCAAAGTCTTCTTTTGCTTGGAACGTATGGTATGCAGGAAAATGTTTGGAATTGATGGATCCAGTGTTGGTGAAATCCTTCATAGCTAGTGAAGTTGAGAAGTGCTTACACATTGGTTTGTTGTGTGTTCAACAAGAAGCAGAAGATAGACCAACTATGTCCACTGTTGTTCTAATGCTTGGAAGTGAAACAATGACTCTTCCAAAACCTAACAGCCAGCATATTCAGTTGCCAAAACAACATCAACTTCAAGAAGTTCCAATAATGATGTAA 1530 0.3601 INLSFMILLLTTTNAQAPIYNTNFCEKSTHISPSYKTNVKTLICWATNNNNGFGDVVYSLYSCRYDITRYLCQFCLTSAANDISRLCPNSVTAIIWYDVCILRYSHQNFHGKVSLSPIWNITGPRKIKVMFEEGLIMENIGSIFVDLSCLTYCMLYLISGQEGTSNSRKLIISLSVLRFVVLLCFSVYFFWCRKRVREDAISLEEETWNGDLPTIPLIRILQSTNNCSETSKLGEGNATKWKTNCSKKNSKFSGQGSEEFRNEIMFIAKLQHRNLTFGILLGENEKILVYEYMSNGSLHSHLFDYEKKMQLDWNLRLRIINGIAKGIVYLYEDSRLRVIHRDLKASSVLLDDEMNPKISNFGLAKAFEIGKNQANRTKPSKYKTSNGNIWIHGSGIRYARIIFKSLLSKRTVIPFVRPWSKSSFAWNVWYAGKCLELMDPVLVKSFIASEVEKCLHIGLLCVQQEAEDRPTMSTVVLMLGSETMTLPKPNSQHIQLPKQHQLQEVPIMM 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00983 509 Pfam Salt stress response/antifungal 32 106 IPR002902 -
Pste1g00983 509 Gene3D Transferase(Phosphotransferase) domain 1 401 496 - -
Pste1g00983 509 SUPERFAMILY Protein kinase-like (PK-like) 213 491 IPR011009 -
Pste1g00983 509 Gene3D Transferase(Phosphotransferase) domain 1 217 391 - -
Pste1g00983 509 FunFam Os07g0541700 protein 293 381 - -
Pste1g00983 509 Pfam Protein tyrosine and serine/threonine kinase 251 374 IPR001245 GO:0004672|GO:0006468
Pste1g00983 509 Gene3D - 10 109 IPR038408 -
Pste1g00983 509 ProSiteProfiles Gnk2-homologous domain profile. 6 109 IPR002902 -
Pste1g00983 509 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 72 489 - -
Pste1g00983 509 ProSiteProfiles Protein kinase domain profile. 201 509 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00983 Pste-Chr1 3115672 3119511 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00983 57 505 Receptor kinase-like Gene Family AT4G23190 32.632 3.07e-71 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00983 PK_Tyr_Ser-Thr 8.7e-19 CL0016