Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00981 CCCTCCTCCTTCTTCTTCTTCCACACCACCACCTCCAAAACAAGCCCTCCTACTCCTCCTCCTTCTTCTTCTCCATCACTACCTCCAACACATGCTCCTTCTCCTCTTCCTCCACCACCTTCTTCACCCTCTTCAGCATGCAAGTCCACACTATATCCAAAACTATGCCGCTCCATTCTCTCATCCATTCGCTCCTCCCCTTCTGACCCCTACAACTTAGGAAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAGAAGCTAGCCAAAGTCTTCACCAACTTCCTCACAAAACAAAAATCCTCTCCCCTCAACAACTTAGAAATCGCAGCCCTAGAAGACTGCAGCGAGCTCAACCAGCTCAGTGTTGGCTACTTAGAATCTGTCTCACAAGAACTCAAATCAGCAGACCCTTCCAACACAGAATTGGTGGAAAAGATTGAAACATATCTCAGTGCTGTGGCCACTAACCACTACACTTGCTATGATGGGTTAGTAACAATCAAGAGCCCCATTGCCAATGCTCTTGCTGTGCCTCTCAACAATGTCACCAAACTCTACAGTGTGTCACTTGGCTTGGTCACACAGGCTCTTAAGAAAAACCTCAAAAAGCATAAGACTCGCAAACATGGTCTTCCCACCACAGATTACAAAGTCAGGCAGCCATTGAAGAAGCTCATTAAGCTTCTTCACACAAAGTACAGTTGCGCAGCATCATCCAACTGTAGTACTAGAAGTGAAAGGATTCTCAAAGAAACTGAGAATAAAGGAATTCTACTTAAAGAGTTTGCTATTGTGAGCCTTGATGGCACAGAGAACTTTACCTCCATTGCAGAGGCTATTACTGCTGCACCAGATTATCTAAGGCCTGAAGATGGCTATTTTCTTATCTATGCCAGAGAGGGAAACTATGAGGAATATGTCAATGTTCCCACTCAAAAGAAGAATATTTTGCTTATTGGTGATGGCATTAACAAGACTTGCATCACAGGAAATCATAGTGTTGTGGATGGTTGGACCACTTACAATTCTTCAACCTTTGCTGTTGCTGGAGAAAGATTTGTTGCAATTGATGTTACATTCAGAAACACAGCTGGTCCTCAGAAGCACCAAGCAGTAGCTGTGAGGAACAATGCAGACCTCTCCACATTCTACCGTTGTAGCTTTGAAGGATACCAAGACACTCTTTATGTTCACTCTCTCAGGCAATTCTATAGGGAATGTGACATTTATGGCACTGTGGATTTCATTTTTGGCAATGCTGCTGTGGTTCTCCAAAGCTGCAACATCTACGCCAGAAAACCAATGCCAAACCAGAAGAATGCTGTCACAGCACAAGGGAGAACTGACCCCAATCAAAACACTGGAATTTCAATCCAAAATTGTAAGATTGATGCTGCACCTGACTTGGCTGAAGATTTGAATTCAACTAAAACTTACTTGGGCAGGCCATGGAAAGTGTATTCAAGAACTGTGTACATGCAATCATATATTGGAAATGTAATTCAATCTGCTGGATGGTTAGAATGGAATGGCACTGATGGTTTAAGTACCCTATTTTATGGTGAGTTTGATAACTTTGGACCTGGTTCTGATACCAGCAAAAGGGTACAATGGAGTGGTTACAGTCTGTTGAGTGCTACTCAAGCTTGGAACTTTACTGTGCTTAATTTTACCTTGGGGAATACTTGGCTTCCAGATACAGATATACCCTACACTGAGGGACTT 1728 0.4317 PSSFFFFHTTTSKTSPPTPPPSSSPSLPPTHAPSPLPPPPSSPSSACKSTLYPKLCRSILSSIRSSPSDPYNLGKFSIKQSLKQAKKLAKVFTNFLTKQKSSPLNNLEIAALEDCSELNQLSVGYLESVSQELKSADPSNTELVEKIETYLSAVATNHYTCYDGLVTIKSPIANALAVPLNNVTKLYSVSLGLVTQALKKNLKKHKTRKHGLPTTDYKVRQPLKKLIKLLHTKYSCAASSNCSTRSERILKETENKGILLKEFAIVSLDGTENFTSIAEAITAAPDYLRPEDGYFLIYAREGNYEEYVNVPTQKKNILLIGDGINKTCITGNHSVVDGWTTYNSSTFAVAGERFVAIDVTFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVLQSCNIYARKPMPNQKNAVTAQGRTDPNQNTGISIQNCKIDAAPDLAEDLNSTKTYLGRPWKVYSRTVYMQSYIGNVIQSAGWLEWNGTDGLSTLFYGEFDNFGPGSDTSKRVQWSGYSLLSATQAWNFTVLNFTLGNTWLPDTDIPYTEGL 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00981 576 Pfam Plant invertase/pectin methylesterase inhibitor 44 192 IPR006501 GO:0004857
Pste1g00981 576 CDD PMEI-like_3 46 195 - -
Pste1g00981 576 Gene3D Invertase/pectin methylesterase inhibitor family protein 42 197 IPR035513 -
Pste1g00981 576 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 196 IPR035513 -
Pste1g00981 576 SUPERFAMILY Pectin lyase-like 263 575 IPR011050 -
Pste1g00981 576 FunFam Pectinesterase 259 576 - -
Pste1g00981 576 Gene3D - 260 576 IPR012334 -
Pste1g00981 576 MobiDBLite consensus disorder prediction 1 46 - -
Pste1g00981 576 SMART PMEI_2 38 193 IPR006501 GO:0004857
Pste1g00981 576 PANTHER PECTINESTERASE 44 566 - -
Pste1g00981 576 ProSitePatterns Pectinesterase signature 2. 410 419 IPR033131 -
Pste1g00981 576 Pfam Pectinesterase 264 561 IPR000070 GO:0030599|GO:0042545
Pste1g00981 576 NCBIfam pectinesterase inhibitor domain 44 196 IPR006501 GO:0004857
Pste1g00981 576 MobiDBLite consensus disorder prediction 14 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00981 Pste-Chr1 3098961 3103221 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00981 46 576 Carbohydrate Esterase AT3G10720 62.127 0.0 693