Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00975 TTTAGTTTCTCTTAGCAGTCCGCACTCTTTGGTTTGACCCACTTACACTTTAGAGAGAGAGTTCTTTGGCCTTAGTTTCCTTCCCAACTTCCTCACCCTTTCTCTCTCTTTCCTCCCACTTCCCTTCTTCATTTCAATTTCCAATTGCTGTGTTCTTCTGCGCCCAAACACACCACAAGGGATTGCAGTGTTACCATGGAGTTTGTGGGGAAAATCGTTAGAAAAGAGGTTAAGGGGGTTGGGTTTATCTCAGGAACAGTCAAATCCTACGATCCTTCTTCTGGTTTTTTCGAGATCGTCTACGAAGATGGCGATTCTGAGGAGTTGGAGTCCTCTGATGTGACTTCACTTCTGCAATTTCAACCGGAAAGTGCCAAGCCAAAGCCTCGAGTTGGCCGGAAACCTAAGAAGCGCCGCAGAGTAGAGCGCAAATGCGACAGCGGAGCTGGTTCAGGTAATGTTAGCGAGAATTTGACTGTGGAGGCAGTTGATTTTAGGGAGGATTTGGACGAGAATGTTTCTTCTGCTTGTGGTGGCAATTTCGATTTAGGTAGTGGGGGGTTGGAGACAACAGTGGATGAAAGGAATGGAAGGAATAATGCAGGCAACCTTAATGGGACTGTGAAGGAAAACGGGGGTGGAGATAAAATTGATTTTGAAAATAGTTTGAATAAGAGTGTCTCTGCTAATGGTAGTTGTGCCAAGGATGAGCTTGATTTGAATGCTAGGCTTAATATCAATGACGATTTTAATCTTAATGATGCCGGTAGTTTGCCTCTTGACAATGAGGAAAGTTTGAAAAAAAGAAGAGATTGTATTGATTTGAATTTGGATGTGAATAATGAGGATGATGTTGGTCTGAGTGCGGGTTACTTGGGCTGTTCAGAAGGGGAAATGTTGCAACGGGAATGTAATTTTGATTTAAACGTGGAGGTATGTGAAGAAGTTAAGGAAACTCAGTGTGCTGCTGCCGCCGGGGGAAATGGACATTCTGAGGTAGGCGATGCCTTGTTTGATAGGACAGAGCAGCTCCAAAAGGAAGAGATAAATGTTAATAGTTTTGTAGAAGATGGCTGTGTTAATGGCAATTTGAATCATGTATTTGACACAGTCAAATTGGAGGGATTTCATGTTTCTGCAACCCATGTAGCTGAAGATGGTTCTTTGTGTTTGGTTGAGAAAAATGGAGGTTATGATGGCAAAGAGGATGCGGCAACTATTGATTCTCATCAGGTTTCAAATGCAATTTCTGGTAGGGATTCTGATTCTGTGGAGGCTGAGCAAGTTGATTGTCCTTTTGAAGCTGGTGTTGCCATAATTCATCAATACCAAGATGACCCTGTGAGTCCGTGCAAACAAGGAAATAACAGAAGGAAAAGAAGAAAAATATCAGATAATTCAGAAGCCACACCAGAGACAGTTTTAAGGAGGAGTTCTCGTCGGGCATCAGCTAGAAAACGAGTTTCTGGCACTATAGTTGTGGAGGTGAGTGATGATCCTTTGTTGTCGTTGGTAACCAGTGTCTTAACAAAAGAAAAACCTCTAATTGGTGCTGAGAAACACGAGCAATGCAATGATCCTCTTCCGAAGTTGCAATTGCCCCCATCTTCTACAATTTTGAATTTAGACGAAGTTCCTGTTCTTGAACTTTTTTCTATTTATGCCTGTTTAAGATCATTCAGCACTTTGTTATTTTTGAGTCCATTTGAGTTGGAGGAACTTGTAGCTGCACTGAAGTCTGAAATCCCAAGTGTATTATTCGACAGCATTCATGTTTCTATTTTGCAAACTCTAAGAAAGCATTTGGAATACCTTTCCAATGAGGGTTCCCAATCTGCATCCTATTGCCTTAGGAATCTTAACTGGGATTATTTGGACCTGGTCACATGGCCAATTTTCATGGCCGAGTACTTTCTGATTCATGGCTCAGGATTTAAAACTGATTTTGATCTTAAACATCTAATGTTCAGAACTGATTACTACAGACAGCCAGTAATTGTGAAGGTTGCGATTCTTCAGTACCTGTGTGATGATATGATTGAATCAGAAGCCATAAGGTCAGAGCTTAACAGAAGATCTCTGGTAACTGAGACTGATATGGGTTTTGATCAGAATATGTATTTTGACACTTGCAAGAAAAGAAGAGCTGCAATGGATGTGTCTTTTGGCTCTTGCTTGACGGAGGAAAATGTGGATGACACAACTGACTGGAACAGTGATGAGTGTTGTCTGTGCAAGATGGATGGTAATTTAATATGCTGTGATGGTTGTCCTGCAGCATTCCACTCAAGATGTGTGGGAATTGTCAGTGACAATCTGCCTGAAGGTGACTGGTATTGCCCTGAGTGTGGAATGGGCAAACACAGGGCTTGGATGAAATCACGAAGGTCACTTCGCGGAGCAGACTTATTAGGGGTGGATCTGGATGGCCGTCACTATTTTAACAGCTGCGGTTACCTGTTAGTGTCAAACTCATCTGAAGCAGGGTCATTGTTCAATTACTACCACAGAAATGATCTACATGTAGTAATCAAAGCTCTAAAATCTATGGATCCTTTATATGAAGGCATAGTAATGGCTATCTATAAGCATTGGGATATTCGTGCTGACATGAGTGTGGGGGATAGTGTCTTTAATCAAAGTTCCTGCAAGTACATGCAAATGAAGGGAGAATATTCTACCATGCATACATCTTTAGCACCTTTTACTTCAGAGACATGTTTGGACAAGAATCTGGCTAATGATAAAAAAAAGTTGGATGAAAATTCAACTATTGACTGTTGTATGGATGTTGGACAAGAGTTTCCAAAATCTGGAAACCGCTTAGACTCAACGACCACCATAGAAAGTCCTTGTGTTGCTTCTGATGGATCAGCTGATACCACACAGATGAGAAGAGGCATCGACAATGTTCAGATATATGGGCTCAATGATTCCAATAGATGTGATGAATCCTTGAATCATCCTGGTATACCAGGAAAATGCCATCTTGTTGGTGACTGTTCTTTGACATCTTCCAGCTTCGATGTCGGACGTAAAATAAACTTAAGATCTGTAGGTTCTAGCAGTACCCCCTCCACGGACAATAAGGATACTTCAGAAGCACCTTGTGTAATTGACTATGTAAACTACTACAGCTTTGCCCGAACGGCTTCATTTGTTGCACAGGAGTTGATGTGTAAGTCAACTGAAAAGATGAATAAAATTTTTGCAATGTCTGAAGAAGAAGTTATTTCAGATCAAGCAAAGGTCATTATGAAGAAATCTACTAACTTTTATTGGCCAAGTATTCAGAATCTGAATGCAGCTGTGCAAAAAGAAAAATGCGGGTGGTGCTTTACTTGCAAAGTTGCAATTGAAGACAGGGATTGCTTGTTTAATTCTGTGGTGAAGCCTGTTGGGGAAGTGTCGAATGGGACTTTAGTTGGGCCTCAACCCAGGAAGATCCAGAATGGACATCTTAGGGATATCATATGTCTTATCTTCTCTCTTGAGGTTCGATTACGCGGGCTTTTGTTAGGTCCATGGTTGAATGTGCATCAGATTAATCTCTGGCATAAGGATCTTTTGAAGACATCTGATTTTCTTCCTGTTAAACGATTATTGCTTCTCTTAGAATCCAATTTGCGCCCTCTTGCACTTTCAGCAGATTGGTTAAAGCATGTGGATTCTATTGCTACAATGGGATCCGCTACTCATGTTGTTGTCAGTTCGCGCACATCTTCAAAACATGGTATTGGAAAGAAAAGAGCCAGGTATTCAGATGTTGAAACCAATTCTTCTTCAAACACTGCTAGTGGTTTAGGGATGTACTGGTGGAGAGGTGGCAGGCTTTCCCGAAAATTGTTTAATTGCAAGGGTTTGCCTCATTCGTTGATTACAAAGGCTGCTAGACAAGGTGGGTGTAGGAAGATACCTGGCATTTTATATACTGAGAATTCAGATTTTGCACGGAGAAGCAGATTTGTTGCCTGGCGAGCTGCTGTTGAGATGTCAACAAGTGCTGAGCAGCTTGCTTTACAGGTTAGAGAGCTTTTTTCATACATAAGGTGGCATGATATTGAGAACAACCATTCCCTATATGTGCTGGACAAGGAATCTAGAAAATCAGTCAGGCTGTTCAAAAAATCAATTGTACGCAGGAAGTGCACTGAAGAGCAATCTGTCAAATACCTTATTGATTTTGGGAAGAGAAGGGCTATTCCAGATGTTGTTATTAAACATGGTTCTTTGTTGGAACAATCCTCTAGTGAGAGAAAAAAATATTGGCTGGAGGAGTCTTATGTTCCACTGCATCTTTTGAGGAATTTTGAGGAAAAAAGAATTGTCCGCAACTCCACAGATAAGAAACTTGGAAAAATTCTAGAGATTGATAAAGTAAACAAGAAAATTCCTGAACAAAGGGGATTTTCATATTTGTTTACCAGATTGGAAAGGTCTGATTGTCATCAGTGCGGTCACTGCAACAAAGATGTTGCAATGAGGGATGCTGTGAGGTGCCTCCATTGCAAAGGGTATTTCCACAAGAGGCATGTCAGAAAATCAGGTAGCACAACAACTACTGGCAGCACATATTCATGTCACAAATGTCAGGATGGGTTGCTCGCTAAGACTAATACTAATAAAAGGAAAGTTGACTCAAAGCTGCAGAAGGTTCAACAAGAAAAGAAACGTAAGACTGTGCCGTCAGTTTGTAAATCAGTGAATCCGAAGAGCAATAAAAAGGCATTGAGTAAGATACGACAGATGAAATCTCGAAACAGTAAGAATTTCCCATCAAGTGTACCTCTACGCCGTTCTACTAGGAAGGCCAAATCCTTGTATATGCAAAGTCAAATGAATGGACGACGTAAAAAAGGAAAGCCAATTAAAAAAAATGTGGGCCGTAAAAAGGGAAAGCAAGGTAAATCCAAGAAGGTGACCTCTCAGAAGTCCAAGGAAACTACTGATCAATATAAGAAGTTGGCAGTTACTACTGCACGTAAGAACAGAACAAAAATATGTAACAGTTATTGGCTTAATGGTCTTCAGTTGTCTAGAAAGCCAAATGATGAACGTATAGTGCTGTTTAAAGAGAAGAAGTTTGTTGTATCCTCGGAAGATATTTCTGGCTCTATTGATTATCCTAAATGCCGCCTTTGTTGTGGAAATGAATGCACCTTGAATTATATTGCATGTGAAACCTGTGGAGATTGGTTTCATGGTGATGCTTTTGGGCTCAATGTGGATAATGCCAGACAACTTATTGGATTTAAGTGTCATGTTTGTCTTGATAGAACTGCTCCAATCTGTCCCCATATGAAGATTAATGTATTGTCATGCACTGAAAGCAATGCTGCAATTGAGTGTGCAGAGGAATTATCTAATCGTGTTTCTCTCCAACCTTTAAGTGAGGTTTGATTATTTGTATTGAAATGACATGGCGGGACATCACATGCCAGCTTCTTGTAGGGTTTTTTCTTCCTACAGGGTTTGGTGGCAAATGACTTTTTTGTTTATAAAAGAAAATTGTCGTTAGACAGGTTTACTATATAGGAGGAATGATTGCTTGATCAGGCTTCTGCTCTGCTGCCTTCTATTTCAACTGTCCATGAAAGGGAAAGTAGAATAGTGAAACAAGCATGCTTAGCTCAAAAGGCTGAAGATTACTGTAATCAGAACATAGTAGAGTTCATAGTCATACATCAATTGCATTCATGATTGGCATTCTAACCATCGGCATTCGTTGTAGCATTCTTTAATGTAGGGCCTTTTCTTCTTCACTAGAATTGATTTCACTGAGGTCTTGTCAAACATTTTCAAAGGAATGGAGTATATAATTCATAGCAAATCTCAGTAACGATAATATTGATCTCCGCTAGTTAATAGAATCTAGCTCTGTAAGAGATGTTTCTCCTGCTTTTGCTTGGTGAAAACCGAAGCATGGGAAAATGGGGCATTTCTTGTGATGTCATTAACCAGTTAGAAGTTATTTTCGTTTCCTTGTTCATCCGAGTTCCAAAGTGTATACTTGCATCAGTTTAACATGCTGATTTCAAGGTGCCATTTTAACCATCCAGTAATGTAATTATTTCTTCGTTTTGTGCATTGGAATGTGAAAACAGATATTTGAGGCCTCCACAAAGGCAATTCAAGCA 6137 0.4033 MEFVGKIVRKEVKGVGFISGTVKSYDPSSGFFEIVYEDGDSEELESSDVTSLLQFQPESAKPKPRVGRKPKKRRRVERKCDSGAGSGNVSENLTVEAVDFREDLDENVSSACGGNFDLGSGGLETTVDERNGRNNAGNLNGTVKENGGGDKIDFENSLNKSVSANGSCAKDELDLNARLNINDDFNLNDAGSLPLDNEESLKKRRDCIDLNLDVNNEDDVGLSAGYLGCSEGEMLQRECNFDLNVEVCEEVKETQCAAAAGGNGHSEVGDALFDRTEQLQKEEINVNSFVEDGCVNGNLNHVFDTVKLEGFHVSATHVAEDGSLCLVEKNGGYDGKEDAATIDSHQVSNAISGRDSDSVEAEQVDCPFEAGVAIIHQYQDDPVSPCKQGNNRRKRRKISDNSEATPETVLRRSSRRASARKRVSGTIVVEVSDDPLLSLVTSVLTKEKPLIGAEKHEQCNDPLPKLQLPPSSTILNLDEVPVLELFSIYACLRSFSTLLFLSPFELEELVAALKSEIPSVLFDSIHVSILQTLRKHLEYLSNEGSQSASYCLRNLNWDYLDLVTWPIFMAEYFLIHGSGFKTDFDLKHLMFRTDYYRQPVIVKVAILQYLCDDMIESEAIRSELNRRSLVTETDMGFDQNMYFDTCKKRRAAMDVSFGSCLTEENVDDTTDWNSDECCLCKMDGNLICCDGCPAAFHSRCVGIVSDNLPEGDWYCPECGMGKHRAWMKSRRSLRGADLLGVDLDGRHYFNSCGYLLVSNSSEAGSLFNYYHRNDLHVVIKALKSMDPLYEGIVMAIYKHWDIRADMSVGDSVFNQSSCKYMQMKGEYSTMHTSLAPFTSETCLDKNLANDKKKLDENSTIDCCMDVGQEFPKSGNRLDSTTTIESPCVASDGSADTTQMRRGIDNVQIYGLNDSNRCDESLNHPGIPGKCHLVGDCSLTSSSFDVGRKINLRSVGSSSTPSTDNKDTSEAPCVIDYVNYYSFARTASFVAQELMCKSTEKMNKIFAMSEEEVISDQAKVIMKKSTNFYWPSIQNLNAAVQKEKCGWCFTCKVAIEDRDCLFNSVVKPVGEVSNGTLVGPQPRKIQNGHLRDIICLIFSLEVRLRGLLLGPWLNVHQINLWHKDLLKTSDFLPVKRLLLLLESNLRPLALSADWLKHVDSIATMGSATHVVVSSRTSSKHGIGKKRARYSDVETNSSSNTASGLGMYWWRGGRLSRKLFNCKGLPHSLITKAARQGGCRKIPGILYTENSDFARRSRFVAWRAAVEMSTSAEQLALQVRELFSYIRWHDIENNHSLYVLDKESRKSVRLFKKSIVRRKCTEEQSVKYLIDFGKRRAIPDVVIKHGSLLEQSSSERKKYWLEESYVPLHLLRNFEEKRIVRNSTDKKLGKILEIDKVNKKIPEQRGFSYLFTRLERSDCHQCGHCNKDVAMRDAVRCLHCKGYFHKRHVRKSGSTTTTGSTYSCHKCQDGLLAKTNTNKRKVDSKLQKVQQEKKRKTVPSVCKSVNPKSNKKALSKIRQMKSRNSKNFPSSVPLRRSTRKAKSLYMQSQMNGRRKKGKPIKKNVGRKKGKQGKSKKVTSQKSKETTDQYKKLAVTTARKNRTKICNSYWLNGLQLSRKPNDERIVLFKEKKFVVSSEDISGSIDYPKCRLCCGNECTLNYIACETCGDWFHGDAFGLNVDNARQLIGFKCHVCLDRTAPICPHMKINVLSCTESNAAIECAEELSNRVSLQPLSEV 1734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00975 1734 SUPERFAMILY FYVE/PHD zinc finger 662 727 IPR011011 -
Pste1g00975 1734 Pfam PHD-finger 677 718 IPR019787 -
Pste1g00975 1734 Pfam DDT domain 483 535 IPR018501 -
Pste1g00975 1734 SMART testlast3 479 539 IPR018501 -
Pste1g00975 1734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 662 737 IPR013083 -
Pste1g00975 1734 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1639 1698 IPR013083 -
Pste1g00975 1734 ProSiteProfiles Zinc finger PHD-type profile. 674 721 IPR019787 -
Pste1g00975 1734 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 603 625 IPR028942 -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 129 150 - -
Pste1g00975 1734 SUPERFAMILY FYVE/PHD zinc finger 1634 1694 IPR011011 -
Pste1g00975 1734 SMART PHD_3 676 719 IPR001965 -
Pste1g00975 1734 SMART PHD_3 1645 1692 IPR001965 -
Pste1g00975 1734 SMART PHD_3 1419 1466 IPR001965 -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 381 417 - -
Pste1g00975 1734 CDD PHD1_AIRE 676 718 - -
Pste1g00975 1734 ProSitePatterns Zinc finger PHD-type signature. 677 718 IPR019786 -
Pste1g00975 1734 ProSiteProfiles DDT domain profile. 479 539 IPR018501 -
Pste1g00975 1734 CDD Tudor_AtPTM-like 4 54 IPR047365 -
Pste1g00975 1734 PANTHER PHD FINGER FAMILY PROTEIN 2 1697 - -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 1485 1586 - -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 1552 1574 - -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 46 88 - -
Pste1g00975 1734 MobiDBLite consensus disorder prediction 1518 1548 - -
Pste1g00975 1734 Coils Coil 1470 1490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00975 Pste-Chr1 3077807 3094407 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00975 1 1703 PHD Transcription Factor Family AT5G12400 40.621 0.0 1098
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Pste1g00975 DDT 1.5e-10 No_clan