Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00968 TCCTACTTGTTTAGAACTGCCACTTCACTAGATAGTTTAGCAGTCAGTCACTCAATCCAAGATGGTGAGAGTTTGGTTTCAGCAGGTAGAATTACTGAACTGGCTTTCTTTAGCCCAGGAAATTCAACAAAACGGTACTTGGGTATATGGTTCAGAAATGTGTCCCCTATAACTCTAGTGTGGGTGGCTAATAGAAATACACCTCTTGAGAATAAATTAGGAGTTCTCAAACTCAATGAAAAAGGAATTCTGAAGCTTCTCAAGGCTACAAACAACACCTGGTTTAATGCTCTAGTTGACTTGAGGAAATTCTCTAAACAAGGACAAGACTTGTATATCAGAGTCACTTATTCAGAATTAGCCTATTATGAACAAGAAAAGAAGAAAACATTTAGGCATATTATGTGTATGTGTTTAAACACTGATATGATATTATCTTCCGAGGAAACAGGGGCAGCAAGAAAGTTTTACCGCAAGCATTACAAAATTAAACAGAGAAAGGAAGATGTTGATTTGACAACTTTCAATTTGGCGGTCATAGCTAATGCTACTGAAAACTTTTCAACCAGAAACAAACTTGGGGAAGGTGGCTTTGGACCTGTATACAAGGTAATAATATATAAGAAAGATATCCAAAATTTTTATTTTCCTTTAAAACTTTCTAACTTTTTAGCAAATGTTTGTTTTCAGGGCACACTGATAAATGGACAAGAGTTAGCTAATGAAGTAGCCTTGATAGCAAAACTTCAGCACCGTAACCTTGTAAAGCTTCTGGGGTGTTGCATTGAACGTGAAGAAAAGATGTTAATTTATGAATACATGTCCAACAAAAGCTTGGATTACTTTGTTTTTGATGAAACCAAAAGGAAGTTGCTAGATTGGAATAAGCGTTTCAACATTGTTAGTGGTATTGCTCGAGGACTCATGTATCTTCATGAAGATTCTAGGTTGAGGATTATTCACAGAGATCTAAAACCCAGTAACATTTTACTGGACGCAAATTTGAATCCCAAAATAGCAGACTTTGGCTTGGCTAGATCATTTTTGGAAGACCAAGTTGAGGAAAACACAAATAGGATGGCAGGAACATATGGTTATATGTCTCCTGAGTATGCGGCTTGTGGGAGTTTCTCAGTAAAATCAGATGTATTTAGTTACGGTGTGATAGTACTAGAGACTACTGAAGAGAGGGCACCTGAACTACTGGATGAGTTGTTGGGAGAACAATACTCACCCTCTGAAGTCACACGATGCATACAGGTCTATTATGTGTACAACAAAGACCTAAATATAGACCAGTCATCAGTTGTTTTAATGTTGAATGGAGAAAAATCATTGCCAAAGCCAAAGGATCCTGGATTTTACACTGAAGCAGATATTAATTCTAAAGCAAACTCTTCGCTGGAAAATAACATTTTATTCTCAGTTAATGAGCTTTCCATCACAGTATTGGATGCAAGA 1461 0.3676 SYLFRTATSLDSLAVSHSIQDGESLVSAGRITELAFFSPGNSTKRYLGIWFRNVSPITLVWVANRNTPLENKLGVLKLNEKGILKLLKATNNTWFNALVDLRKFSKQGQDLYIRVTYSELAYYEQEKKKTFRHIMCMCLNTDMILSSEETGAARKFYRKHYKIKQRKEDVDLTTFNLAVIANATENFSTRNKLGEGGFGPVYKVIIYKKDIQNFYFPLKLSNFLANVCFQGTLINGQELANEVALIAKLQHRNLVKLLGCCIEREEKMLIYEYMSNKSLDYFVFDETKRKLLDWNKRFNIVSGIARGLMYLHEDSRLRIIHRDLKPSNILLDANLNPKIADFGLARSFLEDQVEENTNRMAGTYGYMSPEYAACGSFSVKSDVFSYGVIVLETTEERAPELLDELLGEQYSPSEVTRCIQVYYVYNKDLNIDQSSVVLMLNGEKSLPKPKDPGFYTEADINSKANSSLENNILFSVNELSITVLDAR 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00968 487 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 109 461 - -
Pste1g00968 487 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 274 365 - -
Pste1g00968 487 SMART blect_4 16 134 IPR001480 -
Pste1g00968 487 Pfam Protein kinase domain 188 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00968 487 Gene3D - 6 109 IPR036426 -
Pste1g00968 487 Gene3D Phosphorylase Kinase; domain 1 147 273 - -
Pste1g00968 487 Gene3D Transferase(Phosphotransferase) domain 1 274 435 - -
Pste1g00968 487 Pfam Domain of unknown function (DUF3403) 445 487 IPR021820 GO:0004674
Pste1g00968 487 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Pste1g00968 487 ProSiteProfiles Bulb-type lectin domain profile. 10 135 IPR001480 -
Pste1g00968 487 SUPERFAMILY alpha-D-mannose-specific plant lectins 42 97 IPR036426 -
Pste1g00968 487 SMART serkin_6 187 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste1g00968 487 SUPERFAMILY Protein kinase-like (PK-like) 173 400 IPR011009 -
Pste1g00968 487 ProSiteProfiles Protein kinase domain profile. 187 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00968 Pste-Chr1 3047163 3049490 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00968 158 458 Receptor kinase-like Gene Family AT4G23190 45.376 6.96e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste1g00968 Pkinase 1.2e-39 CL0016