Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00961 TAACTGTATATAAAAGACACCAAGAGCCCTCTCTCTCTTTCTTCTCGTTTTTTGCTCCCTGTTTTGGCGTTCCATGCTGTTATCTATTATTGTCTAATGGCTTCTCTATCGGTGTTCCTGCAACTAGTGCTTGTGGTTTACACTTGCATATTCCATGCAGCAACAGTGACATGCACACACCACCACGACGATAATACTATGAACATAGTATTATCTTCCACCAACTCCTCGAAGAATAAGCACCACTGGATAGGACCCGTGGGTCACCGTAAAATCACCGTTGACATTAACGGCGGTGGCCACTACCGGTCCGTGCAAGACGCCGTGAACGCCGTCCCAGACAACAACAGAAGGAATATCCTTATTCAAATAGGTGCTGGATGCTACAGAGAAAAGGTGGTGGTGCCCGTGACGAAGCCGTACATAACGTTTAAGGGCGCGGGTAAGGAAGTGACGGTAATAGAATGGCACGATCGAGCCAGTGACCCTGGTCCCAGCGGACAGCAACTTCGTACTTACAGAACCGCTTCTGTTACTAACACAGCGCCTGCACCAATGCCGGGGATGCAGGGGTGGCAAGCGGTGGCGTTTCGTATATCAGGCGATAAAGCATACTTCTCCGGCTGTGGCTTCTACGGTGCACAAGACACACTATGCGACGATGCTGGAAGACATTACTTCAAGGAATGTTACATCGAAGGATCCATCGATTTCATTTTTGGGAATGGAAGGTCCATCTACAAGGATTGCGAGCTACACTCAATAGCAACAAGGTTTGGTTCGATAGCAGCACAGGATAGGCAACATCCAGAAGAGAAGACAGGGTTTGCTTTCGTACGGTGCAAGGTCACGGGCACGGGTCCGTTATATGTGGGCCGAGCAATGGGTCAGTACTCTACAATTGTCTACTCTTACACATATTTCGATGATATAGTTGCACATGGCGGTTGGGATGATTGGGACCACGCCGACAATAAGAACAAGACTGTATTCTTCGGAGTGTACAAATGTTGGGGACCAGGAGCAGAGGCAGTACGTGGGGTGTCATGGGCAAGAGACTTGGATTTCGAATCTGCTCATCCGTTTATCAGAAAGAGTTTCGTCAATGGCAAACACTGGATCTCGCCATCTGATGTTTAGTCCTCACTTTTTGGTTAACACTCACCCTTAATTTACTTGCTTGCACACTAAACTCCAAAACAATTGTCCTATCCTTCATTCATTTATTTGTTTTTGTCAATATATGAATTCATTTACTCTCTTTGTAGAATGGCTTTCCTTCTTATTTATTTATTGAATATACTTTTATGACCTCCAAAAATGTAGTAGATAAATCAATTATATAATGGC 1350 0.4533 MASLSVFLQLVLVVYTCIFHAATVTCTHHHDDNTMNIVLSSTNSSKNKHHWIGPVGHRKITVDINGGGHYRSVQDAVNAVPDNNRRNILIQIGAGCYREKVVVPVTKPYITFKGAGKEVTVIEWHDRASDPGPSGQQLRTYRTASVTNTAPAPMPGMQGWQAVAFRISGDKAYFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSIYKDCELHSIATRFGSIAAQDRQHPEEKTGFAFVRCKVTGTGPLYVGRAMGQYSTIVYSYTYFDDIVAHGGWDDWDHADNKNKTVFFGVYKCWGPGAEAVRGVSWARDLDFESAHPFIRKSFVNGKHWISPSDV 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00961 347 Pfam Pectinesterase 60 338 IPR000070 GO:0030599|GO:0042545
Pste1g00961 347 SUPERFAMILY Pectin lyase-like 57 345 IPR011050 -
Pste1g00961 347 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 56 343 - -
Pste1g00961 347 ProSitePatterns Pectinesterase signature 2. 200 209 IPR033131 -
Pste1g00961 347 FunFam Pectinesterase 55 344 - -
Pste1g00961 347 Gene3D - 57 347 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00961 Pste-Chr1 3023172 3025882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00961 1 347 Carbohydrate Esterase AT5G47500 68.219 0.0 511