Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00946 ACGCTGGTCAACAGAGAGAAGGTGGAGGTTTGTGGCGTGAGTGAGTAGTAGAGTGTGTGTGACTCGGAAAGACTAATTTTACAGTTAGATTTTGATGTTTGATTGGAAGGATGGGTGACGTAAGCTAAAAACCCTTAAACGTTAAACCCTTTCCCTTCCAAACCCTGAATTCGTTTTTGAAAAACCCTAATCTCTTGGGTTCCAAAATTTCCACCTCAATGGAGGAGCAGAATGAATCACAAGATAAGAAAGAACTCTATGCACTCTTGAACTTGTCTCCCGAAGCTTCTGATGAAGAAATTCGCAGAGCGTATCGACAATGGGCGCAAGCCTATCATCCAGATAAATACCAAGCTCCTCACATGAAGGATATTGCTACGGAGAACTTTCAGCGAATATGTCAAGCTTATGAGATTCTGTCAGATCCAAATAAAAGGCAAATATATGATATCTACGGCATGGAAGGGTTGACCTCTGGTTTAGAACTTGGCCCGAAGCTTAATGGAGTTCAAGAGATAAAGGAAGAGCTCGAGAGACTGAAGAGGATGAAGGAACGGGAAAAAATGGTGGCGCAATTTCGACCCTCTGGTACAATTCTGGCCAATATGTCTTTGCCACGCTATCTAAATGGTGATGGCCTCCTCGAAGGAATGGCTATGACAAGTGAAATCCAGTCTCGGTTATCAAAGCGTAATGCTGTTACAATTGGTGGTAATTTAGCAGTGAATGGAGATGAAGGTGGTGGAGCTGCTACTGCTGTATTTAGGCATCAACTTTCAGAAGTTTCATCGCTAGAGTTTGTGGCTTCAACTGGTCTCCAGTCACTAATTGGGATGCATACAACACGTAATCTATCATCACACTCAGCTGCAACAATGGGGTTAGCTATGTCTCTGAGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAACTTTCAGAAACAGCAAATGGACATATAGAGCTTACTTTGGGACCACAATCATCTATAACTGTTGGATGGCAGAAGAAAGATCAGAAAAGATCAGCCTCTGGAGAAGTGAAGTTTGGCACAGGTTCTTTTCAGACATCAGTTCATTATACTCATCGATTTTCTCCTAAATCTCTTGGCTGTATTGAGGGAAGAGTTGGGAGTTCTTCCCTTGAGATTGAAGTTGGTGGTGGGAGGAAGTTATCTAAATTCAGCTCGGTACGCTGGTTGTATATAATAGGAATTCGGGTAATGTAGGTATTTCCTGGAAATTTGAACTCTACCGTGGGGTCAGAAGTTAATTATTCCTGTAAGGAAACTCTTGGTTCTTTACTTATTTTGCTGACAAGGCATCTGAACCCTGTGTTTGTTACTGGAGCGTTTGTCATTCCTGCATCTCTTTACTTTTTTCTAAAGAAATTTTTTATTAAACCTTATTACCTTAAAAGGAATAAGCAGAAAGCCCTGGAGGAGGAAGAGAAAAATTCTGCTCAGGTTAAGGAAGCAAGGGCTGCAGCTGAGAAAGCTCAGAAATTACAAGAAAATGTGGCTAATAGGAAAAGAAACAGGCAATTAGAAACAGGTGGACTTGTTATTATGAGAGCACTATATGGAAATCAAATAATTTTGAACAACTTAAAGTCATCCAGTGAAACAAGTCTTGAATCAACTTCTGACGTCGTTGATGTTACAATACCTCTGAATTTTCTAGTTAATGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGTTTCTGTGATCCGTGTCCAGGAAAACCTAAAGAGTTGTATGTAGAGTACGCTTATTCTGGCAATCAATACAAGGTTTGGGTTGGCGATTATGAAGAATTACAGATCCCTCAGGCCAGACACAGGATATAAACGATTATTATTAACACATCAATGTACCATTGTAACCTCTTGCAGTTTTTCCTGGTTTACATGCTTGAGGTACAACATTTATCATGTCAGACGGAATTAGAAGAGGTACCTTTTACAATTTTTTGGCCAGTGGTGCCGTCTCTTAATTTTTTAAATCTTTTATTTTTCTCACACCCCCAAAATGTATGAAATAAAGACATTTTAGGAGGTGATTATATATCCTGTCGTGGTTGCAATCCTTCGATTGTGGATTCGTTCCCCATTCACACACAAAATCCTGTCGGGGCAGTAGGAGTTTTGATATGTCTGTAGTCTGTATTATCAAATTTTCATCTGGCCATTTGCGTTTGTATTTTAGAAGATGATACACTATTTATGACAAACATCCGGGAATAAAATTGAACGCCGAA 2284 0.3997 MEEQNESQDKKELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATENFQRICQAYEILSDPNKRQIYDIYGMEGLTSGLELGPKLNGVQEIKEELERLKRMKEREKMVAQFRPSGTILANMSLPRYLNGDGLLEGMAMTSEIQSRLSKRNAVTIGGNLAVNGDEGGGAATAVFRHQLSEVSSLEFVASTGLQSLIGMHTTRNLSSHSAATMGLAMSLRDGSLNLSNLWTRQLSETANGHIELTLGPQSSITVGWQKKDQKRSASGEVKFGTGSFQTSVHYTHRFSPKSLGCIEGRVGSSSLEIEVGGGRKLSKFSSVRWLYIIGIRVM 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00946 337 Coils Coil 94 117 - -
Pste1g00946 337 PANTHER CHAPERONE PROTEIN DNAJ 13 1 335 IPR042162 -
Pste1g00946 337 Pfam DnaJ domain 13 77 IPR001623 -
Pste1g00946 337 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Pste1g00946 337 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Pste1g00946 337 CDD DnaJ 12 69 IPR001623 -
Pste1g00946 337 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pste1g00946 337 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pste1g00946 337 PRINTS DnaJ domain signature 52 72 IPR001623 -
Pste1g00946 337 PRINTS DnaJ domain signature 72 91 IPR001623 -
Pste1g00946 337 Gene3D DnaJ domain 1 90 IPR036869 -
Pste1g00946 337 SMART dnaj_3 11 72 IPR001623 -
Pste1g00946 337 SUPERFAMILY Chaperone J-domain 9 89 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00946 Pste-Chr1 2961677 2974689 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00946 14 79 C2H2 Transcription Factor Family AT1G74250 44.118 8.71e-09 55.1