Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00938 TGTGAAGGCCAAGAAATTGAGGCTTTGCCTCCTGCTGCAGAAACTTGTAATGGGGTTTTCATTTCCTACGACTTTCTCAACCGTAGGAAAGAGTTCCCTCATGTGAAGAATGCCACAGCACAGTCTTGGGCCTTCAATGCCACAGCAACAGTTCTCAACACTGGAAAAGATGTTGTTAAAGCGTGGAGATTGTTCATAGGGTTTCAACATGATGAGATTCTGATATCTACCAGTGGAGGTAATCTATTAGATGGAAGTGATTTTCCTGCCCCAGTAGGAAATGGCTCTACCTTTGTTGGATCTTCAGTGCCAGATTTGGATAGCTCAATCAACACAGCTCAAGATTTCACACAAATTGCTGCGATCATTCAGATTCTTGGCACCCAATTTGGAGTAAAACCTCCTACAATTCCTATGCCTAAATCCATAAAGTTGGTAAATGATGGTTACAGGTGTCCCCAACCTACTACCCGCAAGGGTTCCATGTATGCATGCTGTAAAAAAGACCCTAAATTCAAGGCTATAATAAAGAAGACAAAATTCTACCCACGACAAAAAGGGGATATTGCCATATTGTATGACGTTTCTCAAGTGTATGAGAGTAGTTACATGGTTGAGGTGACTATGGAAAACAATCATCTTCTGGGAAGGCTTGATCATTGGAACTTAACATGGGAGTGGACAAGAGGGGAATTTATATACAGTATGAAAGGTGCTTTCACACGTGAGATAGACTACTCAAGTTGCATCTATGGTCCTGCAGGGAAGTATTACAAGGACATGGATTTCTCCAAAGTGGTTAACTGTCAAAAGAATCCAGTACTAAGTGACTTGCCTCCAGAGAAATACAATGACACTGAACTTGGAAAGATACCTTACTGTTGCAAAAATGGATCTATTTTACCAATCCATATGGATCCAAGCAAATCCAAGTCTGTTTTTCAAATGCAAGTGTTCAAAGTACCACCTGATTTAAACAAAACAGCAATTTTCCCTCCCGATAAATGGAAAATTGTGGGCATTCTGAACCCAGAATACAGATGTGGTTCACCTATAAGAGTGGAACCTTCAAGGCAACAAGACCCTAGAGGACTCGAAGCTACAGTTATTGCCACTGCAACTTGGCAAATACTATGCAATATCACTAAGCCAACAAAGAGGAGCTCTCGTTGTTGTGTTTCTTTTTCTGCTTATTACAATGATTCTGTGATACCTTGCAACACATGTGCCTGTGGTTGTGAAAATGTTAATACAAGAAAATGTAACCCCAAATCACAAGCAATGCTTCTCCCTCCAGAGGCTCTTCTTGTACCCTATGAGAATAGGACAAGAAAGACAGTTGCTTGGGCCAAACTAAAGCATTTTAATGTCCCCACAAAATTGCCATGTGGTGACAATTGTGGAGTTAGCATTAATTGGCATGTAGTTTCGGACTTCAAAGGTGGGTGGAGTGCTAGAATCACTTTGTTCAATTGGAAGCTTAGTAATTTTGAGGATTGGTTCACTGCACTCCAATTCAAGAGAGCTTCTCTTGGTTATGAAAAAGTGTATTCTTTTAATGGAACATTTCTTCCAAAGCTTAATCGAACCATTTTCTTGCAAGGGTTTCAAGGATCAAACTTTTTGATAGGGTTAGACAATGGAACAAACCCAAAGGTGCCAGGAAAACAACAATCTGTTATTTCCTTTACTAAGAAGTATACACCAGGCATCAAAATTGCAAAAGGAGATGGGTTTCCTTCAAAGGTCTTTTTCAATGGTGAAGAGTGTTCTCTTCCTACAAGATTCCCTGTGAAAAGTGGAAACCAACGTAATGTAGATTTAATATACCAGCTGTTAGTTTTAGTTTTAGCTTTTACAATGAGTCAAATGTTGTATTGA 1881 0.3977 CEGQEIEALPPAAETCNGVFISYDFLNRRKEFPHVKNATAQSWAFNATATVLNTGKDVVKAWRLFIGFQHDEILISTSGGNLLDGSDFPAPVGNGSTFVGSSVPDLDSSINTAQDFTQIAAIIQILGTQFGVKPPTIPMPKSIKLVNDGYRCPQPTTRKGSMYACCKKDPKFKAIIKKTKFYPRQKGDIAILYDVSQVYESSYMVEVTMENNHLLGRLDHWNLTWEWTRGEFIYSMKGAFTREIDYSSCIYGPAGKYYKDMDFSKVVNCQKNPVLSDLPPEKYNDTELGKIPYCCKNGSILPIHMDPSKSKSVFQMQVFKVPPDLNKTAIFPPDKWKIVGILNPEYRCGSPIRVEPSRQQDPRGLEATVIATATWQILCNITKPTKRSSRCCVSFSAYYNDSVIPCNTCACGCENVNTRKCNPKSQAMLLPPEALLVPYENRTRKTVAWAKLKHFNVPTKLPCGDNCGVSINWHVVSDFKGGWSARITLFNWKLSNFEDWFTALQFKRASLGYEKVYSFNGTFLPKLNRTIFLQGFQGSNFLIGLDNGTNPKVPGKQQSVISFTKKYTPGIKIAKGDGFPSKVFFNGEECSLPTRFPVKSGNQRNVDLIYQLLVLVLAFTMSQMLY 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00938 626 Pfam COBRA-like protein 203 382 IPR006918 GO:0010215|GO:0016020
Pste1g00938 626 PANTHER COBRA-LIKE PROTEIN 7 7 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00938 Pste-Chr1 2940269 2942764 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00938 2 619 COBRA Gene Family AT4G27110 55.680 0.0 752
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g00938 1 2940269 2942764 Pste1g00938 1 2940269 2942764 ECH