Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste1g00934 | ATGGGTAGGTCTCCATGTTGTGAAGAGAGTAGCGGTGTAAAGAAAGGGCCATGGACACCCGAAGAAGACGAGAAGCTGATTGATTATATGAGCAAACACGGCCATGGAAGTTGGAGAACATTTCCAAAGCGTGCAGGTCTCAATAGGTGTGGTAAGAGCTGCAGATTAAGGTGGACAAACTATCTGAGGCCTGATATCAAGAGAGGCAAATTCACTGAAGAAGATGAGAGAGTTATCATCAATCTTCATTCAGTTCTCGGAAACAAGTGGTCGAAGATTGCAGCTCATCTGCCAGGACGAACTGATAATGAGATAAAGAATTATTGGAACACTCACATAAGGAAAAAGCTTCTCAAGATGGGTATTGATCCAGAAACTCACAAGCCAAGGACAGACTTGAATCACCTCCTGAGTCTTACTCAGTTGCTTGGCATGTCAAACTTGAGCAGTGCTATGAGTACTACTTGGGGCAATAACCCTCTAGGCTCACAAACAGATATCACTCAGCTAGCTAAAATTCAACTTCTGCAAAATCTGTTACAAATTATGAACAGCAATTCATTTGTTAACATGGGAAACCCTTACCTCTTAGGAAATCCTAACCTCAACCCTTTGTTTCTCAATGGAACCAACCCCCTCCAAACCAAGGAGCCTGTGGTGTTGAGTGGTGGAGAAGAATATGCTAACCCTGGTGTATACTCTCAAACACAAAGTGAGTGCTCTCAACCGGATGTTTCAAAATCATGGGCAGATTTAGAGGGTGGATCTAATCCACCAGATGGTGAGTACAACAAAATTAGCAGCAGTACAAATTCACGTGAAAATCAAGCTGAAAACCCACTTCCTGCATTAGTTACGTCTTCTCCAAGGATGGGAACGTTCAACCAAATGGATAGTGGTTGTAACATAGCTCAATCGTCAACAGAGTCACCTTCCAACACATTCTTTGATGATTGGGAGAAGTTGCTTGACGATGAAACAAGCGGTTCTTATTGGAAAGAGATTCTAGACTTGACATCCACTTCGGCGTCACCAATTGTGTGGTAGAAGACTGATTGATTCCCTATTAGGATGCAGGTCCCATCAACTCATGGATATATATCATGTGTACCAAAGAAATACGCAGTTTTATTCATTCATGGTTTTAATTCCTTGTTCAGATTCATTTGTATTTTTATACAAGCGCACAAAACATATATAAAAGCTACACTCGTACATGCATATTTATATACGGAGAGTCGTTTCATATATATATTTAGTTTTATGGCATCTTAGAAATGAACTTTGTAC | 1290 | 0.4078 | MGRSPCCEESSGVKKGPWTPEEDEKLIDYMSKHGHGSWRTFPKRAGLNRCGKSCRLRWTNYLRPDIKRGKFTEEDERVIINLHSVLGNKWSKIAAHLPGRTDNEIKNYWNTHIRKKLLKMGIDPETHKPRTDLNHLLSLTQLLGMSNLSSAMSTTWGNNPLGSQTDITQLAKIQLLQNLLQIMNSNSFVNMGNPYLLGNPNLNPLFLNGTNPLQTKEPVVLSGGEEYANPGVYSQTQSECSQPDVSKSWADLEGGSNPPDGEYNKISSSTNSRENQAENPLPALVTSSPRMGTFNQMDSGCNIAQSSTESPSNTFFDDWEKLLDDETSGSYWKEILDLTSTSASPIVW | 348 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste1g00934 | 348 | ProSiteProfiles | Myb-like domain profile. | 63 | 113 | IPR001005 | - | |
| Pste1g00934 | 348 | FunFam | MYB-related transcription factor | 14 | 67 | - | - | |
| Pste1g00934 | 348 | SUPERFAMILY | Homeodomain-like | 12 | 109 | IPR009057 | - | |
| Pste1g00934 | 348 | Gene3D | - | 14 | 67 | - | - | |
| Pste1g00934 | 348 | MobiDBLite | consensus disorder prediction | 226 | 284 | - | - | |
| Pste1g00934 | 348 | MobiDBLite | consensus disorder prediction | 261 | 284 | - | - | |
| Pste1g00934 | 348 | Pfam | Myb-like DNA-binding domain | 15 | 62 | IPR001005 | - | |
| Pste1g00934 | 348 | Pfam | Myb-like DNA-binding domain | 68 | 112 | IPR001005 | - | |
| Pste1g00934 | 348 | MobiDBLite | consensus disorder prediction | 229 | 245 | - | - | |
| Pste1g00934 | 348 | FunFam | Transcription factor MYB39 | 70 | 131 | - | - | |
| Pste1g00934 | 348 | Gene3D | - | 69 | 135 | - | - | |
| Pste1g00934 | 348 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 10 | 62 | IPR017930 | - | |
| Pste1g00934 | 348 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 63 | 117 | IPR017930 | - | |
| Pste1g00934 | 348 | ProSiteProfiles | Myb-like domain profile. | 10 | 62 | IPR001005 | - | |
| Pste1g00934 | 348 | SMART | sant | 67 | 115 | IPR001005 | - | |
| Pste1g00934 | 348 | SMART | sant | 14 | 64 | IPR001005 | - | |
| Pste1g00934 | 348 | CDD | SANT | 70 | 113 | IPR001005 | - | |
| Pste1g00934 | 348 | CDD | SANT | 17 | 62 | IPR001005 | - | |
| Pste1g00934 | 348 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR | 1 | 295 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste1g00934 | Pste-Chr1 | 2925095 | 2927498 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste1g00934 | 1 | 337 | MYB Transcription Factor Family | AT5G16770 | 47.278 | 3.30e-95 | 284 |
Transcription factors information