Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00927 GTGAGGGTGAGTGTTTGATAAACCCTGATTCGTGGCAAAAGAAGCAGGTGAGCGGCGGCTGTGACATGGAGGACGTTTGCGAAGGAAAGGACTTCACGTTCTCGAAGCAGGAAGAGAAGATTCTGGACTTGTGGTCTGAAATCGACGCATTCCACACTCAGCTATCCCTCACCAAAGACAAACCCGAATACATCTTCTACGATGGCCCTCCCTTCGCCACCGGCCTCCCTCACTACGGCCACATCCTCGCCGGCACCATCAAGGACATTGTCACGCGCTACCATTCCATGACCGGCCACCACGTCACGCGCCGCTTCGGCTGGGACTGCCACGGCCTCCCCGTCGAAAACGAGATCGACAAGAAGCTCGGCATCAAGAAGCGCGAGGACGTCCTCAAGCTCGGAATCGACAAGTACAACGAGGAATGCCGCAGCATCGTCACTCGCTACGTCTCCGAGTGGGAGTCCGTTATCACCCGCACCGGCCGTTGGATCGACTTCAAAAACGATTACAAGACTATGGACCTCAACTTCATGGAGTCTGTTTGGTGGGTTTTCTCCCAGTTATACGCCAAAAACCTTGTCTATAAAGGTTTCAAGGTCATGCCCTATAGCACTGGCTGCAAAACTCCGCTCTCCAATTTCGAGGCCGGTCAGAATTATAAGGATGTATCTGATCCTGAAGTATTCATGACGTTTCCACTTGTGGGCGATCCACATGGTGCATCTTTTGTGGCATGGACAACGACTCCATGGACTCTTCCAAGCAATCTTGCTCTCTGCATCAATGCTAATTTTACCTATGTGAAGGTTCTCAATAAGTACTCTGGTAAAGTTTATATTGTTGCTGAATCTCGGCTATCTGCAATCCACAACCCTAAGGAGAAGGCCAAAGAAACTGTTGTTAATAGTTCAAATGATGTTCCTAAAAATACAAATGCAAAGACCAAGGGAGCTTCAGGTGCAAAAACGGAAAATGTGTTCGATTCTTTTGAAGTGCTGGAGAAATTCTCAGGGGCATCATTAGTGGGGACAAAGTATGAACCATTATTTGATTATTTCAAGGAGTTATCTGAAACAGCTTTTAGAGTTGTTGCCGACAATTATGTTACTGATGATAGTGGTACTGGTGTTGTCCATTGTGCACCTGCTTTTGGTGAAGACGATTTTCGTGTTTGCATTGATAATCAAATTATTAGCAAGGATAATCTAACTGTAGCTGTTGATGATGATGGCTGCTTTACTGAAAAAATTACCGATTTTAGTGGTTGCTACATCAAACAGGCAGACAAAGATATTGTTGAAGCTGTGAAGATGAAACAAGAGAAAAGTATTGATATTTTTGGCTGGGAGTGCATAGCTGTTCCAAGCTGTACTCATGCAATCATGTTGCCTTCCATATCATGTTTTCTTTTCAGTGGTGTATGGGTTCTAGCTGTTAAAAACTATGGTGGTGGTGTGCAGTTTGTTAGAGTTGAGTTGTTGAAAGAGCAATTGTTGGAAAACAATAAGCAGACATACTGGGTCCCTGATTTTGTCAAGGATAAGAGATTTCACAATTGGCTGGAAAATGCAAGAGATTGGGCAATTAGTCGTAGTAGATTTTGGGGGACCCCTCTCCCTTTATGGATTAGTGAGGATGAGAAGGAAATAGTTGTCATAGATTCGGTTGCAAAACTTGAAGAACTTTCAGGTGTAAAGGTGTTTGACCTTCATCGTCACAATATTGATCATATTACAATTAAATCTGCCAGTGGTCGTGTACTTCGACGTGTTGATGATGTGTTTGACTGCTGGTTTGAGAGTGGATCTATGCCGTATGCATATATACATTATCCTTTTGAAAATGTTGAGCTGTTTGAGAAGAATTTTCCAGGACATTTTGTTGCTGAGGGGCTGGATCAAACACGTGGTTGGTTTTATACACTTATGGTGCTGGCTACTGCATTATTTGGCAAGCCTGCATTTAGGAATCTGATCTGCAATGGACTTGTCCTGGCTGAAGATGGGAAAAAGATGAGTAAAAGCTTGAAAAATTATCCTTCACCAATGGAAGTTATTGATGATTATGGAGCGGATGCCTTGCGACTGTACCTTATCAACTCTCCTGTTGTGCGTGCTGAGCCACTTCGTTTCAAGAAGGAAGGAGTTTATGGTGTTGTTAGGGATGTTTTCCTTCCTTGGTATAATGCATATCGGTTCCTTGTGCAAAATGCAAAGAGGCTTGAAGTTGAAGGTCTAGCATCTTTTATTCCCTTTGATCAGGCGACACTTTTGAAGTCATCAAATGTTCTTGATCAATGGATTAACTCAGCCACCCAAAGTCTTATTCATTTTGTCCGACAAGAAATGGGTGGTTACCGCCTTTACACGGTCGTTCCGTATCTTTTGAAATTTCTTGATAACCTTACAAATATTTATGTAAGGTTCAACCGTAAGAGACTTAAAGGTCGTTCTGGGGAAGAAGACTGCAGGATAGCACTGTCAACACTTTACAATGTGCTTTTGTTATCATGTAAAGTAATGGCTCCTTTTACACCTTTCTTCACTGAGGTGCTCTATCAAAATATGCGAAAAGTTTGTAATGGATCAGAGGAAAGCATACACTATTGTAGTTTTCCTACGGAGGAAGGAAAGAGGGGAGAACGAATTGAGCAGAGTGTTTCAAGGATGATGACAATAATTGATCTTGCCAGAAATATTCGTGAGCGGCACAATAAGCCTCTTAAGACTCCTCTTAGGGAGATGGTTATAGTTCACCCCGATAAAGACTTCCTTGATGACATAAATGGAAAATTGAAGGAGTATGTGCTGGAGGAACTCAATGTGCGGTCCCTTGTTCCATGTAATGATACTTTAAAATACGCATCTTTACGTGCCGAGCCTGAATTTAGTGTTTTAGGTAAGAGACTAGGAAAATCCATGGGCATTGTTGCCAAAGAAATCAAAGCAATGTCACAGGAAAATATTTTGGCTTTTGAGAAGGCTGGAGAAGTTGTCATTGCTAATCAGTGTTTGAAGCTAACTGATATTAAGGTTCTCCGTGATTTTAAACGACCAGATGGTATGACTGAGAAGGAGGTTGATGCTGCTGGAGATGGTGATGTTCTAATTGTTAATAGAATTCAGAAGTTACGGAAGAAAGTTGCTCTTGAGCCAACTGACATGGTGGAGGTTTACTTCGAATCATTAGATGATGACAAATCAGTCACTCAGAGGGTTTTGCATTCACAGGAATCCTACATCAGAGATGCTATTGGTACTCAGTTGCTTCCGAATACTCTGATGCCTGCCCATTCAGTGGTCCTTGGTGAAGAGAGGTTCCATGGGATAGCCAACATGTCATTTGGTATCACTTTGACAAGACCAGCATTAATGTTGAACAAAAAAGCCATTCTTTCACTGTTTACAGGTGACACAAAAAGTGCACATAATTTGCAGACTTACCTGCTATCAAGAGATCATTCGAAGTTAAAGTCTGAGTTTCAAGATGGAAATGGAAAGAAAATTGTTGATTCAATTGAACAGCAAGCTGCTGTGGAAGTGGTTGTTGGAGAAAACGTCTTTCTCACTGTGGGGGACTATTACCTTGCTGGAAAATCTGAATAATTGCGTTCCAAGAGTTTCCTTTTTGATCTTTTATCCAATTCGCATGCTATTATATTATCTCTTTTCTTGATTCGGAACACAGAATATACCCAGGCATGCCTAATTGTATCAGCAATTGACAATCATTATTTTTTTCTGTATAGAAGATCTCAGGTCTTTATTTAAAAGATAAAAATAGGTGTTTTGTGGAATCCTTGATAATTCGAAATCAATTATTGTCATA 3831 0.4176 MEDVCEGKDFTFSKQEEKILDLWSEIDAFHTQLSLTKDKPEYIFYDGPPFATGLPHYGHILAGTIKDIVTRYHSMTGHHVTRRFGWDCHGLPVENEIDKKLGIKKREDVLKLGIDKYNEECRSIVTRYVSEWESVITRTGRWIDFKNDYKTMDLNFMESVWWVFSQLYAKNLVYKGFKVMPYSTGCKTPLSNFEAGQNYKDVSDPEVFMTFPLVGDPHGASFVAWTTTPWTLPSNLALCINANFTYVKVLNKYSGKVYIVAESRLSAIHNPKEKAKETVVNSSNDVPKNTNAKTKGASGAKTENVFDSFEVLEKFSGASLVGTKYEPLFDYFKELSETAFRVVADNYVTDDSGTGVVHCAPAFGEDDFRVCIDNQIISKDNLTVAVDDDGCFTEKITDFSGCYIKQADKDIVEAVKMKQEKSIDIFGWECIAVPSCTHAIMLPSISCFLFSGVWVLAVKNYGGGVQFVRVELLKEQLLENNKQTYWVPDFVKDKRFHNWLENARDWAISRSRFWGTPLPLWISEDEKEIVVIDSVAKLEELSGVKVFDLHRHNIDHITIKSASGRVLRRVDDVFDCWFESGSMPYAYIHYPFENVELFEKNFPGHFVAEGLDQTRGWFYTLMVLATALFGKPAFRNLICNGLVLAEDGKKMSKSLKNYPSPMEVIDDYGADALRLYLINSPVVRAEPLRFKKEGVYGVVRDVFLPWYNAYRFLVQNAKRLEVEGLASFIPFDQATLLKSSNVLDQWINSATQSLIHFVRQEMGGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRSGEEDCRIALSTLYNVLLLSCKVMAPFTPFFTEVLYQNMRKVCNGSEESIHYCSFPTEEGKRGERIEQSVSRMMTIIDLARNIRERHNKPLKTPLREMVIVHPDKDFLDDINGKLKEYVLEELNVRSLVPCNDTLKYASLRAEPEFSVLGKRLGKSMGIVAKEIKAMSQENILAFEKAGEVVIANQCLKLTDIKVLRDFKRPDGMTEKEVDAAGDGDVLIVNRIQKLRKKVALEPTDMVEVYFESLDDDKSVTQRVLHSQESYIRDAIGTQLLPNTLMPAHSVVLGEERFHGIANMSFGITLTRPALMLNKKAILSLFTGDTKSAHNLQTYLLSRDHSKLKSEFQDGNGKKIVDSIEQQAAVEVVVGENVFLTVGDYYLAGKSE 1180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00927 1180 SUPERFAMILY Nucleotidylyl transferase 10 700 - -
Pste1g00927 1180 Gene3D - 208 426 IPR009008 GO:0002161|GO:0006418
Pste1g00927 1180 Pfam Anticodon-binding domain of tRNA ligase 744 893 IPR013155 GO:0004812|GO:0006418
Pste1g00927 1180 Pfam tRNA synthetases class I (I, L, M and V) 19 276 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste1g00927 1180 Pfam tRNA synthetases class I (I, L, M and V) 307 686 IPR002300 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste1g00927 1180 CDD Anticodon_Ia_Ile_ABEc 690 877 IPR033709 GO:0000049
Pste1g00927 1180 Gene3D - 692 884 - -
Pste1g00927 1180 CDD IleRS_core 467 690 - -
Pste1g00927 1180 PRINTS Isoleucyl-tRNA synthetase signature 42 53 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pste1g00927 1180 PRINTS Isoleucyl-tRNA synthetase signature 609 618 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pste1g00927 1180 PRINTS Isoleucyl-tRNA synthetase signature 223 246 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pste1g00927 1180 PRINTS Isoleucyl-tRNA synthetase signature 569 582 IPR002301 GO:0000166|GO:0004822|GO:0005524|GO:0006428
Pste1g00927 1180 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 705 953 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste1g00927 1180 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 49 60 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Pste1g00927 1180 Gene3D HUPs 4 207 IPR014729 -
Pste1g00927 1180 Gene3D HUPs 464 687 IPR014729 -
Pste1g00927 1180 PANTHER SOLEUCYL-TRNA SYNTHETASE 1 1096 IPR023586 GO:0004822
Pste1g00927 1180 Pfam Domain of unknown function (DUF5915) 913 980 - -
Pste1g00927 1180 FunFam Isoleucine--tRNA ligase cytoplasmic 692 884 - -
Pste1g00927 1180 SUPERFAMILY ValRS/IleRS/LeuRS editing domain 201 416 IPR009008 GO:0002161|GO:0006418
Pste1g00927 1180 MobiDBLite consensus disorder prediction 277 297 - -
Pste1g00927 1180 MobiDBLite consensus disorder prediction 280 297 - -
Pste1g00927 1180 FunFam Isoleucyl-tRNA synthetase,cytoplasmic 4 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00927 Pste-Chr1 2894541 2919616 Dispersed