Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste1g00924 TGTGAACTGTGAAATATGGCTACACAACAATCTCCGTTAGACAAGCCTAGAAAATCCGTTTCCAAAGCCACATGGTTAATCCTTTCTATTGTTGTTGTGTTAAGTTCATCAATTATTATTGCTTCTCATCTCATAAAACCCACCTCGTTCTTTAACCTTAACCACAACCTAGTTCACCATGTTTGTGATGCTGCATTTGATACCCCCACATGCTTAGCACACGTTCTAGAAGTGACAAAAGACCCCAAATTCCATTTACTCCAATCCTTTCTAATCAAATTGATCTCACAGATTGAAAAAGTGATAGAAAAAGGCAAAGGTACGAAATTGAGGATGAATGGTAATCCAAGAGAGGAAGCAGCAATGCAGGACTGTGTAGAGTTGATGGAGTTGTCAGTGGAGAGAGTTTGGCACTCAATGATGAGTCTAACAAAAGATAGAACGCAAGTGGAAGATGCACACACATGGCTAAGCAGTGTGCTCACGAATCATGGAACATGTTTGGATGAATTGGAAGAGAAGGGTAAGAGGGTTATGGAAGCTGATCTTCAAGATTTGATATCAAGGGCAAGAACCTCTCTAGCCTTGCTGGTTACTGTTTTGCCTCCTGACCCGAAGCTTGAACAAGTTGTTGGTGGAGACTTTGAGATGGATAGGAGGCTGTTGGAGTCGTCGGCAGCAGACATCAAGGCGGACGTTGTGGTGGCTGCCGATGGAAGTGGCGACTTCAAGACTGTGGTGGAGGCTGTGGCATCTGCACCAAACAAGAGCAAGACAAGGTACATTATTTATGTCAAAAAAGGAACCTATAAAGAGAACGTTGAAATTGGTAAGAAAAAGAAAAATCTGATGCTGCTCGGCGACGGCATGAATTCAACTGTAATAACTGGGAACTTGAATTATATAGACGGAACAACCACTTTCAGGACTGCTACTGTTGCTGCAGTTGGAGATGGTTTTATAGCCCAAGACATTTGGTTTCAAAACACAGCAGGCCCACAAAAGCACCAAGCTGTGGCTCTTCGCGTTGGCGCTGACCGCTCCATCATAAACCGTTGTCGCATTGATGCATTCCAAGACACTCTTTATGCACACTCCAATAGACAATTCTATCGTGACTCCTTAATCACAGGTACCATTGACTTCATCTTTGGAAACGCAGCTGTTGTGTTCCAAAGGTGTAAACTCGAGGCCCGAAAGCCCATGAAAAATCAGAAAAACATGGTAACAGCTCAAGGACGAATAGACCCAAACCAAAACACAGGAATTTCAATTCAACAATGTGACATAACACCAAGTTCAGATCTTGAGCCTGTCATGGATTCTTTCAAAACTTATTTGGGTCGTCCTTGGAAGAACTTCTCAAGAACAGTAGTCATGCAATCTTTTATAGATAGCCATATTGATCCAATGGGATGGGCAGAATGGGATGACCAACATAAAGATTATTTGAAAACATTGTATTATGGAGAGTATATGAACAGAGGACCAGGCGCTGGTACTAGCAAAAGAGTGAATTGGCCTGGTTATCATATCATCACAACTGCAGCAGAGGCCAATAGCTTCACAGTAAAACAACTCATACAAGGTGATGCATGGTTGAATAACACAGGAGTGAACTTCATTGAAGGCTTGTAAATAAATATCAACTTTGGAGAGTGTGTTATTGTCTATGAGGCAAGTGGAGTTTTACATCAAATAAAATAGATAATAACTGTTACATGTCACAGTGAGGTCTTAGAAATTTGTTTAGACAGATTTCGCCTTAATGGCCATGTAATATATTATCATCATTATATATAAAG 1805 0.4116 MATQQSPLDKPRKSVSKATWLILSIVVVLSSSIIIASHLIKPTSFFNLNHNLVHHVCDAAFDTPTCLAHVLEVTKDPKFHLLQSFLIKLISQIEKVIEKGKGTKLRMNGNPREEAAMQDCVELMELSVERVWHSMMSLTKDRTQVEDAHTWLSSVLTNHGTCLDELEEKGKRVMEADLQDLISRARTSLALLVTVLPPDPKLEQVVGGDFEMDRRLLESSAADIKADVVVAADGSGDFKTVVEAVASAPNKSKTRYIIYVKKGTYKENVEIGKKKKNLMLLGDGMNSTVITGNLNYIDGTTTFRTATVAAVGDGFIAQDIWFQNTAGPQKHQAVALRVGADRSIINRCRIDAFQDTLYAHSNRQFYRDSLITGTIDFIFGNAAVVFQRCKLEARKPMKNQKNMVTAQGRIDPNQNTGISIQQCDITPSSDLEPVMDSFKTYLGRPWKNFSRTVVMQSFIDSHIDPMGWAEWDDQHKDYLKTLYYGEYMNRGPGAGTSKRVNWPGYHIITTAAEANSFTVKQLIQGDAWLNNTGVNFIEGL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste1g00924 540 CDD PMEI-like_4 44 195 - -
Pste1g00924 540 Gene3D - 221 540 IPR012334 -
Pste1g00924 540 ProSitePatterns Pectinesterase signature 1. 252 271 IPR018040 -
Pste1g00924 540 Gene3D Invertase/pectin methylesterase inhibitor family protein 48 195 IPR035513 -
Pste1g00924 540 NCBIfam pectinesterase inhibitor domain 23 174 IPR006501 GO:0004857
Pste1g00924 540 SUPERFAMILY Pectin lyase-like 224 539 IPR011050 -
Pste1g00924 540 FunFam Pectinesterase 221 540 - -
Pste1g00924 540 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 51 191 IPR035513 -
Pste1g00924 540 Pfam Pectinesterase 227 526 IPR000070 GO:0030599|GO:0042545
Pste1g00924 540 SMART PMEI_2 48 191 IPR006501 GO:0004857
Pste1g00924 540 PANTHER PECTINESTERASE 28 530 - -
Pste1g00924 540 Pfam Plant invertase/pectin methylesterase inhibitor 51 182 IPR006501 GO:0004857
Pste1g00924 540 ProSitePatterns Pectinesterase signature 2. 371 380 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste1g00924 Pste-Chr1 2881724 2884501 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste1g00924 3 540 Carbohydrate Esterase AT1G11580 54.011 0.0 582